RNA–Protein interactions for RNA: ENST00000535887.1

C12orf4-204, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-204ENST00000535887 ABCC8Q09428 1581 aa0.03□□□□□ -2.4
C12orf4-204ENST00000535887 MMP24-AS1A0A0U1RRL7 71 aa0.03□□□□□ -2.4
C12orf4-204ENST00000535887 LINC01546A6NGU7 62 aa0.03□□□□□ -2.4
C12orf4-204ENST00000535887 MT1AP04731 61 aa0.03□□□□□ -2.4
C12orf4-204ENST00000535887 TNRC18O15417 2968 aaPredicted RBP0.02□□□□□ -2.41
C12orf4-204ENST00000535887 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
C12orf4-204ENST00000535887 MAP1BP46821 2468 aaKnown RBP0.02□□□□□ -2.41
C12orf4-204ENST00000535887 SPRR2EP22531 72 aa0.02□□□□□ -2.41
C12orf4-204ENST00000535887 WFDC10BQ8IUB3 73 aa0.02□□□□□ -2.41
C12orf4-204ENST00000535887 PRRC2CQ9Y520 2896 aaKnown RBP0.02□□□□□ -2.41
C12orf4-204ENST00000535887 BPTFQ12830 3046 aa0.02□□□□□ -2.41
C12orf4-204ENST00000535887 KMT2AQ03164 3969 aa0.02□□□□□ -2.41
C12orf4-204ENST00000535887 ABCA5Q8WWZ7 1642 aa0.01□□□□□ -2.41
C12orf4-204ENST00000535887 FLNAP21333 2647 aaKnown RBP0□□□□□ -2.41
C12orf4-204ENST00000535887 TFF3Q07654 80 aa0□□□□□ -2.41
C12orf4-204ENST00000535887 DCHS2Q6V1P9 2916 aa0□□□□□ -2.41
C12orf4-204ENST00000535887 SMIM2Q9BVW6 85 aa0□□□□□ -2.41
C12orf4-204ENST00000535887 SPTBN4Q9H254 2564 aa0□□□□□ -2.41
C12orf4-204ENST00000535887 SETD2Q9BYW2 2564 aaPredicted RBP-0□□□□□ -2.41
C12orf4-204ENST00000535887 LMO7Q8WWI1 1683 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 KIF21BO75037 1637 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 A8MTW9 85 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 M0QY20 66 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 TNP1P09430 55 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 DEFB110Q30KQ9 67 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 CREBBPQ92793 2442 aa-0.01□□□□□ -2.41
C12orf4-204ENST00000535887 NRXN3Q9Y4C0 1643 aa-0.02□□□□□ -2.41
C12orf4-204ENST00000535887 LRP2P98164 4655 aa-0.02□□□□□ -2.41
C12orf4-204ENST00000535887 LYSTQ99698 3801 aa-0.02□□□□□ -2.41
C12orf4-204ENST00000535887 SONP18583 2426 aaKnown RBP-0.02□□□□□ -2.41
C12orf4-204ENST00000535887 STAB1Q9NY15 2570 aa-0.02□□□□□ -2.41
C12orf4-204ENST00000535887 TENM2Q9NT68 2774 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 COL6A3P12111 3177 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 SVEP1Q4LDE5 3571 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 M0QZ58 72 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 DEFB131AP59861 70 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 SPRR2FQ96RM1 72 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 LRP1BQ9NZR2 4599 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 ZANQ9Y493 2812 aa-0.03□□□□□ -2.41
C12orf4-204ENST00000535887 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
C12orf4-204ENST00000535887 A0A1B0GUL6 1792 aa-0.04□□□□□ -2.42
C12orf4-204ENST00000535887 PKD1L2Q7Z442 2459 aa-0.04□□□□□ -2.42
C12orf4-204ENST00000535887 NF1P21359 2839 aa-0.04□□□□□ -2.42
C12orf4-204ENST00000535887 NBASA2RRP1 2371 aa-0.04□□□□□ -2.42
C12orf4-204ENST00000535887 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
C12orf4-204ENST00000535887 TOMM5Q8N4H5 51 aa-0.05□□□□□ -2.42
C12orf4-204ENST00000535887 ANKRD11Q6UB99 2663 aaPredicted RBP-0.05□□□□□ -2.42
C12orf4-204ENST00000535887 MAP1AP78559 2803 aaPredicted RBP-0.05□□□□□ -2.42
C12orf4-204ENST00000535887 CEP290O15078 2479 aa-0.06□□□□□ -2.42
C12orf4-204ENST00000535887 FAM208AQ9UK61 1670 aaKnown RBP-0.06□□□□□ -2.42
C12orf4-204ENST00000535887 PDZD2O15018 2839 aa-0.06□□□□□ -2.42
C12orf4-204ENST00000535887 CUBNO60494 3623 aa-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 IQGAP1P46940 1657 aa-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 KRTAP19-7Q3SYF9 63 aa-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 NBEAL1Q6ZS30 2694 aa-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 GCN1Q92616 2671 aaKnown RBP-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 DDX60Q8IY21 1712 aaKnown RBP-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 HIVEP1P15822 2718 aa-0.07□□□□□ -2.42
C12orf4-204ENST00000535887 DMXL1Q9Y485 3027 aa-0.08□□□□□ -2.42
C12orf4-204ENST00000535887 NDUFA1O15239 70 aa-0.08□□□□□ -2.42
C12orf4-204ENST00000535887 CLPSL2Q6UWE3 100 aa-0.08□□□□□ -2.42
C12orf4-204ENST00000535887 MTORP42345 2549 aa-0.08□□□□□ -2.42
C12orf4-204ENST00000535887 FLGP20930 4061 aaPredicted RBP-0.08□□□□□ -2.42
C12orf4-204ENST00000535887 TRPM2O94759 1503 aa-0.08□□□□□ -2.42
C12orf4-204ENST00000535887 KRTAP8-1Q8IUC2 63 aa-0.09□□□□□ -2.42
C12orf4-204ENST00000535887 VPS13BQ7Z7G8 4022 aa-0.09□□□□□ -2.42
C12orf4-204ENST00000535887 SRRM2Q9UQ35 2752 aaKnown RBP-0.09□□□□□ -2.42
C12orf4-204ENST00000535887 PKHD1P08F94 4074 aa-0.1□□□□□ -2.42
C12orf4-204ENST00000535887 PKD1P98161 4303 aa-0.1□□□□□ -2.43
C12orf4-204ENST00000535887 SACSQ9NZJ4 4579 aa-0.1□□□□□ -2.43
C12orf4-204ENST00000535887 MUC2Q02817 5179 aa-0.1□□□□□ -2.43
C12orf4-204ENST00000535887 NFAT5O94916 1531 aa-0.1□□□□□ -2.43
C12orf4-204ENST00000535887 FAT3Q8TDW7 4589 aa-0.1□□□□□ -2.43
C12orf4-204ENST00000535887 STAB2Q8WWQ8 2551 aa-0.11□□□□□ -2.43
C12orf4-204ENST00000535887 TACC2O95359 2948 aa-0.11□□□□□ -2.43
C12orf4-204ENST00000535887 IQGAP2Q13576 1575 aa-0.11□□□□□ -2.43
C12orf4-204ENST00000535887 DNAH9Q9NYC9 4486 aa-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 TGP01266 2768 aa-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 KRTAP19-5Q3LI72 72 aa-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 SPG11Q96JI7 2443 aa-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 FASNP49327 2511 aaKnown RBP-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 TEP1Q99973 2627 aaKnown RBP-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 ANK3Q12955 4377 aaKnown RBP-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 UTP20O75691 2785 aaKnown RBP-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
C12orf4-204ENST00000535887 SMR3BP02814 79 aaPredicted RBP-0.13□□□□□ -2.43
C12orf4-204ENST00000535887 SPART-AS1P0CW21 52 aa-0.13□□□□□ -2.43
C12orf4-204ENST00000535887 POLR2KP53803 58 aaKnown RBP-0.13□□□□□ -2.43
C12orf4-204ENST00000535887 KRTAP19-8Q3LI54 63 aa-0.13□□□□□ -2.43
C12orf4-204ENST00000535887 NBEAQ8NFP9 2946 aa-0.13□□□□□ -2.43
C12orf4-204ENST00000535887 LAMA5O15230 3695 aa-0.13□□□□□ -2.43
C12orf4-204ENST00000535887 EPG5Q9HCE0 2579 aa-0.14□□□□□ -2.43
C12orf4-204ENST00000535887 DEFB1P60022 68 aa-0.14□□□□□ -2.43
C12orf4-204ENST00000535887 CLTCL1P53675 1640 aa-0.14□□□□□ -2.43
C12orf4-204ENST00000535887 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.14□□□□□ -2.43
C12orf4-204ENST00000535887 PKHD1L1Q86WI1 4243 aa-0.14□□□□□ -2.43
C12orf4-204ENST00000535887 MXRA5Q9NR99 2828 aa-0.14□□□□□ -2.43
C12orf4-204ENST00000535887 PCLOQ9Y6V0 5065 aa-0.15□□□□□ -2.43
C12orf4-204ENST00000535887 LRRK2Q5S007 2527 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms