RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 A0A1B0GVX0 72 aa7.8□□□□□ -1.16
CPSF1-211ENST00000533492 J3KT08 172 aa7.79□□□□□ -1.16
CPSF1-211ENST00000533492 M0R143 59 aa7.77□□□□□ -1.17
CPSF1-211ENST00000533492 ATXN8Q156A1 80 aa7.76□□□□□ -1.17
CPSF1-211ENST00000533492 Q6ZQT0 140 aa7.76□□□□□ -1.17
CPSF1-211ENST00000533492 NDUFB1O75438 58 aa7.75□□□□□ -1.17
CPSF1-211ENST00000533492 HRES1P13985 223 aa7.75□□□□□ -1.17
CPSF1-211ENST00000533492 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
CPSF1-211ENST00000533492 JMJD7-PLA2G4BH0Y9G9 81 aa7.74□□□□□ -1.17
CPSF1-211ENST00000533492 NAA38Q9BRA0 125 aaKnown RBP7.74□□□□□ -1.17
CPSF1-211ENST00000533492 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
CPSF1-211ENST00000533492 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
CPSF1-211ENST00000533492 A0A1B0GW54 56 aa7.7□□□□□ -1.18
CPSF1-211ENST00000533492 MTURNQ8N3F0 131 aa7.7□□□□□ -1.18
CPSF1-211ENST00000533492 PDE6GP18545 87 aa7.69□□□□□ -1.18
CPSF1-211ENST00000533492 LOC110117498A0A087WWA1 95 aa7.68□□□□□ -1.18
CPSF1-211ENST00000533492 LYRM7Q5U5X0 104 aa7.68□□□□□ -1.18
CPSF1-211ENST00000533492 A8MWP4 228 aa7.67□□□□□ -1.18
CPSF1-211ENST00000533492 SPINK7P58062 85 aa7.67□□□□□ -1.18
CPSF1-211ENST00000533492 Q8N9P0 234 aaPredicted RBP7.66□□□□□ -1.18
CPSF1-211ENST00000533492 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
CPSF1-211ENST00000533492 C14orf132Q9NPU4 83 aa7.65□□□□□ -1.18
CPSF1-211ENST00000533492 IGKV3D-7A0A0C4DH55 119 aa7.63□□□□□ -1.19
CPSF1-211ENST00000533492 MT2AP02795 61 aa7.63□□□□□ -1.19
CPSF1-211ENST00000533492 SMIM6P0DI80 62 aa7.63□□□□□ -1.19
CPSF1-211ENST00000533492 NREPQ16612 68 aa7.62□□□□□ -1.19
CPSF1-211ENST00000533492 BATFQ16520 125 aa7.61□□□□□ -1.19
CPSF1-211ENST00000533492 Q6ZVQ6 151 aa7.6□□□□□ -1.19
CPSF1-211ENST00000533492 TSTD3H0UI37 97 aa7.59□□□□□ -1.19
CPSF1-211ENST00000533492 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
CPSF1-211ENST00000533492 PRR15Q8IV56 129 aa7.58□□□□□ -1.2
CPSF1-211ENST00000533492 MT1FP04733 61 aa7.57□□□□□ -1.2
CPSF1-211ENST00000533492 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
CPSF1-211ENST00000533492 USH2AO75445 5202 aa7.54□□□□□ -1.2
CPSF1-211ENST00000533492 LOC105371267A0A1B0GV96 52 aa7.54□□□□□ -1.2
CPSF1-211ENST00000533492 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
CPSF1-211ENST00000533492 MRPL34Q9BQ48 92 aaKnown RBP7.53□□□□□ -1.2
CPSF1-211ENST00000533492 MMP24-AS1A0A0U1RRL7 71 aa7.52□□□□□ -1.21
CPSF1-211ENST00000533492 C9orf118A6NHY6 69 aa7.52□□□□□ -1.21
CPSF1-211ENST00000533492 H3BT86 120 aa7.52□□□□□ -1.21
CPSF1-211ENST00000533492 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
CPSF1-211ENST00000533492 hDV103S1A0JD37 113 aa7.5□□□□□ -1.21
CPSF1-211ENST00000533492 NDUFS5O43920 106 aa7.5□□□□□ -1.21
CPSF1-211ENST00000533492 LCE2BO14633 110 aa7.49□□□□□ -1.21
CPSF1-211ENST00000533492 A0A1W2PPM0 123 aa7.48□□□□□ -1.21
CPSF1-211ENST00000533492 K7EQZ3 153 aa7.48□□□□□ -1.21
CPSF1-211ENST00000533492 BPY2O14599 106 aa7.47□□□□□ -1.21
CPSF1-211ENST00000533492 TAX1BP3O14907 124 aa7.47□□□□□ -1.21
CPSF1-211ENST00000533492 SSPOA2VEC9 5147 aa7.47□□□□□ -1.21
CPSF1-211ENST00000533492 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
CPSF1-211ENST00000533492 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
CPSF1-211ENST00000533492 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
CPSF1-211ENST00000533492 IGKV2D-30A0A075B6S6 120 aa7.4□□□□□ -1.22
CPSF1-211ENST00000533492 IGKV2-30P06310 120 aa7.4□□□□□ -1.22
CPSF1-211ENST00000533492 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
CPSF1-211ENST00000533492 SPCS1Q9Y6A9 102 aa7.39□□□□□ -1.23
CPSF1-211ENST00000533492 Q5W150 140 aa7.37□□□□□ -1.23
CPSF1-211ENST00000533492 CASC2Q6XLA1 102 aa7.37□□□□□ -1.23
CPSF1-211ENST00000533492 C7orf65Q6ZTY9 151 aa7.37□□□□□ -1.23
CPSF1-211ENST00000533492 Q8N9L7 120 aa7.36□□□□□ -1.23
CPSF1-211ENST00000533492 HCG22E2RYF7 251 aa7.35□□□□□ -1.23
CPSF1-211ENST00000533492 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
CPSF1-211ENST00000533492 FCGBPQ9Y6R7 5405 aaPredicted RBP7.34□□□□□ -1.23
CPSF1-211ENST00000533492 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
CPSF1-211ENST00000533492 CXCL6P80162 114 aa7.3□□□□□ -1.24
CPSF1-211ENST00000533492 UBL5Q9BZL1 73 aa7.3□□□□□ -1.24
CPSF1-211ENST00000533492 C4orf26Q17RF5 130 aa7.27□□□□□ -1.25
CPSF1-211ENST00000533492 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
CPSF1-211ENST00000533492 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
CPSF1-211ENST00000533492 PRO0461Q9UI25 63 aa7.24□□□□□ -1.25
CPSF1-211ENST00000533492 K7EP34 96 aa7.22□□□□□ -1.25
CPSF1-211ENST00000533492 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
CPSF1-211ENST00000533492 GTF2H5Q6ZYL4 71 aa7.15□□□□□ -1.26
CPSF1-211ENST00000533492 PCP4L1A6NKN8 68 aa7.14□□□□□ -1.27
CPSF1-211ENST00000533492 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
CPSF1-211ENST00000533492 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
CPSF1-211ENST00000533492 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
CPSF1-211ENST00000533492 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
CPSF1-211ENST00000533492 S4R3F8 94 aa7.13□□□□□ -1.27
CPSF1-211ENST00000533492 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
CPSF1-211ENST00000533492 F8W1H4 67 aa7.11□□□□□ -1.27
CPSF1-211ENST00000533492 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
CPSF1-211ENST00000533492 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
CPSF1-211ENST00000533492 LCA10Q71F78 164 aa7.06□□□□□ -1.28
CPSF1-211ENST00000533492 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
CPSF1-211ENST00000533492 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
CPSF1-211ENST00000533492 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
CPSF1-211ENST00000533492 Q5VV11 94 aa6.97□□□□□ -1.29
CPSF1-211ENST00000533492 TRAV22A0A0B4J277 110 aa6.96□□□□□ -1.3
CPSF1-211ENST00000533492 ACYP1P07311 99 aa6.95□□□□□ -1.3
CPSF1-211ENST00000533492 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
CPSF1-211ENST00000533492 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
CPSF1-211ENST00000533492 A6NN06 94 aa6.94□□□□□ -1.3
CPSF1-211ENST00000533492 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
CPSF1-211ENST00000533492 KLKP1Q107X0 134 aa6.93□□□□□ -1.3
CPSF1-211ENST00000533492 MT1BP07438 61 aa6.92□□□□□ -1.3
CPSF1-211ENST00000533492 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
CPSF1-211ENST00000533492 HIST1H4AP62805 103 aaKnown RBP6.91□□□□□ -1.3
CPSF1-211ENST00000533492 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
CPSF1-211ENST00000533492 ATP5EP2Q5VTU8 51 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms