RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 IGKV4-1P06312 121 aa7.72□□□□□ -1.17
TRAPPC4-214ENST00000533632 DSCR10P59022 87 aa7.72□□□□□ -1.17
TRAPPC4-214ENST00000533632 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
TRAPPC4-214ENST00000533632 Q5XG85 94 aa7.69□□□□□ -1.18
TRAPPC4-214ENST00000533632 Q8N9L7 120 aa7.69□□□□□ -1.18
TRAPPC4-214ENST00000533632 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
TRAPPC4-214ENST00000533632 A8MWP4 228 aa7.68□□□□□ -1.18
TRAPPC4-214ENST00000533632 DEFB116Q30KQ4 102 aa7.67□□□□□ -1.18
TRAPPC4-214ENST00000533632 Q96NJ1 140 aa7.67□□□□□ -1.18
TRAPPC4-214ENST00000533632 K7EQZ3 153 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 NDUFB1O75438 58 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 SPINK1P00995 79 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 PRR15Q8IV56 129 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 V9GYY9 64 aa7.66□□□□□ -1.18
TRAPPC4-214ENST00000533632 UQCRQO14949 82 aa7.64□□□□□ -1.19
TRAPPC4-214ENST00000533632 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
TRAPPC4-214ENST00000533632 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
TRAPPC4-214ENST00000533632 SERP2Q8N6R1 65 aa7.61□□□□□ -1.19
TRAPPC4-214ENST00000533632 RETNLBQ9BQ08 111 aa7.6□□□□□ -1.19
TRAPPC4-214ENST00000533632 LRP2P98164 4655 aa7.59□□□□□ -1.19
TRAPPC4-214ENST00000533632 LPAP08519 4548 aa7.59□□□□□ -1.19
TRAPPC4-214ENST00000533632 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.2
TRAPPC4-214ENST00000533632 COX7CP15954 63 aa7.59□□□□□ -1.2
TRAPPC4-214ENST00000533632 A0A1B0GVX0 72 aa7.58□□□□□ -1.2
TRAPPC4-214ENST00000533632 TMEM258P61165 79 aa7.57□□□□□ -1.2
TRAPPC4-214ENST00000533632 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
TRAPPC4-214ENST00000533632 CASC2Q6XLA1 102 aa7.55□□□□□ -1.2
TRAPPC4-214ENST00000533632 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
TRAPPC4-214ENST00000533632 MMP24-AS1A0A0U1RRL7 71 aa7.53□□□□□ -1.2
TRAPPC4-214ENST00000533632 C8orf17Q9NRJ1 99 aa7.53□□□□□ -1.2
TRAPPC4-214ENST00000533632 IGHV6-1A0A0B4J1U7 121 aa7.52□□□□□ -1.21
TRAPPC4-214ENST00000533632 LCE2DQ5TA82 110 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC4-214ENST00000533632 WFDC13Q8IUB5 93 aa7.52□□□□□ -1.21
TRAPPC4-214ENST00000533632 hDV103S1A0JD37 113 aa7.51□□□□□ -1.21
TRAPPC4-214ENST00000533632 C8orf87E5RJ46 101 aa7.51□□□□□ -1.21
TRAPPC4-214ENST00000533632 C4orf26Q17RF5 130 aa7.51□□□□□ -1.21
TRAPPC4-214ENST00000533632 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
TRAPPC4-214ENST00000533632 PRR4Q16378 134 aa7.47□□□□□ -1.21
TRAPPC4-214ENST00000533632 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
TRAPPC4-214ENST00000533632 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC4-214ENST00000533632 MRPL34Q9BQ48 92 aaKnown RBP7.45□□□□□ -1.22
TRAPPC4-214ENST00000533632 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
TRAPPC4-214ENST00000533632 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
TRAPPC4-214ENST00000533632 LINC00313P59037 77 aa7.44□□□□□ -1.22
TRAPPC4-214ENST00000533632 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
TRAPPC4-214ENST00000533632 KLKP1Q107X0 134 aa7.42□□□□□ -1.22
TRAPPC4-214ENST00000533632 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
TRAPPC4-214ENST00000533632 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
TRAPPC4-214ENST00000533632 MP68P56378 58 aa7.38□□□□□ -1.23
TRAPPC4-214ENST00000533632 FAM236DA0A1B0GTK5 79 aa7.38□□□□□ -1.23
TRAPPC4-214ENST00000533632 H3BPC8 53 aa7.38□□□□□ -1.23
TRAPPC4-214ENST00000533632 NDUFC1O43677 76 aa7.38□□□□□ -1.23
TRAPPC4-214ENST00000533632 FAM236CP0DP71 79 aa7.38□□□□□ -1.23
TRAPPC4-214ENST00000533632 A0A0U1RQV1 116 aa7.37□□□□□ -1.23
TRAPPC4-214ENST00000533632 NDUFS5O43920 106 aa7.37□□□□□ -1.23
TRAPPC4-214ENST00000533632 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
TRAPPC4-214ENST00000533632 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC4-214ENST00000533632 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
TRAPPC4-214ENST00000533632 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
TRAPPC4-214ENST00000533632 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
TRAPPC4-214ENST00000533632 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
TRAPPC4-214ENST00000533632 H0Y9P7 68 aa7.33□□□□□ -1.24
TRAPPC4-214ENST00000533632 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
TRAPPC4-214ENST00000533632 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
TRAPPC4-214ENST00000533632 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
TRAPPC4-214ENST00000533632 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
TRAPPC4-214ENST00000533632 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
TRAPPC4-214ENST00000533632 CYSTM1Q9H1C7 97 aa7.31□□□□□ -1.24
TRAPPC4-214ENST00000533632 RNF213Q63HN8 5207 aa7.31□□□□□ -1.24
TRAPPC4-214ENST00000533632 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
TRAPPC4-214ENST00000533632 H7BZZ5 65 aa7.3□□□□□ -1.24
TRAPPC4-214ENST00000533632 XP32Q5T750 250 aa7.29□□□□□ -1.24
TRAPPC4-214ENST00000533632 LINC00208Q96KT6 92 aa7.29□□□□□ -1.24
TRAPPC4-214ENST00000533632 PMAIP1Q13794 54 aa7.28□□□□□ -1.24
TRAPPC4-214ENST00000533632 C1orf64Q8NEQ6 169 aa7.27□□□□□ -1.25
TRAPPC4-214ENST00000533632 MUC2Q02817 5179 aa7.24□□□□□ -1.25
TRAPPC4-214ENST00000533632 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
TRAPPC4-214ENST00000533632 Q5W150 140 aa7.23□□□□□ -1.25
TRAPPC4-214ENST00000533632 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
TRAPPC4-214ENST00000533632 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC4-214ENST00000533632 BRK1Q8WUW1 75 aa7.22□□□□□ -1.25
TRAPPC4-214ENST00000533632 A8MUU9 505 aa7.21□□□□□ -1.25
TRAPPC4-214ENST00000533632 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
TRAPPC4-214ENST00000533632 Q75L30 129 aa7.17□□□□□ -1.26
TRAPPC4-214ENST00000533632 SPANXA2-OT1Q8N9U9 137 aa7.16□□□□□ -1.26
TRAPPC4-214ENST00000533632 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.27
TRAPPC4-214ENST00000533632 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
TRAPPC4-214ENST00000533632 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
TRAPPC4-214ENST00000533632 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
TRAPPC4-214ENST00000533632 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
TRAPPC4-214ENST00000533632 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
TRAPPC4-214ENST00000533632 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
TRAPPC4-214ENST00000533632 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
TRAPPC4-214ENST00000533632 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
TRAPPC4-214ENST00000533632 HRES1P13985 223 aa7.01□□□□□ -1.29
TRAPPC4-214ENST00000533632 SPINK7P58062 85 aa6.97□□□□□ -1.29
TRAPPC4-214ENST00000533632 KTN1-AS1Q86SY8 53 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms