RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 A0A087X002 238 aa9.04□□□□□ -0.96
CACNA1E-208ENST00000533229 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
CACNA1E-208ENST00000533229 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
CACNA1E-208ENST00000533229 H3BPC8 53 aa9.02□□□□□ -0.97
CACNA1E-208ENST00000533229 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
CACNA1E-208ENST00000533229 Q1T7F1 81 aa9.01□□□□□ -0.97
CACNA1E-208ENST00000533229 Q6ZSA8 131 aa9□□□□□ -0.97
CACNA1E-208ENST00000533229 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
CACNA1E-208ENST00000533229 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
CACNA1E-208ENST00000533229 PSPHP1O15172 72 aa8.97□□□□□ -0.97
CACNA1E-208ENST00000533229 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
CACNA1E-208ENST00000533229 SSBP3-AS1Q7Z2R9 100 aa8.95□□□□□ -0.98
CACNA1E-208ENST00000533229 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
CACNA1E-208ENST00000533229 NDUFS5O43920 106 aa8.95□□□□□ -0.98
CACNA1E-208ENST00000533229 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
CACNA1E-208ENST00000533229 CD164Q04900 197 aa8.93□□□□□ -0.98
CACNA1E-208ENST00000533229 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
CACNA1E-208ENST00000533229 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
CACNA1E-208ENST00000533229 PCOTHQ58A44 107 aa8.9□□□□□ -0.99
CACNA1E-208ENST00000533229 A8MUN3 132 aa8.89□□□□□ -0.99
CACNA1E-208ENST00000533229 PKHD1P08F94 4074 aa8.87□□□□□ -0.99
CACNA1E-208ENST00000533229 KRTAP1-4P0C5Y4 121 aa8.87□□□□□ -0.99
CACNA1E-208ENST00000533229 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
CACNA1E-208ENST00000533229 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
CACNA1E-208ENST00000533229 Q5W150 140 aa8.86□□□□□ -0.99
CACNA1E-208ENST00000533229 SACSQ9NZJ4 4579 aa8.85□□□□□ -0.99
CACNA1E-208ENST00000533229 Q5VV11 94 aa8.83□□□□□ -1
CACNA1E-208ENST00000533229 A8MU10 97 aa8.83□□□□□ -1
CACNA1E-208ENST00000533229 Q8N9P0 234 aaPredicted RBP8.83□□□□□ -1
CACNA1E-208ENST00000533229 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
CACNA1E-208ENST00000533229 COA5Q86WW8 74 aa8.8□□□□□ -1
CACNA1E-208ENST00000533229 V9GYY9 64 aa8.8□□□□□ -1
CACNA1E-208ENST00000533229 C8orf87E5RJ46 101 aa8.78□□□□□ -1
CACNA1E-208ENST00000533229 LINC00313P59037 77 aa8.77□□□□□ -1.01
CACNA1E-208ENST00000533229 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
CACNA1E-208ENST00000533229 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
CACNA1E-208ENST00000533229 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
CACNA1E-208ENST00000533229 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
CACNA1E-208ENST00000533229 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
CACNA1E-208ENST00000533229 DYNC1H1Q14204 4646 aaKnown RBP8.72□□□□□ -1.01
CACNA1E-208ENST00000533229 KRTAP16-1A8MUX0 517 aa8.7□□□□□ -1.02
CACNA1E-208ENST00000533229 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
CACNA1E-208ENST00000533229 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
CACNA1E-208ENST00000533229 HRES1P13985 223 aa8.69□□□□□ -1.02
CACNA1E-208ENST00000533229 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
CACNA1E-208ENST00000533229 FAT1Q14517 4588 aa8.66□□□□□ -1.02
CACNA1E-208ENST00000533229 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.02
CACNA1E-208ENST00000533229 Q75L30 129 aa8.65□□□□□ -1.02
CACNA1E-208ENST00000533229 FAM229AH3BQW9 127 aa8.65□□□□□ -1.03
CACNA1E-208ENST00000533229 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.03
CACNA1E-208ENST00000533229 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.03
CACNA1E-208ENST00000533229 SPINK1P00995 79 aa8.63□□□□□ -1.03
CACNA1E-208ENST00000533229 LCA10Q71F78 164 aa8.63□□□□□ -1.03
CACNA1E-208ENST00000533229 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
CACNA1E-208ENST00000533229 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
CACNA1E-208ENST00000533229 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
CACNA1E-208ENST00000533229 A6NED7 52 aa8.59□□□□□ -1.03
CACNA1E-208ENST00000533229 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
CACNA1E-208ENST00000533229 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
CACNA1E-208ENST00000533229 RYR2Q92736 4967 aa8.57□□□□□ -1.04
CACNA1E-208ENST00000533229 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
CACNA1E-208ENST00000533229 KMT2CQ8NEZ4 4911 aaKnown RBP8.56□□□□□ -1.04
CACNA1E-208ENST00000533229 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
CACNA1E-208ENST00000533229 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
CACNA1E-208ENST00000533229 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
CACNA1E-208ENST00000533229 ACYP2P14621 99 aa8.52□□□□□ -1.05
CACNA1E-208ENST00000533229 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.05
CACNA1E-208ENST00000533229 SPINK7P58062 85 aa8.51□□□□□ -1.05
CACNA1E-208ENST00000533229 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
CACNA1E-208ENST00000533229 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
CACNA1E-208ENST00000533229 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
CACNA1E-208ENST00000533229 SEC61GP60059 68 aa8.5□□□□□ -1.05
CACNA1E-208ENST00000533229 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
CACNA1E-208ENST00000533229 RYR3Q15413 4870 aa8.46□□□□□ -1.06
CACNA1E-208ENST00000533229 A6NN06 94 aa8.45□□□□□ -1.06
CACNA1E-208ENST00000533229 KTN1-AS1Q86SY8 53 aa8.41□□□□□ -1.06
CACNA1E-208ENST00000533229 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
CACNA1E-208ENST00000533229 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
CACNA1E-208ENST00000533229 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
CACNA1E-208ENST00000533229 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
CACNA1E-208ENST00000533229 A8MUU9 505 aa8.33□□□□□ -1.08
CACNA1E-208ENST00000533229 Q8N1X5 172 aa8.31□□□□□ -1.08
CACNA1E-208ENST00000533229 HSPG2P98160 4391 aa8.29□□□□□ -1.08
CACNA1E-208ENST00000533229 TNXBP22105 4242 aa8.28□□□□□ -1.08
CACNA1E-208ENST00000533229 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
CACNA1E-208ENST00000533229 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
CACNA1E-208ENST00000533229 A0A1B0GU69 56 aa8.26□□□□□ -1.09
CACNA1E-208ENST00000533229 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
CACNA1E-208ENST00000533229 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
CACNA1E-208ENST00000533229 Q5VSD8 79 aa8.2□□□□□ -1.1
CACNA1E-208ENST00000533229 KRTAP17-1Q9BYP8 105 aa8.2□□□□□ -1.1
CACNA1E-208ENST00000533229 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
CACNA1E-208ENST00000533229 RYR1P21817 5038 aa8.17□□□□□ -1.1
CACNA1E-208ENST00000533229 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
CACNA1E-208ENST00000533229 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
CACNA1E-208ENST00000533229 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
CACNA1E-208ENST00000533229 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
CACNA1E-208ENST00000533229 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
CACNA1E-208ENST00000533229 MIR22HGQ0VDD5 57 aa8.11□□□□□ -1.11
CACNA1E-208ENST00000533229 KIAA1109Q2LD37 5005 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms