RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ASH1LQ9NR48 2969 aaKnown RBP3.95□□□□□ -1.78
TGFBR3-210ENST00000533089 VPS13AQ96RL7 3174 aa3.95□□□□□ -1.78
TGFBR3-210ENST00000533089 P0C880 135 aa3.95□□□□□ -1.78
TGFBR3-210ENST00000533089 DMXL1Q9Y485 3027 aa3.95□□□□□ -1.78
TGFBR3-210ENST00000533089 NBEAQ8NFP9 2946 aa3.94□□□□□ -1.78
TGFBR3-210ENST00000533089 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
TGFBR3-210ENST00000533089 NIPBLQ6KC79 2804 aaeCLIP3.93□□□□□ -1.78
TGFBR3-210ENST00000533089 H0YAA0 97 aa3.92□□□□□ -1.78
TGFBR3-210ENST00000533089 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
TGFBR3-210ENST00000533089 TACC2O95359 2948 aa3.91□□□□□ -1.78
TGFBR3-210ENST00000533089 VCANP13611 3396 aa3.9□□□□□ -1.79
TGFBR3-210ENST00000533089 LAMA1P25391 3075 aa3.89□□□□□ -1.79
TGFBR3-210ENST00000533089 REV3LO60673 3130 aa3.89□□□□□ -1.79
TGFBR3-210ENST00000533089 STAB2Q8WWQ8 2551 aa3.87□□□□□ -1.79
TGFBR3-210ENST00000533089 HRNRQ86YZ3 2850 aaPredicted RBP3.87□□□□□ -1.79
TGFBR3-210ENST00000533089 ZZEF1O43149 2961 aa3.86□□□□□ -1.79
TGFBR3-210ENST00000533089 BOD1L1Q8NFC6 3051 aa3.86□□□□□ -1.79
TGFBR3-210ENST00000533089 NBEAL2Q6ZNJ1 2754 aa3.86□□□□□ -1.79
TGFBR3-210ENST00000533089 FREM2Q5SZK8 3169 aa3.85□□□□□ -1.79
TGFBR3-210ENST00000533089 ZANQ9Y493 2812 aa3.85□□□□□ -1.79
TGFBR3-210ENST00000533089 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
TGFBR3-210ENST00000533089 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
TGFBR3-210ENST00000533089 ADGRG4Q8IZF6 3080 aa3.84□□□□□ -1.79
TGFBR3-210ENST00000533089 LRBAP50851 2863 aa3.84□□□□□ -1.8
TGFBR3-210ENST00000533089 CELSR3Q9NYQ7 3312 aa3.83□□□□□ -1.8
TGFBR3-210ENST00000533089 USP34Q70CQ2 3546 aa3.83□□□□□ -1.8
TGFBR3-210ENST00000533089 PDZD2O15018 2839 aa3.82□□□□□ -1.8
TGFBR3-210ENST00000533089 MXRA5Q9NR99 2828 aa3.82□□□□□ -1.8
TGFBR3-210ENST00000533089 FBN2P35556 2912 aa3.81□□□□□ -1.8
TGFBR3-210ENST00000533089 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
TGFBR3-210ENST00000533089 CELSR2Q9HCU4 2923 aa3.79□□□□□ -1.8
TGFBR3-210ENST00000533089 DNAH14Q0VDD8 3507 aa3.79□□□□□ -1.8
TGFBR3-210ENST00000533089 KRTAP13-2Q52LG2 175 aa3.78□□□□□ -1.8
TGFBR3-210ENST00000533089 OTOGQ6ZRI0 2925 aa3.77□□□□□ -1.81
TGFBR3-210ENST00000533089 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
TGFBR3-210ENST00000533089 TNP1P09430 55 aa3.74□□□□□ -1.81
TGFBR3-210ENST00000533089 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
TGFBR3-210ENST00000533089 MYO15AQ9UKN7 3530 aa3.73□□□□□ -1.81
TGFBR3-210ENST00000533089 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
TGFBR3-210ENST00000533089 NF1P21359 2839 aa3.71□□□□□ -1.81
TGFBR3-210ENST00000533089 DCHS2Q6V1P9 2916 aa3.71□□□□□ -1.82
TGFBR3-210ENST00000533089 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
TGFBR3-210ENST00000533089 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
TGFBR3-210ENST00000533089 CRYBG3Q68DQ2 2970 aa3.68□□□□□ -1.82
TGFBR3-210ENST00000533089 TENM3Q9P273 2699 aa3.67□□□□□ -1.82
TGFBR3-210ENST00000533089 CFAP47Q6ZTR5 3102 aa3.65□□□□□ -1.82
TGFBR3-210ENST00000533089 LOC400499M0QZD8 3231 aa3.65□□□□□ -1.83
TGFBR3-210ENST00000533089 TENM1Q9UKZ4 2725 aa3.64□□□□□ -1.83
TGFBR3-210ENST00000533089 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
TGFBR3-210ENST00000533089 XP32Q5T750 250 aa3.63□□□□□ -1.83
TGFBR3-210ENST00000533089 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
TGFBR3-210ENST00000533089 SPEGQ15772 3267 aa3.62□□□□□ -1.83
TGFBR3-210ENST00000533089 TENM2Q9NT68 2774 aa3.61□□□□□ -1.83
TGFBR3-210ENST00000533089 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
TGFBR3-210ENST00000533089 DMDP11532 3685 aa3.61□□□□□ -1.83
TGFBR3-210ENST00000533089 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
TGFBR3-210ENST00000533089 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
TGFBR3-210ENST00000533089 RELNP78509 3460 aa3.59□□□□□ -1.84
TGFBR3-210ENST00000533089 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
TGFBR3-210ENST00000533089 DCHS1Q96JQ0 3298 aa3.58□□□□□ -1.84
TGFBR3-210ENST00000533089 INE1O15225 51 aa3.58□□□□□ -1.84
TGFBR3-210ENST00000533089 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
TGFBR3-210ENST00000533089 LAMA5O15230 3695 aa3.57□□□□□ -1.84
TGFBR3-210ENST00000533089 MUC3AQ02505 3323 aa3.56□□□□□ -1.84
TGFBR3-210ENST00000533089 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
TGFBR3-210ENST00000533089 VWFP04275 2813 aa3.54□□□□□ -1.84
TGFBR3-210ENST00000533089 KRTAP13-3Q3SY46 172 aa3.51□□□□□ -1.85
TGFBR3-210ENST00000533089 NBPF19A0A087WUL8 3843 aa3.51□□□□□ -1.85
TGFBR3-210ENST00000533089 ASPMQ8IZT6 3477 aa3.49□□□□□ -1.85
TGFBR3-210ENST00000533089 SMG1Q96Q15 3661 aaKnown RBP3.47□□□□□ -1.85
TGFBR3-210ENST00000533089 ZFHX4Q86UP3 3567 aa3.46□□□□□ -1.86
TGFBR3-210ENST00000533089 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
TGFBR3-210ENST00000533089 WDFY3Q8IZQ1 3526 aa3.45□□□□□ -1.86
TGFBR3-210ENST00000533089 CSMD1Q96PZ7 3565 aa3.44□□□□□ -1.86
TGFBR3-210ENST00000533089 CELSR1Q9NYQ6 3014 aa3.44□□□□□ -1.86
TGFBR3-210ENST00000533089 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
TGFBR3-210ENST00000533089 TGP01266 2768 aa3.43□□□□□ -1.86
TGFBR3-210ENST00000533089 PKD1L1Q8TDX9 2849 aa3.43□□□□□ -1.86
TGFBR3-210ENST00000533089 KRTAP13-4Q3LI77 160 aa3.43□□□□□ -1.86
TGFBR3-210ENST00000533089 ZFHX3Q15911 3703 aa3.43□□□□□ -1.86
TGFBR3-210ENST00000533089 ALMS1Q8TCU4 4167 aa3.37□□□□□ -1.87
TGFBR3-210ENST00000533089 SPENQ96T58 3664 aaKnown RBP3.37□□□□□ -1.87
TGFBR3-210ENST00000533089 MEGF8Q7Z7M0 2845 aa3.36□□□□□ -1.87
TGFBR3-210ENST00000533089 BSNQ9UPA5 3926 aa3.36□□□□□ -1.87
TGFBR3-210ENST00000533089 DNHD1Q96M86 4753 aa3.34□□□□□ -1.87
TGFBR3-210ENST00000533089 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
TGFBR3-210ENST00000533089 CSMD2Q7Z408 3487 aa3.31□□□□□ -1.88
TGFBR3-210ENST00000533089 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
TGFBR3-210ENST00000533089 KRTAP3-1Q9BYR8 98 aa3.3□□□□□ -1.88
TGFBR3-210ENST00000533089 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
TGFBR3-210ENST00000533089 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
TGFBR3-210ENST00000533089 TRRAPQ9Y4A5 3859 aa3.28□□□□□ -1.88
TGFBR3-210ENST00000533089 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
TGFBR3-210ENST00000533089 AKAP9Q99996 3911 aa3.27□□□□□ -1.89
TGFBR3-210ENST00000533089 DNAH9Q9NYC9 4486 aa3.26□□□□□ -1.89
TGFBR3-210ENST00000533089 DNAH11Q96DT5 4516 aa3.23□□□□□ -1.89
TGFBR3-210ENST00000533089 SVEP1Q4LDE5 3571 aa3.22□□□□□ -1.89
TGFBR3-210ENST00000533089 PLECQ15149 4684 aaKnown RBP3.22□□□□□ -1.89
TGFBR3-210ENST00000533089 SRRM2Q9UQ35 2752 aaKnown RBP3.19□□□□□ -1.9
TGFBR3-210ENST00000533089 DNAH5Q8TE73 4624 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms