RNA–Protein interactions for RNA: ENST00000533641.5

CAPRIN1-214, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-214ENST00000533641 DNAH11Q96DT5 4516 aa0.63□□□□□ -2.31
CAPRIN1-214ENST00000533641 SACSQ9NZJ4 4579 aa0.62□□□□□ -2.31
CAPRIN1-214ENST00000533641 TNRC18O15417 2968 aaPredicted RBP0.62□□□□□ -2.31
CAPRIN1-214ENST00000533641 SPTA1P02549 2419 aa0.62□□□□□ -2.31
CAPRIN1-214ENST00000533641 UBR5O95071 2799 aaPredicted RBP0.62□□□□□ -2.31
CAPRIN1-214ENST00000533641 SETD2Q9BYW2 2564 aaPredicted RBP0.62□□□□□ -2.31
CAPRIN1-214ENST00000533641 CHD8Q9HCK8 2581 aa0.62□□□□□ -2.31
CAPRIN1-214ENST00000533641 MAST4O15021 2626 aa0.61□□□□□ -2.31
CAPRIN1-214ENST00000533641 DEFB104AQ8WTQ1 72 aa0.61□□□□□ -2.31
CAPRIN1-214ENST00000533641 U3KQA8 63 aa0.61□□□□□ -2.31
CAPRIN1-214ENST00000533641 NCOR1O75376 2440 aa0.61□□□□□ -2.31
CAPRIN1-214ENST00000533641 SPENQ96T58 3664 aaKnown RBP0.61□□□□□ -2.31
CAPRIN1-214ENST00000533641 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
CAPRIN1-214ENST00000533641 HUWE1Q7Z6Z7 4374 aaKnown RBP0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 APCP25054 2843 aa0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 M0QZ58 72 aa0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 PRM1P04553 51 aa0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 USP9XQ93008 2570 aaPredicted RBP0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 VPS13DQ5THJ4 4388 aa0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 PDZD2O15018 2839 aa0.6□□□□□ -2.31
CAPRIN1-214ENST00000533641 NOTCH1P46531 2555 aa0.59□□□□□ -2.31
CAPRIN1-214ENST00000533641 DNAH3Q8TD57 4116 aa0.59□□□□□ -2.31
CAPRIN1-214ENST00000533641 LRRK2Q5S007 2527 aa0.59□□□□□ -2.31
CAPRIN1-214ENST00000533641 CREBBPQ92793 2442 aa0.59□□□□□ -2.32
CAPRIN1-214ENST00000533641 CHD7Q9P2D1 2997 aa0.59□□□□□ -2.32
CAPRIN1-214ENST00000533641 SETXQ7Z333 2677 aaKnown RBP0.59□□□□□ -2.32
CAPRIN1-214ENST00000533641 UBR4Q5T4S7 5183 aa0.58□□□□□ -2.32
CAPRIN1-214ENST00000533641 PKHD1L1Q86WI1 4243 aa0.58□□□□□ -2.32
CAPRIN1-214ENST00000533641 ANKRD11Q6UB99 2663 aaPredicted RBP0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 NBPF19A0A087WUL8 3843 aa0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 WNK1Q9H4A3 2382 aa0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 COL6A5A8TX70 2615 aa0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 CCDC168Q8NDH2 2452 aa0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 ANKHD1Q8IWZ3 2542 aaKnown RBP0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 MACF1Q9UPN3 7388 aaKnown RBP0.57□□□□□ -2.32
CAPRIN1-214ENST00000533641 STAB1Q9NY15 2570 aa0.56□□□□□ -2.32
CAPRIN1-214ENST00000533641 NCOR2Q9Y618 2525 aa0.56□□□□□ -2.32
CAPRIN1-214ENST00000533641 TNP1P09430 55 aa0.56□□□□□ -2.32
CAPRIN1-214ENST00000533641 SRCAPQ6ZRS2 3230 aa0.56□□□□□ -2.32
CAPRIN1-214ENST00000533641 HECTD4Q9Y4D8 3996 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 EPG5Q9HCE0 2579 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 PKD1L1Q8TDX9 2849 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 H3BNG1 76 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 SPTBN4Q9H254 2564 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 GCN1Q92616 2671 aaKnown RBP0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 TENM2Q9NT68 2774 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 DOPEY1Q5JWR5 2465 aa0.55□□□□□ -2.32
CAPRIN1-214ENST00000533641 NBASA2RRP1 2371 aa0.54□□□□□ -2.32
CAPRIN1-214ENST00000533641 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
CAPRIN1-214ENST00000533641 K7EIM0 57 aa0.54□□□□□ -2.32
CAPRIN1-214ENST00000533641 ITPR3Q14573 2671 aa0.54□□□□□ -2.32
CAPRIN1-214ENST00000533641 DNAH7Q8WXX0 4024 aa0.54□□□□□ -2.32
CAPRIN1-214ENST00000533641 CUBNO60494 3623 aa0.54□□□□□ -2.32
CAPRIN1-214ENST00000533641 FLNBO75369 2602 aaKnown RBP0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 PKD1P98161 4303 aa0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 DYNC2H1Q8NCM8 4307 aaKnown RBP0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 PCLOQ9Y6V0 5065 aa0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 NF1P21359 2839 aa0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 ZFHX4Q86UP3 3567 aa0.53□□□□□ -2.32
CAPRIN1-214ENST00000533641 HIVEP3Q5T1R4 2406 aa0.53□□□□□ -2.33
CAPRIN1-214ENST00000533641 ZFYVE26Q68DK2 2539 aa0.53□□□□□ -2.33
CAPRIN1-214ENST00000533641 MYO18BQ8IUG5 2567 aa0.52□□□□□ -2.33
CAPRIN1-214ENST00000533641 FLNCQ14315 2725 aa0.52□□□□□ -2.33
CAPRIN1-214ENST00000533641 ANK3Q12955 4377 aaKnown RBP0.52□□□□□ -2.33
CAPRIN1-214ENST00000533641 TMEM167AQ8TBQ9 72 aa0.52□□□□□ -2.33
CAPRIN1-214ENST00000533641 USP9YO00507 2555 aaPredicted RBP0.52□□□□□ -2.33
CAPRIN1-214ENST00000533641 DNAH6Q9C0G6 4158 aa0.52□□□□□ -2.33
CAPRIN1-214ENST00000533641 DNAH2Q9P225 4427 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 ACANP16112 2415 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 FASNP49327 2511 aaKnown RBP0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 DEFB110Q30KQ9 67 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 CEP350Q5VT06 3117 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 CRYBG3Q68DQ2 2970 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 WDFY4Q6ZS81 3184 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 DMBT1Q9UGM3 2413 aaPredicted RBP0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 LPAP08519 4548 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 HSPG2P98160 4391 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 CEP295Q9C0D2 2601 aa0.51□□□□□ -2.33
CAPRIN1-214ENST00000533641 ACACBO00763 2458 aa0.5□□□□□ -2.33
CAPRIN1-214ENST00000533641 DNAH8Q96JB1 4490 aa0.5□□□□□ -2.33
CAPRIN1-214ENST00000533641 ZZEF1O43149 2961 aa0.5□□□□□ -2.33
CAPRIN1-214ENST00000533641 AKAP9Q99996 3911 aa0.5□□□□□ -2.33
CAPRIN1-214ENST00000533641 IGSF10Q6WRI0 2623 aa0.5□□□□□ -2.33
CAPRIN1-214ENST00000533641 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
CAPRIN1-214ENST00000533641 TACC2O95359 2948 aa0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 DSTQ03001 7570 aaKnown RBP0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 SPART-AS1P0CW21 52 aa0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 MUC2Q02817 5179 aa0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 PCNTO95613 3336 aa0.49□□□□□ -2.33
CAPRIN1-214ENST00000533641 DMXL1Q9Y485 3027 aa0.48□□□□□ -2.33
CAPRIN1-214ENST00000533641 ACACAQ13085 2346 aa0.48□□□□□ -2.33
CAPRIN1-214ENST00000533641 FLGP20930 4061 aaPredicted RBP0.48□□□□□ -2.33
CAPRIN1-214ENST00000533641 LRP1Q07954 4544 aaKnown RBP0.48□□□□□ -2.33
CAPRIN1-214ENST00000533641 SPRR2DP22532 72 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms