RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 Q6ZRN7 208 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-237ENST00000534579 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
CTNND1-237ENST00000534579 ZZEF1O43149 2961 aa5.13□□□□□ -1.59
CTNND1-237ENST00000534579 ASB16-AS1Q495Z4 193 aa5.13□□□□□ -1.59
CTNND1-237ENST00000534579 CFAP47Q6ZTR5 3102 aa5.12□□□□□ -1.59
CTNND1-237ENST00000534579 SPEGQ15772 3267 aa5.11□□□□□ -1.59
CTNND1-237ENST00000534579 STAB2Q8WWQ8 2551 aa5.11□□□□□ -1.59
CTNND1-237ENST00000534579 A0A087X002 238 aa5.11□□□□□ -1.59
CTNND1-237ENST00000534579 CRYBG3Q68DQ2 2970 aa5.11□□□□□ -1.59
CTNND1-237ENST00000534579 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
CTNND1-237ENST00000534579 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
CTNND1-237ENST00000534579 TNP1P09430 55 aa5.05□□□□□ -1.6
CTNND1-237ENST00000534579 TENM4Q6N022 2769 aa5.05□□□□□ -1.6
CTNND1-237ENST00000534579 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
CTNND1-237ENST00000534579 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
CTNND1-237ENST00000534579 LOC400499M0QZD8 3231 aa5.03□□□□□ -1.6
CTNND1-237ENST00000534579 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
CTNND1-237ENST00000534579 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
CTNND1-237ENST00000534579 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
CTNND1-237ENST00000534579 ASH1LQ9NR48 2969 aaKnown RBP5.01□□□□□ -1.61
CTNND1-237ENST00000534579 CELSR2Q9HCU4 2923 aa5.01□□□□□ -1.61
CTNND1-237ENST00000534579 NIPBLQ6KC79 2804 aaeCLIP5□□□□□ -1.611e-6■□□□□ 9
CTNND1-237ENST00000534579 A6NN06 94 aa5□□□□□ -1.61
CTNND1-237ENST00000534579 A8MU10 97 aa4.99□□□□□ -1.61
CTNND1-237ENST00000534579 HRNRQ86YZ3 2850 aaPredicted RBP4.99□□□□□ -1.61
CTNND1-237ENST00000534579 DMBT1Q9UGM3 2413 aaPredicted RBP4.97□□□□□ -1.61
CTNND1-237ENST00000534579 MYO15AQ9UKN7 3530 aa4.97□□□□□ -1.61
CTNND1-237ENST00000534579 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
CTNND1-237ENST00000534579 FLG2Q5D862 2391 aaPredicted RBP4.97□□□□□ -1.61
CTNND1-237ENST00000534579 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
CTNND1-237ENST00000534579 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
CTNND1-237ENST00000534579 NOTCH2NLQ7Z3S9 236 aa4.96□□□□□ -1.62
CTNND1-237ENST00000534579 DCHS2Q6V1P9 2916 aa4.96□□□□□ -1.62
CTNND1-237ENST00000534579 A0A1B0GVY2 172 aa4.95□□□□□ -1.62
CTNND1-237ENST00000534579 KRTAP13-1Q8IUC0 172 aa4.95□□□□□ -1.62
CTNND1-237ENST00000534579 P0C880 135 aa4.93□□□□□ -1.62
CTNND1-237ENST00000534579 FBN2P35556 2912 aa4.88□□□□□ -1.63
CTNND1-237ENST00000534579 NF1P21359 2839 aa4.87□□□□□ -1.63
CTNND1-237ENST00000534579 RELNP78509 3460 aa4.85□□□□□ -1.63
CTNND1-237ENST00000534579 KRTAP10-10P60014 251 aa4.84□□□□□ -1.63
CTNND1-237ENST00000534579 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.64
CTNND1-237ENST00000534579 ASPMQ8IZT6 3477 aa4.78□□□□□ -1.64
CTNND1-237ENST00000534579 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
CTNND1-237ENST00000534579 DCHS1Q96JQ0 3298 aa4.78□□□□□ -1.64
CTNND1-237ENST00000534579 LAMA5O15230 3695 aa4.77□□□□□ -1.65
CTNND1-237ENST00000534579 MXRA5Q9NR99 2828 aa4.77□□□□□ -1.65
CTNND1-237ENST00000534579 CELSR1Q9NYQ6 3014 aa4.76□□□□□ -1.65
CTNND1-237ENST00000534579 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
CTNND1-237ENST00000534579 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
CTNND1-237ENST00000534579 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
CTNND1-237ENST00000534579 TENM2Q9NT68 2774 aa4.74□□□□□ -1.65
CTNND1-237ENST00000534579 NBPF19A0A087WUL8 3843 aa4.74□□□□□ -1.65
CTNND1-237ENST00000534579 DMDP11532 3685 aa4.71□□□□□ -1.65
CTNND1-237ENST00000534579 PDZD2O15018 2839 aa4.71□□□□□ -1.66
CTNND1-237ENST00000534579 XP32Q5T750 250 aa4.7□□□□□ -1.66
CTNND1-237ENST00000534579 MUC3AQ02505 3323 aa4.69□□□□□ -1.66
CTNND1-237ENST00000534579 ZFHX4Q86UP3 3567 aa4.69□□□□□ -1.66
CTNND1-237ENST00000534579 TENM3Q9P273 2699 aa4.69□□□□□ -1.66
CTNND1-237ENST00000534579 PKD1L1Q8TDX9 2849 aa4.63□□□□□ -1.67
CTNND1-237ENST00000534579 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
CTNND1-237ENST00000534579 CSMD1Q96PZ7 3565 aa4.62□□□□□ -1.67
CTNND1-237ENST00000534579 OTOGQ6ZRI0 2925 aa4.61□□□□□ -1.67
CTNND1-237ENST00000534579 ZFHX3Q15911 3703 aa4.58□□□□□ -1.68
CTNND1-237ENST00000534579 SMG1Q96Q15 3661 aaKnown RBP4.56□□□□□ -1.68
CTNND1-237ENST00000534579 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
CTNND1-237ENST00000534579 H0YAA0 97 aa4.56□□□□□ -1.68
CTNND1-237ENST00000534579 VWFP04275 2813 aa4.54□□□□□ -1.68
CTNND1-237ENST00000534579 FBN1P35555 2871 aaKnown RBP4.52□□□□□ -1.69
CTNND1-237ENST00000534579 TGP01266 2768 aa4.52□□□□□ -1.69
CTNND1-237ENST00000534579 ANK3Q12955 4377 aaKnown RBP4.52□□□□□ -1.69
CTNND1-237ENST00000534579 CSMD2Q7Z408 3487 aa4.46□□□□□ -1.7
CTNND1-237ENST00000534579 SPENQ96T58 3664 aaKnown RBP4.45□□□□□ -1.7
CTNND1-237ENST00000534579 SVEP1Q4LDE5 3571 aa4.42□□□□□ -1.7
CTNND1-237ENST00000534579 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
CTNND1-237ENST00000534579 BSNQ9UPA5 3926 aa4.4□□□□□ -1.71
CTNND1-237ENST00000534579 TRRAPQ9Y4A5 3859 aa4.37□□□□□ -1.71
CTNND1-237ENST00000534579 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
CTNND1-237ENST00000534579 CRCT1Q9UGL9 99 aa4.34□□□□□ -1.72
CTNND1-237ENST00000534579 CUBNO60494 3623 aa4.29□□□□□ -1.72
CTNND1-237ENST00000534579 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
CTNND1-237ENST00000534579 FBN3Q75N90 2809 aa4.27□□□□□ -1.73
CTNND1-237ENST00000534579 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
CTNND1-237ENST00000534579 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
CTNND1-237ENST00000534579 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
CTNND1-237ENST00000534579 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
CTNND1-237ENST00000534579 MEGF8Q7Z7M0 2845 aa4.2□□□□□ -1.74
CTNND1-237ENST00000534579 COL7A1Q02388 2944 aa4.19□□□□□ -1.74
CTNND1-237ENST00000534579 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
CTNND1-237ENST00000534579 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
CTNND1-237ENST00000534579 INE1O15225 51 aa4.14□□□□□ -1.75
CTNND1-237ENST00000534579 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
CTNND1-237ENST00000534579 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-237ENST00000534579 ALMS1Q8TCU4 4167 aa4.11□□□□□ -1.75
CTNND1-237ENST00000534579 AKAP9Q99996 3911 aa4.09□□□□□ -1.76
CTNND1-237ENST00000534579 ZNF469Q96JG9 3925 aaPredicted RBP4.08□□□□□ -1.76
CTNND1-237ENST00000534579 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
CTNND1-237ENST00000534579 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
CTNND1-237ENST00000534579 DNAH9Q9NYC9 4486 aa4.04□□□□□ -1.76
CTNND1-237ENST00000534579 KRTAP3-2Q9BYR7 98 aa3.96□□□□□ -1.78
CTNND1-237ENST00000534579 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms