RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 J3KT08 172 aa11.79□□□□□ -0.52
YIF1A-213ENST00000534374 NAA38Q9BRA0 125 aaKnown RBP11.79□□□□□ -0.52
YIF1A-213ENST00000534374 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
YIF1A-213ENST00000534374 Q6ZQT0 140 aa11.77□□□□□ -0.53
YIF1A-213ENST00000534374 LOC105371267A0A1B0GV96 52 aa11.76□□□□□ -0.53
YIF1A-213ENST00000534374 JMJD7-PLA2G4BH0Y9G9 81 aa11.75□□□□□ -0.53
YIF1A-213ENST00000534374 TSTD3H0UI37 97 aa11.74□□□□□ -0.53
YIF1A-213ENST00000534374 A0A1B0GW54 56 aa11.73□□□□□ -0.53
YIF1A-213ENST00000534374 MPLKIPQ8TAP9 179 aa11.73□□□□□ -0.53
YIF1A-213ENST00000534374 RBM12B-AS1Q9P1G2 102 aa11.71□□□□□ -0.53
YIF1A-213ENST00000534374 HRES1P13985 223 aa11.7□□□□□ -0.54
YIF1A-213ENST00000534374 KRTAP9-8Q9BYQ0 159 aa11.7□□□□□ -0.54
YIF1A-213ENST00000534374 LOC110117498A0A087WWA1 95 aa11.69□□□□□ -0.54
YIF1A-213ENST00000534374 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
YIF1A-213ENST00000534374 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
YIF1A-213ENST00000534374 PDE6GP18545 87 aa11.69□□□□□ -0.54
YIF1A-213ENST00000534374 NDUFB1O75438 58 aa11.68□□□□□ -0.54
YIF1A-213ENST00000534374 BATFQ16520 125 aa11.68□□□□□ -0.54
YIF1A-213ENST00000534374 ZCCHC13Q8WW36 166 aaKnown RBP11.63□□□□□ -0.55
YIF1A-213ENST00000534374 LYRM7Q5U5X0 104 aa11.62□□□□□ -0.55
YIF1A-213ENST00000534374 Q8N9P0 234 aaPredicted RBP11.62□□□□□ -0.55
YIF1A-213ENST00000534374 A8MWP4 228 aa11.6□□□□□ -0.55
YIF1A-213ENST00000534374 C14orf132Q9NPU4 83 aa11.57□□□□□ -0.56
YIF1A-213ENST00000534374 C8orf17Q9NRJ1 99 aa11.57□□□□□ -0.56
YIF1A-213ENST00000534374 MTURNQ8N3F0 131 aa11.56□□□□□ -0.56
YIF1A-213ENST00000534374 SPINK7P58062 85 aa11.55□□□□□ -0.56
YIF1A-213ENST00000534374 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
YIF1A-213ENST00000534374 C9orf118A6NHY6 69 aa11.53□□□□□ -0.56
YIF1A-213ENST00000534374 TAX1BP3O14907 124 aa11.52□□□□□ -0.57
YIF1A-213ENST00000534374 NREPQ16612 68 aa11.51□□□□□ -0.57
YIF1A-213ENST00000534374 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
YIF1A-213ENST00000534374 MT2AP02795 61 aa11.49□□□□□ -0.57
YIF1A-213ENST00000534374 Q6ZVQ6 151 aa11.48□□□□□ -0.57
YIF1A-213ENST00000534374 A0A1W2PPM0 123 aa11.47□□□□□ -0.57
YIF1A-213ENST00000534374 USH2AO75445 5202 aa11.45□□□□□ -0.58
YIF1A-213ENST00000534374 H3BT86 120 aa11.43□□□□□ -0.58
YIF1A-213ENST00000534374 SSPOA2VEC9 5147 aa11.42□□□□□ -0.58
YIF1A-213ENST00000534374 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.4□□□□□ -0.58
YIF1A-213ENST00000534374 MT1FP04733 61 aa11.39□□□□□ -0.59
YIF1A-213ENST00000534374 TMEM254Q8TBM7 123 aa11.39□□□□□ -0.59
YIF1A-213ENST00000534374 MRPL34Q9BQ48 92 aaKnown RBP11.38□□□□□ -0.59
YIF1A-213ENST00000534374 MMP24-AS1A0A0U1RRL7 71 aa11.37□□□□□ -0.59
YIF1A-213ENST00000534374 KRTAP9-7A8MTY7 169 aa11.37□□□□□ -0.59
YIF1A-213ENST00000534374 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
YIF1A-213ENST00000534374 WFDC13Q8IUB5 93 aa11.35□□□□□ -0.59
YIF1A-213ENST00000534374 hDV103S1A0JD37 113 aa11.33□□□□□ -0.6
YIF1A-213ENST00000534374 KRTAP9-3Q9BYQ3 159 aa11.33□□□□□ -0.6
YIF1A-213ENST00000534374 K7EQZ3 153 aa11.31□□□□□ -0.6
YIF1A-213ENST00000534374 SPCS1Q9Y6A9 102 aa11.31□□□□□ -0.6
YIF1A-213ENST00000534374 BPY2O14599 106 aa11.28□□□□□ -0.6
YIF1A-213ENST00000534374 LCE2BO14633 110 aa11.27□□□□□ -0.61
YIF1A-213ENST00000534374 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.61
YIF1A-213ENST00000534374 NDUFS5O43920 106 aa11.24□□□□□ -0.61
YIF1A-213ENST00000534374 SMCPP49901 116 aaPredicted RBP11.23□□□□□ -0.61
YIF1A-213ENST00000534374 FCGBPQ9Y6R7 5405 aaPredicted RBP11.21□□□□□ -0.62
YIF1A-213ENST00000534374 H1FX-AS1Q4G0G2 97 aa11.17□□□□□ -0.62
YIF1A-213ENST00000534374 K7EP34 96 aa11.15□□□□□ -0.62
YIF1A-213ENST00000534374 Q5W150 140 aa11.15□□□□□ -0.62
YIF1A-213ENST00000534374 PRO0461Q9UI25 63 aa11.15□□□□□ -0.62
YIF1A-213ENST00000534374 KRTAP19-1Q8IUB9 90 aa11.14□□□□□ -0.63
YIF1A-213ENST00000534374 CASC2Q6XLA1 102 aa11.13□□□□□ -0.63
YIF1A-213ENST00000534374 Q8N9L7 120 aa11.12□□□□□ -0.63
YIF1A-213ENST00000534374 IGKV2D-30A0A075B6S6 120 aa11.11□□□□□ -0.63
YIF1A-213ENST00000534374 PCP4L1A6NKN8 68 aa11.11□□□□□ -0.63
YIF1A-213ENST00000534374 IGKV2-30P06310 120 aa11.11□□□□□ -0.63
YIF1A-213ENST00000534374 C7orf65Q6ZTY9 151 aa11.11□□□□□ -0.63
YIF1A-213ENST00000534374 HCG22E2RYF7 251 aa11.07□□□□□ -0.64
YIF1A-213ENST00000534374 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
YIF1A-213ENST00000534374 CXCL6P80162 114 aa11.05□□□□□ -0.64
YIF1A-213ENST00000534374 UBL5Q9BZL1 73 aa11.05□□□□□ -0.64
YIF1A-213ENST00000534374 MACF1Q9UPN3 7388 aaKnown RBP11.02□□□□□ -0.65
YIF1A-213ENST00000534374 GTF2H5Q6ZYL4 71 aa11.02□□□□□ -0.65
YIF1A-213ENST00000534374 F8W1H4 67 aa10.94□□□□□ -0.66
YIF1A-213ENST00000534374 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
YIF1A-213ENST00000534374 SYNE2Q8WXH0 6885 aaKnown RBP10.93□□□□□ -0.66
YIF1A-213ENST00000534374 KRTAP19-6Q3LI70 58 aa10.92□□□□□ -0.66
YIF1A-213ENST00000534374 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
YIF1A-213ENST00000534374 TP53AIP1Q9HCN2 124 aa10.83□□□□□ -0.68
YIF1A-213ENST00000534374 KRTAP3-1Q9BYR8 98 aa10.8□□□□□ -0.68
YIF1A-213ENST00000534374 C1orf64Q8NEQ6 169 aa10.75□□□□□ -0.69
YIF1A-213ENST00000534374 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
YIF1A-213ENST00000534374 S4R3F8 94 aa10.71□□□□□ -0.69
YIF1A-213ENST00000534374 CSAG1Q6PB30 78 aa10.7□□□□□ -0.7
YIF1A-213ENST00000534374 LCA10Q71F78 164 aa10.64□□□□□ -0.71
YIF1A-213ENST00000534374 FAM236AA0A1B0GUQ0 79 aa10.63□□□□□ -0.71
YIF1A-213ENST00000534374 FAM236BA0A1B0GV22 79 aa10.63□□□□□ -0.71
YIF1A-213ENST00000534374 ACYP1P07311 99 aa10.63□□□□□ -0.71
YIF1A-213ENST00000534374 CYP4F30PQ9H0H9 118 aa10.61□□□□□ -0.71
YIF1A-213ENST00000534374 KRTAP6-3Q3LI67 103 aa10.6□□□□□ -0.71
YIF1A-213ENST00000534374 FAM240AA0A1B0GVK7 77 aa10.56□□□□□ -0.72
YIF1A-213ENST00000534374 TRAV22A0A0B4J277 110 aa10.53□□□□□ -0.72
YIF1A-213ENST00000534374 LOC101927531A0A1B0GV80 90 aa10.52□□□□□ -0.73
YIF1A-213ENST00000534374 SPRR2GQ9BYE4 73 aa10.52□□□□□ -0.73
YIF1A-213ENST00000534374 A0A1B0GV90 55 aa10.5□□□□□ -0.73
YIF1A-213ENST00000534374 ATP5EP2Q5VTU8 51 aa10.5□□□□□ -0.73
YIF1A-213ENST00000534374 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
YIF1A-213ENST00000534374 KRTAP19-8Q3LI54 63 aa10.46□□□□□ -0.73
YIF1A-213ENST00000534374 MT1BP07438 61 aa10.45□□□□□ -0.74
YIF1A-213ENST00000534374 HIST1H4AP62805 103 aaKnown RBP10.45□□□□□ -0.74
YIF1A-213ENST00000534374 Q5VV11 94 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms