RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 C8orf87E5RJ46 101 aa11.63□□□□□ -0.55
PTP4A2-215ENST00000533408 LINC00313P59037 77 aa11.62□□□□□ -0.55
PTP4A2-215ENST00000533408 IGHV6-1A0A0B4J1U7 121 aa11.6□□□□□ -0.55
PTP4A2-215ENST00000533408 PRR15Q8IV56 129 aa11.57□□□□□ -0.56
PTP4A2-215ENST00000533408 CXCL6P80162 114 aa11.56□□□□□ -0.56
PTP4A2-215ENST00000533408 DSCR10P59022 87 aa11.55□□□□□ -0.56
PTP4A2-215ENST00000533408 XP32Q5T750 250 aa11.55□□□□□ -0.56
PTP4A2-215ENST00000533408 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
PTP4A2-215ENST00000533408 K7ERU9 68 aa11.54□□□□□ -0.56
PTP4A2-215ENST00000533408 ATP5EP2Q5VTU8 51 aa11.53□□□□□ -0.56
PTP4A2-215ENST00000533408 SEC61BP60468 96 aaKnown RBP11.5□□□□□ -0.57
PTP4A2-215ENST00000533408 LINC00643Q86TS7 51 aa11.49□□□□□ -0.57
PTP4A2-215ENST00000533408 C8orf17Q9NRJ1 99 aa11.49□□□□□ -0.57
PTP4A2-215ENST00000533408 K7EQZ3 153 aa11.48□□□□□ -0.57
PTP4A2-215ENST00000533408 HMCN2Q8NDA2 5059 aa11.47□□□□□ -0.57
PTP4A2-215ENST00000533408 Q75L30 129 aa11.46□□□□□ -0.57
PTP4A2-215ENST00000533408 RPL37P61927 97 aaKnown RBP11.44□□□□□ -0.58
PTP4A2-215ENST00000533408 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
PTP4A2-215ENST00000533408 NOTCH2NLQ7Z3S9 236 aa11.42□□□□□ -0.58
PTP4A2-215ENST00000533408 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
PTP4A2-215ENST00000533408 hDV103S1A0JD37 113 aa11.4□□□□□ -0.58
PTP4A2-215ENST00000533408 A8MUU9 505 aa11.4□□□□□ -0.58
PTP4A2-215ENST00000533408 KRTAP16-1A8MUX0 517 aa11.39□□□□□ -0.59
PTP4A2-215ENST00000533408 Q8N9L7 120 aa11.39□□□□□ -0.59
PTP4A2-215ENST00000533408 TMEM254Q8TBM7 123 aa11.39□□□□□ -0.59
PTP4A2-215ENST00000533408 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
PTP4A2-215ENST00000533408 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
PTP4A2-215ENST00000533408 MRPL34Q9BQ48 92 aaKnown RBP11.35□□□□□ -0.59
PTP4A2-215ENST00000533408 HCG22E2RYF7 251 aa11.34□□□□□ -0.59
PTP4A2-215ENST00000533408 Q8N9P0 234 aaPredicted RBP11.33□□□□□ -0.6
PTP4A2-215ENST00000533408 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
PTP4A2-215ENST00000533408 LPAP08519 4548 aa11.32□□□□□ -0.6
PTP4A2-215ENST00000533408 WFDC13Q8IUB5 93 aa11.3□□□□□ -0.6
PTP4A2-215ENST00000533408 PCOTHQ58A44 107 aa11.29□□□□□ -0.6
PTP4A2-215ENST00000533408 NDUFS5O43920 106 aa11.27□□□□□ -0.61
PTP4A2-215ENST00000533408 LRP2P98164 4655 aa11.26□□□□□ -0.61
PTP4A2-215ENST00000533408 IMUPQ9GZP8 106 aa11.21□□□□□ -0.61
PTP4A2-215ENST00000533408 ZCCHC13Q8WW36 166 aaKnown RBP11.2□□□□□ -0.62
PTP4A2-215ENST00000533408 TP53AIP1Q9HCN2 124 aa11.19□□□□□ -0.62
PTP4A2-215ENST00000533408 A0A087WVE0 104 aa11.1□□□□□ -0.63
PTP4A2-215ENST00000533408 A0A0U1RQV1 116 aa11.07□□□□□ -0.64
PTP4A2-215ENST00000533408 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
PTP4A2-215ENST00000533408 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
PTP4A2-215ENST00000533408 UBR4Q5T4S7 5183 aa11.04□□□□□ -0.64
PTP4A2-215ENST00000533408 UQCRQO14949 82 aa11.01□□□□□ -0.65
PTP4A2-215ENST00000533408 KRTAP4-1Q9BYQ7 146 aa11□□□□□ -0.65
PTP4A2-215ENST00000533408 MUC17Q685J3 4493 aa10.98□□□□□ -0.65
PTP4A2-215ENST00000533408 SPINK7P58062 85 aa10.98□□□□□ -0.65
PTP4A2-215ENST00000533408 Q5W150 140 aa10.97□□□□□ -0.65
PTP4A2-215ENST00000533408 TRAV22A0A0B4J277 110 aa10.94□□□□□ -0.66
PTP4A2-215ENST00000533408 ATOX1O00244 68 aa10.93□□□□□ -0.66
PTP4A2-215ENST00000533408 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
PTP4A2-215ENST00000533408 SMIM20Q8N5G0 67 aa10.93□□□□□ -0.66
PTP4A2-215ENST00000533408 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
PTP4A2-215ENST00000533408 FAM236AA0A1B0GUQ0 79 aa10.89□□□□□ -0.67
PTP4A2-215ENST00000533408 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
PTP4A2-215ENST00000533408 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
PTP4A2-215ENST00000533408 OCR1Q9BZK8 76 aa10.89□□□□□ -0.67
PTP4A2-215ENST00000533408 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
PTP4A2-215ENST00000533408 C5orf47Q569G3 176 aa10.87□□□□□ -0.67
PTP4A2-215ENST00000533408 MP68P56378 58 aa10.86□□□□□ -0.67
PTP4A2-215ENST00000533408 LOC101927531A0A1B0GV80 90 aa10.85□□□□□ -0.67
PTP4A2-215ENST00000533408 H0Y9P7 68 aa10.84□□□□□ -0.67
PTP4A2-215ENST00000533408 COX6B2Q6YFQ2 88 aa10.83□□□□□ -0.68
PTP4A2-215ENST00000533408 RNF213Q63HN8 5207 aa10.81□□□□□ -0.68
PTP4A2-215ENST00000533408 HRES1P13985 223 aa10.81□□□□□ -0.68
PTP4A2-215ENST00000533408 H3BPC8 53 aa10.8□□□□□ -0.68
PTP4A2-215ENST00000533408 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
PTP4A2-215ENST00000533408 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
PTP4A2-215ENST00000533408 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
PTP4A2-215ENST00000533408 MUC2Q02817 5179 aa10.75□□□□□ -0.69
PTP4A2-215ENST00000533408 C1orf64Q8NEQ6 169 aa10.75□□□□□ -0.69
PTP4A2-215ENST00000533408 MPLKIPQ8TAP9 179 aa10.75□□□□□ -0.69
PTP4A2-215ENST00000533408 CYP4F30PQ9H0H9 118 aa10.75□□□□□ -0.69
PTP4A2-215ENST00000533408 LINC00208Q96KT6 92 aa10.73□□□□□ -0.69
PTP4A2-215ENST00000533408 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
PTP4A2-215ENST00000533408 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
PTP4A2-215ENST00000533408 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
PTP4A2-215ENST00000533408 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
PTP4A2-215ENST00000533408 H1FX-AS1Q4G0G2 97 aa10.56□□□□□ -0.72
PTP4A2-215ENST00000533408 M0R2T5 61 aa10.5□□□□□ -0.73
PTP4A2-215ENST00000533408 MT1HP80294 61 aa10.5□□□□□ -0.73
PTP4A2-215ENST00000533408 COX7CP15954 63 aa10.49□□□□□ -0.73
PTP4A2-215ENST00000533408 KLKP1Q107X0 134 aa10.48□□□□□ -0.73
PTP4A2-215ENST00000533408 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
PTP4A2-215ENST00000533408 A8MUN3 132 aa10.47□□□□□ -0.73
PTP4A2-215ENST00000533408 C20orf197Q8N268 126 aa10.47□□□□□ -0.73
PTP4A2-215ENST00000533408 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
PTP4A2-215ENST00000533408 SNURFQ9Y675 71 aa10.41□□□□□ -0.74
PTP4A2-215ENST00000533408 FAT4Q6V0I7 4981 aa10.4□□□□□ -0.74
PTP4A2-215ENST00000533408 KRTAP3-1Q9BYR8 98 aa10.38□□□□□ -0.75
PTP4A2-215ENST00000533408 NDUFC1O43677 76 aa10.35□□□□□ -0.75
PTP4A2-215ENST00000533408 S4R3F8 94 aa10.33□□□□□ -0.76
PTP4A2-215ENST00000533408 SPANXA2-OT1Q8N9U9 137 aa10.3□□□□□ -0.76
PTP4A2-215ENST00000533408 DMAC1Q96GE9 116 aa10.29□□□□□ -0.76
PTP4A2-215ENST00000533408 ACYP2P14621 99 aa10.25□□□□□ -0.77
PTP4A2-215ENST00000533408 CSAG1Q6PB30 78 aa10.24□□□□□ -0.77
PTP4A2-215ENST00000533408 KRTAP10-6P60371 365 aaPredicted RBP10.22□□□□□ -0.77
PTP4A2-215ENST00000533408 LCA10Q71F78 164 aa10.2□□□□□ -0.78
PTP4A2-215ENST00000533408 FLGP20930 4061 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms