RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
SSBP3-214ENST00000533209 J3KT08 172 aa6.38□□□□□ -1.39
SSBP3-214ENST00000533209 LINC00313P59037 77 aa6.38□□□□□ -1.39
SSBP3-214ENST00000533209 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
SSBP3-214ENST00000533209 IGHV6-1A0A0B4J1U7 121 aa6.37□□□□□ -1.39
SSBP3-214ENST00000533209 A0A0U1RQV1 116 aa6.36□□□□□ -1.39
SSBP3-214ENST00000533209 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
SSBP3-214ENST00000533209 A8MUU9 505 aa6.36□□□□□ -1.39
SSBP3-214ENST00000533209 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
SSBP3-214ENST00000533209 NREPQ16612 68 aa6.35□□□□□ -1.39
SSBP3-214ENST00000533209 F8W1H4 67 aa6.34□□□□□ -1.39
SSBP3-214ENST00000533209 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
SSBP3-214ENST00000533209 ATP11AUNQ6ZP68 121 aa6.33□□□□□ -1.4
SSBP3-214ENST00000533209 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
SSBP3-214ENST00000533209 A8MWP4 228 aa6.32□□□□□ -1.4
SSBP3-214ENST00000533209 NDUFB1O75438 58 aa6.32□□□□□ -1.4
SSBP3-214ENST00000533209 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
SSBP3-214ENST00000533209 Q6ZVQ6 151 aa6.29□□□□□ -1.4
SSBP3-214ENST00000533209 PRR15Q8IV56 129 aa6.28□□□□□ -1.4
SSBP3-214ENST00000533209 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
SSBP3-214ENST00000533209 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
SSBP3-214ENST00000533209 LINC00846Q9NV44 126 aa6.27□□□□□ -1.41
SSBP3-214ENST00000533209 BPY2O14599 106 aa6.26□□□□□ -1.41
SSBP3-214ENST00000533209 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
SSBP3-214ENST00000533209 K7EQZ3 153 aa6.25□□□□□ -1.41
SSBP3-214ENST00000533209 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
SSBP3-214ENST00000533209 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
SSBP3-214ENST00000533209 A0A1B0GV90 55 aa6.23□□□□□ -1.41
SSBP3-214ENST00000533209 Q8N9P0 234 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-214ENST00000533209 UBL5Q9BZL1 73 aa6.23□□□□□ -1.41
SSBP3-214ENST00000533209 Q8N9L7 120 aa6.2□□□□□ -1.42
SSBP3-214ENST00000533209 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
SSBP3-214ENST00000533209 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
SSBP3-214ENST00000533209 hDV103S1A0JD37 113 aa6.18□□□□□ -1.42
SSBP3-214ENST00000533209 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
SSBP3-214ENST00000533209 MT1HP80294 61 aa6.14□□□□□ -1.43
SSBP3-214ENST00000533209 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
SSBP3-214ENST00000533209 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
SSBP3-214ENST00000533209 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
SSBP3-214ENST00000533209 ACYP1P07311 99 aa6.13□□□□□ -1.43
SSBP3-214ENST00000533209 CXCL6P80162 114 aa6.12□□□□□ -1.43
SSBP3-214ENST00000533209 CASC2Q6XLA1 102 aa6.12□□□□□ -1.43
SSBP3-214ENST00000533209 HRES1P13985 223 aa6.11□□□□□ -1.43
SSBP3-214ENST00000533209 NDUFS5O43920 106 aa6.1□□□□□ -1.43
SSBP3-214ENST00000533209 HCG22E2RYF7 251 aa6.09□□□□□ -1.43
SSBP3-214ENST00000533209 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
SSBP3-214ENST00000533209 SPINK7P58062 85 aa6.08□□□□□ -1.44
SSBP3-214ENST00000533209 Q5W150 140 aa6.06□□□□□ -1.44
SSBP3-214ENST00000533209 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
SSBP3-214ENST00000533209 ATP5EP2Q5VTU8 51 aa6.03□□□□□ -1.44
SSBP3-214ENST00000533209 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
SSBP3-214ENST00000533209 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
SSBP3-214ENST00000533209 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
SSBP3-214ENST00000533209 M0R2T5 61 aa6□□□□□ -1.45
SSBP3-214ENST00000533209 LINC00643Q86TS7 51 aa6□□□□□ -1.45
SSBP3-214ENST00000533209 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-214ENST00000533209 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-214ENST00000533209 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
SSBP3-214ENST00000533209 J3QR89 54 aa5.97□□□□□ -1.45
SSBP3-214ENST00000533209 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
SSBP3-214ENST00000533209 HIST1H4AP62805 103 aaKnown RBP5.97□□□□□ -1.45
SSBP3-214ENST00000533209 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.46
SSBP3-214ENST00000533209 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
SSBP3-214ENST00000533209 A0A087WVE0 104 aa5.93□□□□□ -1.46
SSBP3-214ENST00000533209 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
SSBP3-214ENST00000533209 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
SSBP3-214ENST00000533209 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
SSBP3-214ENST00000533209 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
SSBP3-214ENST00000533209 UQCRQO14949 82 aa5.85□□□□□ -1.47
SSBP3-214ENST00000533209 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
SSBP3-214ENST00000533209 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
SSBP3-214ENST00000533209 K7ERU9 68 aa5.84□□□□□ -1.47
SSBP3-214ENST00000533209 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
SSBP3-214ENST00000533209 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
SSBP3-214ENST00000533209 H0Y9P7 68 aa5.8□□□□□ -1.48
SSBP3-214ENST00000533209 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
SSBP3-214ENST00000533209 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
SSBP3-214ENST00000533209 ATOX1O00244 68 aa5.78□□□□□ -1.48
SSBP3-214ENST00000533209 MT2AP02795 61 aa5.78□□□□□ -1.48
SSBP3-214ENST00000533209 MT-ATP8P03928 68 aa5.78□□□□□ -1.48
SSBP3-214ENST00000533209 C1orf64Q8NEQ6 169 aa5.77□□□□□ -1.49
SSBP3-214ENST00000533209 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
SSBP3-214ENST00000533209 MT1FP04733 61 aa5.74□□□□□ -1.49
SSBP3-214ENST00000533209 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
SSBP3-214ENST00000533209 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
SSBP3-214ENST00000533209 MP68P56378 58 aa5.71□□□□□ -1.5
SSBP3-214ENST00000533209 C5orf47Q569G3 176 aa5.71□□□□□ -1.5
SSBP3-214ENST00000533209 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
SSBP3-214ENST00000533209 S4R3F8 94 aa5.69□□□□□ -1.5
SSBP3-214ENST00000533209 KLKP1Q107X0 134 aa5.68□□□□□ -1.5
SSBP3-214ENST00000533209 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
SSBP3-214ENST00000533209 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
SSBP3-214ENST00000533209 H3BPC8 53 aa5.67□□□□□ -1.5
SSBP3-214ENST00000533209 LCA10Q71F78 164 aa5.67□□□□□ -1.5
SSBP3-214ENST00000533209 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
SSBP3-214ENST00000533209 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
SSBP3-214ENST00000533209 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
SSBP3-214ENST00000533209 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
SSBP3-214ENST00000533209 CSAG1Q6PB30 78 aa5.62□□□□□ -1.51
SSBP3-214ENST00000533209 SMIM20Q8N5G0 67 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms