RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 WFDC13Q8IUB5 93 aa13.64□□□□□ -0.23
PTPMT1-205ENST00000534775 PKHD1L1Q86WI1 4243 aa13.63□□□□□ -0.23
PTPMT1-205ENST00000534775 IGHV6-1A0A0B4J1U7 121 aa13.62□□□□□ -0.23
PTPMT1-205ENST00000534775 MMP24-AS1A0A0U1RRL7 71 aa13.61□□□□□ -0.23
PTPMT1-205ENST00000534775 KRTAP29-1A8MX34 341 aaPredicted RBP13.61□□□□□ -0.23
PTPMT1-205ENST00000534775 CCDC179H3BU77 68 aa13.61□□□□□ -0.23
PTPMT1-205ENST00000534775 C8orf17Q9NRJ1 99 aa13.6□□□□□ -0.23
PTPMT1-205ENST00000534775 OCR1Q9BZK8 76 aa13.58□□□□□ -0.24
PTPMT1-205ENST00000534775 hDV103S1A0JD37 113 aa13.57□□□□□ -0.24
PTPMT1-205ENST00000534775 C8orf87E5RJ46 101 aa13.53□□□□□ -0.24
PTPMT1-205ENST00000534775 BIRC6Q9NR09 4857 aa13.5□□□□□ -0.25
PTPMT1-205ENST00000534775 KRTAP10-8P60410 259 aa13.5□□□□□ -0.25
PTPMT1-205ENST00000534775 TMEM254Q8TBM7 123 aa13.47□□□□□ -0.25
PTPMT1-205ENST00000534775 NOTCH2NLQ7Z3S9 236 aa13.46□□□□□ -0.26
PTPMT1-205ENST00000534775 MRPL34Q9BQ48 92 aaKnown RBP13.44□□□□□ -0.26
PTPMT1-205ENST00000534775 LINC00313P59037 77 aa13.43□□□□□ -0.26
PTPMT1-205ENST00000534775 C20orf197Q8N268 126 aa13.42□□□□□ -0.26
PTPMT1-205ENST00000534775 C5orf47Q569G3 176 aa13.39□□□□□ -0.27
PTPMT1-205ENST00000534775 TP53AIP1Q9HCN2 124 aa13.39□□□□□ -0.27
PTPMT1-205ENST00000534775 NDUFS5O43920 106 aa13.35□□□□□ -0.27
PTPMT1-205ENST00000534775 KLKP1Q107X0 134 aa13.35□□□□□ -0.27
PTPMT1-205ENST00000534775 KRTAP4-5Q9BYR2 181 aa13.35□□□□□ -0.27
PTPMT1-205ENST00000534775 LRP1Q07954 4544 aaKnown RBP13.34□□□□□ -0.27
PTPMT1-205ENST00000534775 MP68P56378 58 aa13.31□□□□□ -0.28
PTPMT1-205ENST00000534775 FAT3Q8TDW7 4589 aa13.31□□□□□ -0.28
PTPMT1-205ENST00000534775 HERC2O95714 4834 aa13.3□□□□□ -0.28
PTPMT1-205ENST00000534775 A0A0U1RQV1 116 aa13.3□□□□□ -0.28
PTPMT1-205ENST00000534775 SNURFQ9Y675 71 aa13.3□□□□□ -0.28
PTPMT1-205ENST00000534775 OXTP01178 125 aa13.29□□□□□ -0.28
PTPMT1-205ENST00000534775 TRAV22A0A0B4J277 110 aa13.26□□□□□ -0.29
PTPMT1-205ENST00000534775 H0Y9P7 68 aa13.26□□□□□ -0.29
PTPMT1-205ENST00000534775 MT1HL1P0DM35 61 aa13.26□□□□□ -0.29
PTPMT1-205ENST00000534775 CYSTM1Q9H1C7 97 aa13.26□□□□□ -0.29
PTPMT1-205ENST00000534775 KRTAP16-1A8MUX0 517 aa13.25□□□□□ -0.29
PTPMT1-205ENST00000534775 FLG2Q5D862 2391 aaPredicted RBP13.25□□□□□ -0.29
PTPMT1-205ENST00000534775 H3BPC8 53 aa13.24□□□□□ -0.29
PTPMT1-205ENST00000534775 Q8N9P0 234 aaPredicted RBP13.24□□□□□ -0.29
PTPMT1-205ENST00000534775 RETNLBQ9BQ08 111 aa13.24□□□□□ -0.29
PTPMT1-205ENST00000534775 NDUFC1O43677 76 aa13.24□□□□□ -0.29
PTPMT1-205ENST00000534775 TNXBP22105 4242 aa13.23□□□□□ -0.29
PTPMT1-205ENST00000534775 MYCBP2O75592 4640 aa13.22□□□□□ -0.29
PTPMT1-205ENST00000534775 ZCCHC13Q8WW36 166 aaKnown RBP13.18□□□□□ -0.3
PTPMT1-205ENST00000534775 LINC00208Q96KT6 92 aa13.18□□□□□ -0.3
PTPMT1-205ENST00000534775 FP248Q71RG6 208 aaPredicted RBP13.17□□□□□ -0.3
PTPMT1-205ENST00000534775 H7BZZ5 65 aa13.16□□□□□ -0.3
PTPMT1-205ENST00000534775 TMEM258P61165 79 aa13.16□□□□□ -0.3
PTPMT1-205ENST00000534775 ABCA13Q86UQ4 5058 aa13.13□□□□□ -0.31
PTPMT1-205ENST00000534775 C1orf64Q8NEQ6 169 aa13.13□□□□□ -0.31
PTPMT1-205ENST00000534775 C9orf92A6NGG3 77 aa13.1□□□□□ -0.31
PTPMT1-205ENST00000534775 Q5W150 140 aa13.07□□□□□ -0.32
PTPMT1-205ENST00000534775 KRTAP13-3Q3SY46 172 aa13.06□□□□□ -0.32
PTPMT1-205ENST00000534775 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.33
PTPMT1-205ENST00000534775 LOC101927531A0A1B0GV80 90 aa13.02□□□□□ -0.33
PTPMT1-205ENST00000534775 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.33
PTPMT1-205ENST00000534775 IGLV7-46A0A075B6I9 117 aa13.01□□□□□ -0.33
PTPMT1-205ENST00000534775 A8MUU9 505 aa13□□□□□ -0.33
PTPMT1-205ENST00000534775 FAM236DA0A1B0GTK5 79 aa12.99□□□□□ -0.33
PTPMT1-205ENST00000534775 FAM236CP0DP71 79 aa12.99□□□□□ -0.33
PTPMT1-205ENST00000534775 ATP5EP56381 51 aaPredicted RBP12.98□□□□□ -0.33
PTPMT1-205ENST00000534775 J3QL48 77 aa12.91□□□□□ -0.34
PTPMT1-205ENST00000534775 PRR4Q16378 134 aa12.91□□□□□ -0.34
PTPMT1-205ENST00000534775 Q75L30 129 aa12.91□□□□□ -0.34
PTPMT1-205ENST00000534775 CYP4F30PQ9H0H9 118 aa12.88□□□□□ -0.35
PTPMT1-205ENST00000534775 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
PTPMT1-205ENST00000534775 PCOTHQ58A44 107 aa12.88□□□□□ -0.35
PTPMT1-205ENST00000534775 SPANXA2-OT1Q8N9U9 137 aa12.87□□□□□ -0.35
PTPMT1-205ENST00000534775 IGKV2D-30A0A075B6S6 120 aa12.79□□□□□ -0.36
PTPMT1-205ENST00000534775 XP32Q5T750 250 aa12.79□□□□□ -0.36
PTPMT1-205ENST00000534775 TPRXLQ17RH7 258 aa12.77□□□□□ -0.36
PTPMT1-205ENST00000534775 PCLOQ9Y6V0 5065 aa12.76□□□□□ -0.37
PTPMT1-205ENST00000534775 RPL37P61927 97 aaKnown RBP12.76□□□□□ -0.37
PTPMT1-205ENST00000534775 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
PTPMT1-205ENST00000534775 RPS28P62857 69 aaKnown RBP12.74□□□□□ -0.37
PTPMT1-205ENST00000534775 SERP1Q9Y6X1 66 aa12.74□□□□□ -0.37
PTPMT1-205ENST00000534775 ATP11AUNQ6ZP68 121 aa12.73□□□□□ -0.37
PTPMT1-205ENST00000534775 HRES1P13985 223 aa12.68□□□□□ -0.38
PTPMT1-205ENST00000534775 SPINK7P58062 85 aa12.59□□□□□ -0.39
PTPMT1-205ENST00000534775 DMAC1Q96GE9 116 aa12.52□□□□□ -0.4
PTPMT1-205ENST00000534775 ACYP2P14621 99 aa12.48□□□□□ -0.41
PTPMT1-205ENST00000534775 COA5Q86WW8 74 aa12.47□□□□□ -0.41
PTPMT1-205ENST00000534775 C4orf26Q17RF5 130 aa12.43□□□□□ -0.42
PTPMT1-205ENST00000534775 HERC1Q15751 4861 aa12.43□□□□□ -0.42
PTPMT1-205ENST00000534775 SMIM26A0A096LP01 95 aa12.42□□□□□ -0.42
PTPMT1-205ENST00000534775 A8MUN3 132 aa12.4□□□□□ -0.42
PTPMT1-205ENST00000534775 LPAP08519 4548 aa12.4□□□□□ -0.43
PTPMT1-205ENST00000534775 SEC61BP60468 96 aaKnown RBP12.36□□□□□ -0.43
PTPMT1-205ENST00000534775 COX6B2Q6YFQ2 88 aa12.3□□□□□ -0.44
PTPMT1-205ENST00000534775 CHKB-CPT1BH3BT56 60 aa12.29□□□□□ -0.44
PTPMT1-205ENST00000534775 LRP2P98164 4655 aa12.28□□□□□ -0.44
PTPMT1-205ENST00000534775 HMCN2Q8NDA2 5059 aa12.25□□□□□ -0.45
PTPMT1-205ENST00000534775 KRTAP3-1Q9BYR8 98 aa12.23□□□□□ -0.45
PTPMT1-205ENST00000534775 MPLKIPQ8TAP9 179 aa12.17□□□□□ -0.46
PTPMT1-205ENST00000534775 Q1T7F1 81 aa12.15□□□□□ -0.46
PTPMT1-205ENST00000534775 V9GYY9 64 aa12.15□□□□□ -0.46
PTPMT1-205ENST00000534775 RBM12B-AS1Q9P1G2 102 aa12.11□□□□□ -0.47
PTPMT1-205ENST00000534775 SPTSSBQ8NFR3 76 aa12.07□□□□□ -0.48
PTPMT1-205ENST00000534775 LINC01558Q9Y6Z2 57 aa12□□□□□ -0.49
PTPMT1-205ENST00000534775 H1FX-AS1Q4G0G2 97 aa11.99□□□□□ -0.49
PTPMT1-205ENST00000534775 MUC17Q685J3 4493 aa11.98□□□□□ -0.49
PTPMT1-205ENST00000534775 KRTAP4-1Q9BYQ7 146 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms