RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
UBXN1-215ENST00000533476 DNAH5Q8TE73 4624 aa11.4□□□□□ -0.58
UBXN1-215ENST00000533476 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
UBXN1-215ENST00000533476 CDK2AP2O75956 126 aa11.38□□□□□ -0.59
UBXN1-215ENST00000533476 CD164Q04900 197 aa11.38□□□□□ -0.59
UBXN1-215ENST00000533476 RYR3Q15413 4870 aa11.37□□□□□ -0.59
UBXN1-215ENST00000533476 SSBP3-AS1Q7Z2R9 100 aa11.37□□□□□ -0.59
UBXN1-215ENST00000533476 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
UBXN1-215ENST00000533476 PRR4Q16378 134 aa11.34□□□□□ -0.59
UBXN1-215ENST00000533476 PKD1P98161 4303 aa11.32□□□□□ -0.6
UBXN1-215ENST00000533476 RYR2Q92736 4967 aa11.32□□□□□ -0.6
UBXN1-215ENST00000533476 V9GYY9 64 aa11.3□□□□□ -0.6
UBXN1-215ENST00000533476 FAT2Q9NYQ8 4349 aa11.28□□□□□ -0.6
UBXN1-215ENST00000533476 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.6
UBXN1-215ENST00000533476 BRK1Q8WUW1 75 aa11.27□□□□□ -0.61
UBXN1-215ENST00000533476 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
UBXN1-215ENST00000533476 A0A087X002 238 aa11.25□□□□□ -0.61
UBXN1-215ENST00000533476 KRTAP13-2Q52LG2 175 aa11.25□□□□□ -0.61
UBXN1-215ENST00000533476 SPINK6Q6UWN8 80 aa11.25□□□□□ -0.61
UBXN1-215ENST00000533476 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
UBXN1-215ENST00000533476 NDUFS5O43920 106 aa11.22□□□□□ -0.61
UBXN1-215ENST00000533476 C1orf195Q5TG92 126 aa11.2□□□□□ -0.62
UBXN1-215ENST00000533476 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
UBXN1-215ENST00000533476 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
UBXN1-215ENST00000533476 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
UBXN1-215ENST00000533476 LIMD2Q9BT23 127 aa11.14□□□□□ -0.63
UBXN1-215ENST00000533476 Q8N9P0 234 aaPredicted RBP11.13□□□□□ -0.63
UBXN1-215ENST00000533476 PSPHP1O15172 72 aa11.12□□□□□ -0.63
UBXN1-215ENST00000533476 COA5Q86WW8 74 aa11.12□□□□□ -0.63
UBXN1-215ENST00000533476 PCOTHQ58A44 107 aa11.11□□□□□ -0.63
UBXN1-215ENST00000533476 A8MUN3 132 aa11.09□□□□□ -0.63
UBXN1-215ENST00000533476 LOC101927531A0A1B0GV80 90 aa11.08□□□□□ -0.64
UBXN1-215ENST00000533476 KRTAP13-3Q3SY46 172 aa11.07□□□□□ -0.64
UBXN1-215ENST00000533476 Q5VV11 94 aa11.06□□□□□ -0.64
UBXN1-215ENST00000533476 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
UBXN1-215ENST00000533476 LINC00313P59037 77 aa11.05□□□□□ -0.64
UBXN1-215ENST00000533476 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
UBXN1-215ENST00000533476 Q5W150 140 aa11.03□□□□□ -0.64
UBXN1-215ENST00000533476 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
UBXN1-215ENST00000533476 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
UBXN1-215ENST00000533476 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
UBXN1-215ENST00000533476 EPPK1P58107 5090 aaKnown RBP10.99□□□□□ -0.65
UBXN1-215ENST00000533476 SPINK1P00995 79 aa10.97□□□□□ -0.65
UBXN1-215ENST00000533476 PRR15LQ9BU68 103 aa10.97□□□□□ -0.65
UBXN1-215ENST00000533476 A0A1B0GVY2 172 aa10.96□□□□□ -0.65
UBXN1-215ENST00000533476 HRES1P13985 223 aa10.96□□□□□ -0.66
UBXN1-215ENST00000533476 Q75L30 129 aa10.96□□□□□ -0.66
UBXN1-215ENST00000533476 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
UBXN1-215ENST00000533476 LINC01558Q9Y6Z2 57 aa10.95□□□□□ -0.66
UBXN1-215ENST00000533476 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
UBXN1-215ENST00000533476 CHKB-CPT1BH3BT56 60 aa10.92□□□□□ -0.66
UBXN1-215ENST00000533476 RPS29P62273 56 aaKnown RBP10.9□□□□□ -0.67
UBXN1-215ENST00000533476 PRR26Q8N8Z3 221 aa10.89□□□□□ -0.67
UBXN1-215ENST00000533476 LINC00304Q8N9R0 145 aa10.88□□□□□ -0.67
UBXN1-215ENST00000533476 SMR3BP02814 79 aaPredicted RBP10.87□□□□□ -0.67
UBXN1-215ENST00000533476 SPAG11AQ6PDA7 123 aa10.86□□□□□ -0.67
UBXN1-215ENST00000533476 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
UBXN1-215ENST00000533476 ACYP2P14621 99 aa10.84□□□□□ -0.67
UBXN1-215ENST00000533476 KRTAP10-4P60372 401 aaPredicted RBP10.83□□□□□ -0.68
UBXN1-215ENST00000533476 IGKV2-30P06310 120 aa10.82□□□□□ -0.68
UBXN1-215ENST00000533476 RETNLBQ9BQ08 111 aa10.82□□□□□ -0.68
UBXN1-215ENST00000533476 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
UBXN1-215ENST00000533476 A6NED7 52 aa10.78□□□□□ -0.68
UBXN1-215ENST00000533476 LCA10Q71F78 164 aa10.75□□□□□ -0.69
UBXN1-215ENST00000533476 A8MU10 97 aa10.74□□□□□ -0.69
UBXN1-215ENST00000533476 CDC42SE1Q9NRR8 79 aa10.74□□□□□ -0.69
UBXN1-215ENST00000533476 APOBP04114 4563 aaKnown RBP10.73□□□□□ -0.69
UBXN1-215ENST00000533476 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
UBXN1-215ENST00000533476 PMAIP1Q13794 54 aa10.72□□□□□ -0.69
UBXN1-215ENST00000533476 IGKV2D-30A0A075B6S6 120 aa10.66□□□□□ -0.7
UBXN1-215ENST00000533476 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
UBXN1-215ENST00000533476 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
UBXN1-215ENST00000533476 FAT1Q14517 4588 aa10.62□□□□□ -0.71
UBXN1-215ENST00000533476 SPINK7P58062 85 aa10.61□□□□□ -0.71
UBXN1-215ENST00000533476 HSPG2P98160 4391 aa10.6□□□□□ -0.71
UBXN1-215ENST00000533476 BIRC6Q9NR09 4857 aa10.59□□□□□ -0.71
UBXN1-215ENST00000533476 SPTSSBQ8NFR3 76 aa10.59□□□□□ -0.71
UBXN1-215ENST00000533476 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
UBXN1-215ENST00000533476 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
UBXN1-215ENST00000533476 A8MUU9 505 aa10.54□□□□□ -0.72
UBXN1-215ENST00000533476 A6NN06 94 aa10.54□□□□□ -0.72
UBXN1-215ENST00000533476 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
UBXN1-215ENST00000533476 RYR1P21817 5038 aa10.52□□□□□ -0.72
UBXN1-215ENST00000533476 KRTAP17-1Q9BYP8 105 aa10.5□□□□□ -0.73
UBXN1-215ENST00000533476 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
UBXN1-215ENST00000533476 A0A1B0GU69 56 aa10.48□□□□□ -0.73
UBXN1-215ENST00000533476 Q5VSD8 79 aa10.43□□□□□ -0.74
UBXN1-215ENST00000533476 Q8N1X5 172 aa10.41□□□□□ -0.74
UBXN1-215ENST00000533476 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
UBXN1-215ENST00000533476 KRTAP10-8P60410 259 aa10.41□□□□□ -0.74
UBXN1-215ENST00000533476 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
UBXN1-215ENST00000533476 SEC61GP60059 68 aa10.36□□□□□ -0.75
UBXN1-215ENST00000533476 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
UBXN1-215ENST00000533476 HERC2O95714 4834 aa10.35□□□□□ -0.75
UBXN1-215ENST00000533476 UQCR11O14957 56 aa10.33□□□□□ -0.76
UBXN1-215ENST00000533476 TNXBP22105 4242 aa10.3□□□□□ -0.76
UBXN1-215ENST00000533476 MIR22HGQ0VDD5 57 aa10.28□□□□□ -0.76
UBXN1-215ENST00000533476 ABCA13Q86UQ4 5058 aa10.25□□□□□ -0.77
UBXN1-215ENST00000533476 FAT3Q8TDW7 4589 aa10.25□□□□□ -0.77
UBXN1-215ENST00000533476 LRP1Q07954 4544 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms