RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 A0A1B0GVX0 72 aa15.52■□□□□ 0.08
SSSCA1-207ENST00000533115 TRBV20-1A0A075B6N2 111 aa15.5■□□□□ 0.07
SSSCA1-207ENST00000533115 C8orf87E5RJ46 101 aa15.5■□□□□ 0.07
SSSCA1-207ENST00000533115 LYRM7Q5U5X0 104 aa15.5■□□□□ 0.07
SSSCA1-207ENST00000533115 J3KT08 172 aa15.49■□□□□ 0.07
SSSCA1-207ENST00000533115 LOC110117498A0A087WWA1 95 aa15.48■□□□□ 0.07
SSSCA1-207ENST00000533115 BATFQ16520 125 aa15.48■□□□□ 0.07
SSSCA1-207ENST00000533115 A0A1B0GW54 56 aa15.43■□□□□ 0.06
SSSCA1-207ENST00000533115 PDE6GP18545 87 aa15.43■□□□□ 0.06
SSSCA1-207ENST00000533115 LOC105371267A0A1B0GV96 52 aa15.41■□□□□ 0.06
SSSCA1-207ENST00000533115 C14orf132Q9NPU4 83 aa15.4■□□□□ 0.06
SSSCA1-207ENST00000533115 NDUFB1O75438 58 aa15.36■□□□□ 0.05
SSSCA1-207ENST00000533115 C9orf118A6NHY6 69 aa15.33■□□□□ 0.04
SSSCA1-207ENST00000533115 A8MWP4 228 aa15.29■□□□□ 0.04
SSSCA1-207ENST00000533115 TAX1BP3O14907 124 aa15.28■□□□□ 0.04
SSSCA1-207ENST00000533115 HRES1P13985 223 aa15.28■□□□□ 0.04
SSSCA1-207ENST00000533115 FSIP2Q5CZC0 6907 aa15.28■□□□□ 0.04
SSSCA1-207ENST00000533115 CRCT1Q9UGL9 99 aa15.27■□□□□ 0.04
SSSCA1-207ENST00000533115 A0A1W2PPM0 123 aa15.26■□□□□ 0.03
SSSCA1-207ENST00000533115 MPLKIPQ8TAP9 179 aa15.26■□□□□ 0.03
SSSCA1-207ENST00000533115 ZCCHC13Q8WW36 166 aaKnown RBP15.26■□□□□ 0.03
SSSCA1-207ENST00000533115 FAM236DA0A1B0GTK5 79 aa15.25■□□□□ 0.03
SSSCA1-207ENST00000533115 FAM236CP0DP71 79 aa15.25■□□□□ 0.03
SSSCA1-207ENST00000533115 C8orf17Q9NRJ1 99 aa15.25■□□□□ 0.03
SSSCA1-207ENST00000533115 IGKV3D-7A0A0C4DH55 119 aa15.24■□□□□ 0.03
SSSCA1-207ENST00000533115 H3BT86 120 aa15.24■□□□□ 0.03
SSSCA1-207ENST00000533115 RBM12B-AS1Q9P1G2 102 aa15.24■□□□□ 0.03
SSSCA1-207ENST00000533115 NREPQ16612 68 aa15.23■□□□□ 0.03
SSSCA1-207ENST00000533115 Q8N9P0 234 aaPredicted RBP15.23■□□□□ 0.03
SSSCA1-207ENST00000533115 MTURNQ8N3F0 131 aa15.18■□□□□ 0.02
SSSCA1-207ENST00000533115 PRR15Q8IV56 129 aa15.15■□□□□ 0.02
SSSCA1-207ENST00000533115 Q6ZVQ6 151 aa15.12■□□□□ 0.01
SSSCA1-207ENST00000533115 SPINK7P58062 85 aa15.11■□□□□ 0.01
SSSCA1-207ENST00000533115 KRTAP9-8Q9BYQ0 159 aa15.1■□□□□ 0.01
SSSCA1-207ENST00000533115 SPCS1Q9Y6A9 102 aa15.04■□□□□ -0
SSSCA1-207ENST00000533115 MMP24-AS1A0A0U1RRL7 71 aa15.03■□□□□ -0
SSSCA1-207ENST00000533115 TMEM254Q8TBM7 123 aa15.01□□□□□ -0.01
SSSCA1-207ENST00000533115 K7EQZ3 153 aa14.99□□□□□ -0.01
SSSCA1-207ENST00000533115 MRPL34Q9BQ48 92 aaKnown RBP14.99□□□□□ -0.01
SSSCA1-207ENST00000533115 hDV103S1A0JD37 113 aa14.94□□□□□ -0.02
SSSCA1-207ENST00000533115 BPY2O14599 106 aa14.94□□□□□ -0.02
SSSCA1-207ENST00000533115 SMCPP49901 116 aaPredicted RBP14.93□□□□□ -0.02
SSSCA1-207ENST00000533115 COL5A1-AS1Q5SY13 56 aa14.93□□□□□ -0.02
SSSCA1-207ENST00000533115 WFDC13Q8IUB5 93 aa14.89□□□□□ -0.03
SSSCA1-207ENST00000533115 MT2AP02795 61 aa14.88□□□□□ -0.03
SSSCA1-207ENST00000533115 NDUFS5O43920 106 aa14.86□□□□□ -0.03
SSSCA1-207ENST00000533115 PRO0461Q9UI25 63 aa14.82□□□□□ -0.04
SSSCA1-207ENST00000533115 K7EP34 96 aa14.8□□□□□ -0.04
SSSCA1-207ENST00000533115 Q8N9L7 120 aa14.78□□□□□ -0.04
SSSCA1-207ENST00000533115 MT1FP04733 61 aa14.77□□□□□ -0.05
SSSCA1-207ENST00000533115 USH2AO75445 5202 aa14.73□□□□□ -0.05
SSSCA1-207ENST00000533115 CASC2Q6XLA1 102 aa14.72□□□□□ -0.05
SSSCA1-207ENST00000533115 KRTAP10-10P60014 251 aa14.71□□□□□ -0.05
SSSCA1-207ENST00000533115 LINC00846Q9NV44 126 aa14.71□□□□□ -0.05
SSSCA1-207ENST00000533115 UBL5Q9BZL1 73 aa14.69□□□□□ -0.06
SSSCA1-207ENST00000533115 Q5W150 140 aa14.68□□□□□ -0.06
SSSCA1-207ENST00000533115 IGKV2D-30A0A075B6S6 120 aa14.64□□□□□ -0.07
SSSCA1-207ENST00000533115 HCG22E2RYF7 251 aa14.64□□□□□ -0.07
SSSCA1-207ENST00000533115 IGKV2-30P06310 120 aa14.64□□□□□ -0.07
SSSCA1-207ENST00000533115 KRTAP9-3Q9BYQ3 159 aa14.62□□□□□ -0.07
SSSCA1-207ENST00000533115 C7orf65Q6ZTY9 151 aa14.61□□□□□ -0.07
SSSCA1-207ENST00000533115 GTF2H5Q6ZYL4 71 aa14.61□□□□□ -0.07
SSSCA1-207ENST00000533115 SSPOA2VEC9 5147 aa14.59□□□□□ -0.07
SSSCA1-207ENST00000533115 H1FX-AS1Q4G0G2 97 aa14.57□□□□□ -0.08
SSSCA1-207ENST00000533115 PCP4L1A6NKN8 68 aa14.55□□□□□ -0.08
SSSCA1-207ENST00000533115 CXCL6P80162 114 aa14.55□□□□□ -0.08
SSSCA1-207ENST00000533115 LCE2BO14633 110 aa14.54□□□□□ -0.08
SSSCA1-207ENST00000533115 F8W1H4 67 aa14.53□□□□□ -0.08
SSSCA1-207ENST00000533115 ETDBQ3ZM63 59 aa14.46□□□□□ -0.09
SSSCA1-207ENST00000533115 C4orf26Q17RF5 130 aa14.38□□□□□ -0.11
SSSCA1-207ENST00000533115 TP53AIP1Q9HCN2 124 aa14.29□□□□□ -0.12
SSSCA1-207ENST00000533115 KRTAP19-1Q8IUB9 90 aa14.28□□□□□ -0.12
SSSCA1-207ENST00000533115 FCGBPQ9Y6R7 5405 aaPredicted RBP14.24□□□□□ -0.13
SSSCA1-207ENST00000533115 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.21□□□□□ -0.13
SSSCA1-207ENST00000533115 KRTAP3-1Q9BYR8 98 aa14.18□□□□□ -0.14
SSSCA1-207ENST00000533115 ACYP1P07311 99 aa14.15□□□□□ -0.14
SSSCA1-207ENST00000533115 C1orf64Q8NEQ6 169 aa14.13□□□□□ -0.15
SSSCA1-207ENST00000533115 C5orf47Q569G3 176 aa14.08□□□□□ -0.16
SSSCA1-207ENST00000533115 FAM240AA0A1B0GVK7 77 aa14.07□□□□□ -0.16
SSSCA1-207ENST00000533115 S4R3F8 94 aa14.07□□□□□ -0.16
SSSCA1-207ENST00000533115 KRTAP19-6Q3LI70 58 aa14.03□□□□□ -0.16
SSSCA1-207ENST00000533115 ATP5EP2Q5VTU8 51 aa14.02□□□□□ -0.17
SSSCA1-207ENST00000533115 KRTAP9-7A8MTY7 169 aa14.01□□□□□ -0.17
SSSCA1-207ENST00000533115 CYP4F30PQ9H0H9 118 aa13.99□□□□□ -0.17
SSSCA1-207ENST00000533115 TRAV22A0A0B4J277 110 aa13.97□□□□□ -0.17
SSSCA1-207ENST00000533115 LCA10Q71F78 164 aa13.97□□□□□ -0.17
SSSCA1-207ENST00000533115 CSAG1Q6PB30 78 aa13.96□□□□□ -0.17
SSSCA1-207ENST00000533115 HIST1H4AP62805 103 aaKnown RBP13.94□□□□□ -0.18
SSSCA1-207ENST00000533115 LOC101927531A0A1B0GV80 90 aa13.91□□□□□ -0.18
SSSCA1-207ENST00000533115 FAM236AA0A1B0GUQ0 79 aa13.89□□□□□ -0.19
SSSCA1-207ENST00000533115 FAM236BA0A1B0GV22 79 aa13.89□□□□□ -0.19
SSSCA1-207ENST00000533115 UQCRQO14949 82 aa13.83□□□□□ -0.2
SSSCA1-207ENST00000533115 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
SSSCA1-207ENST00000533115 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
SSSCA1-207ENST00000533115 H0Y9P7 68 aa13.77□□□□□ -0.21
SSSCA1-207ENST00000533115 A0A087WVE0 104 aa13.76□□□□□ -0.21
SSSCA1-207ENST00000533115 ATOX1O00244 68 aa13.76□□□□□ -0.21
SSSCA1-207ENST00000533115 A0A1B0GV90 55 aa13.74□□□□□ -0.21
SSSCA1-207ENST00000533115 MACF1Q9UPN3 7388 aaKnown RBP13.73□□□□□ -0.21
SSSCA1-207ENST00000533115 SPRR2GQ9BYE4 73 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms