RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 IGKV4-1P06312 121 aa6.72□□□□□ -1.33
RTN3-207ENST00000536011 PSMB2P49721 201 aa6.72□□□□□ -1.33
RTN3-207ENST00000536011 LINC00313P59037 77 aa6.72□□□□□ -1.33
RTN3-207ENST00000536011 HSD52Q0P140 79 aa6.7□□□□□ -1.34
RTN3-207ENST00000536011 TRACP01848 142 aa6.69□□□□□ -1.34
RTN3-207ENST00000536011 A0A1B0GV72 72 aa6.68□□□□□ -1.34
RTN3-207ENST00000536011 CCKP06307 115 aa6.68□□□□□ -1.34
RTN3-207ENST00000536011 FAM236DA0A1B0GTK5 79 aa6.67□□□□□ -1.34
RTN3-207ENST00000536011 FAM236CP0DP71 79 aa6.67□□□□□ -1.34
RTN3-207ENST00000536011 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
RTN3-207ENST00000536011 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
RTN3-207ENST00000536011 K7ERJ3 54 aa6.65□□□□□ -1.34
RTN3-207ENST00000536011 UBE2V1Q13404 147 aa6.65□□□□□ -1.34
RTN3-207ENST00000536011 IGHV6-1A0A0B4J1U7 121 aa6.64□□□□□ -1.35
RTN3-207ENST00000536011 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
RTN3-207ENST00000536011 C8orf87E5RJ46 101 aa6.62□□□□□ -1.35
RTN3-207ENST00000536011 DEFB116Q30KQ4 102 aa6.62□□□□□ -1.35
RTN3-207ENST00000536011 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
RTN3-207ENST00000536011 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
RTN3-207ENST00000536011 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
RTN3-207ENST00000536011 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
RTN3-207ENST00000536011 UQCR10Q9UDW1 63 aa6.61□□□□□ -1.35
RTN3-207ENST00000536011 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
RTN3-207ENST00000536011 RBM3P98179 157 aaKnown RBP6.6□□□□□ -1.35
RTN3-207ENST00000536011 A0A1B0GVX0 72 aa6.59□□□□□ -1.35
RTN3-207ENST00000536011 J3KT08 172 aa6.59□□□□□ -1.35
RTN3-207ENST00000536011 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
RTN3-207ENST00000536011 MTURNQ8N3F0 131 aa6.58□□□□□ -1.36
RTN3-207ENST00000536011 USH2AO75445 5202 aa6.57□□□□□ -1.36
RTN3-207ENST00000536011 MPLKIPQ8TAP9 179 aa6.57□□□□□ -1.36
RTN3-207ENST00000536011 HRES1P13985 223 aa6.56□□□□□ -1.36
RTN3-207ENST00000536011 C9JAW5 83 aa6.55□□□□□ -1.36
RTN3-207ENST00000536011 NDUFB1O75438 58 aa6.53□□□□□ -1.36
RTN3-207ENST00000536011 ZCCHC13Q8WW36 166 aaKnown RBP6.53□□□□□ -1.36
RTN3-207ENST00000536011 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
RTN3-207ENST00000536011 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
RTN3-207ENST00000536011 MT2AP02795 61 aa6.52□□□□□ -1.37
RTN3-207ENST00000536011 BAALC-AS2P0C853 105 aa6.52□□□□□ -1.37
RTN3-207ENST00000536011 Q6ZQT0 140 aa6.51□□□□□ -1.37
RTN3-207ENST00000536011 A0A1B0GW54 56 aa6.5□□□□□ -1.37
RTN3-207ENST00000536011 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
RTN3-207ENST00000536011 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
RTN3-207ENST00000536011 SPINK7P58062 85 aa6.48□□□□□ -1.37
RTN3-207ENST00000536011 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
RTN3-207ENST00000536011 PDE6GP18545 87 aa6.47□□□□□ -1.37
RTN3-207ENST00000536011 ATXN8Q156A1 80 aa6.47□□□□□ -1.37
RTN3-207ENST00000536011 LYRM7Q5U5X0 104 aa6.47□□□□□ -1.37
RTN3-207ENST00000536011 A8MWP4 228 aa6.46□□□□□ -1.38
RTN3-207ENST00000536011 M0R143 59 aa6.46□□□□□ -1.38
RTN3-207ENST00000536011 MT1FP04733 61 aa6.46□□□□□ -1.38
RTN3-207ENST00000536011 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
RTN3-207ENST00000536011 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
RTN3-207ENST00000536011 C8orf17Q9NRJ1 99 aa6.44□□□□□ -1.38
RTN3-207ENST00000536011 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
RTN3-207ENST00000536011 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
RTN3-207ENST00000536011 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
RTN3-207ENST00000536011 Q6ZVQ6 151 aa6.4□□□□□ -1.38
RTN3-207ENST00000536011 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
RTN3-207ENST00000536011 NREPQ16612 68 aa6.38□□□□□ -1.39
RTN3-207ENST00000536011 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
RTN3-207ENST00000536011 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
RTN3-207ENST00000536011 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
RTN3-207ENST00000536011 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
RTN3-207ENST00000536011 TMEM254Q8TBM7 123 aa6.35□□□□□ -1.39
RTN3-207ENST00000536011 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
RTN3-207ENST00000536011 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
RTN3-207ENST00000536011 MMP24-AS1A0A0U1RRL7 71 aa6.31□□□□□ -1.4
RTN3-207ENST00000536011 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
RTN3-207ENST00000536011 NDUFS5O43920 106 aa6.3□□□□□ -1.4
RTN3-207ENST00000536011 SMIM6P0DI80 62 aa6.3□□□□□ -1.4
RTN3-207ENST00000536011 H3BT86 120 aa6.28□□□□□ -1.4
RTN3-207ENST00000536011 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
RTN3-207ENST00000536011 TSTD3H0UI37 97 aa6.27□□□□□ -1.41
RTN3-207ENST00000536011 K7EQZ3 153 aa6.27□□□□□ -1.41
RTN3-207ENST00000536011 BATFQ16520 125 aa6.26□□□□□ -1.41
RTN3-207ENST00000536011 BPY2O14599 106 aa6.25□□□□□ -1.41
RTN3-207ENST00000536011 C7orf65Q6ZTY9 151 aa6.24□□□□□ -1.41
RTN3-207ENST00000536011 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
RTN3-207ENST00000536011 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
RTN3-207ENST00000536011 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
RTN3-207ENST00000536011 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
RTN3-207ENST00000536011 A0A1W2PPM0 123 aa6.2□□□□□ -1.42
RTN3-207ENST00000536011 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
RTN3-207ENST00000536011 CXCL6P80162 114 aa6.16□□□□□ -1.42
RTN3-207ENST00000536011 Q5W150 140 aa6.16□□□□□ -1.42
RTN3-207ENST00000536011 HCG22E2RYF7 251 aa6.15□□□□□ -1.42
RTN3-207ENST00000536011 TAX1BP3O14907 124 aa6.15□□□□□ -1.42
RTN3-207ENST00000536011 Q8N9L7 120 aa6.14□□□□□ -1.43
RTN3-207ENST00000536011 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
RTN3-207ENST00000536011 C4orf26Q17RF5 130 aa6.11□□□□□ -1.43
RTN3-207ENST00000536011 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
RTN3-207ENST00000536011 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
RTN3-207ENST00000536011 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
RTN3-207ENST00000536011 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
RTN3-207ENST00000536011 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
RTN3-207ENST00000536011 S4R3F8 94 aa6.04□□□□□ -1.44
RTN3-207ENST00000536011 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
RTN3-207ENST00000536011 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
RTN3-207ENST00000536011 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
RTN3-207ENST00000536011 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms