RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FP248Q71RG6 208 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC4-211ENST00000533012 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
TRAPPC4-211ENST00000533012 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
TRAPPC4-211ENST00000533012 A0A1W2PNM2 257 aa6.33□□□□□ -1.4
TRAPPC4-211ENST00000533012 BPY2O14599 106 aa6.33□□□□□ -1.4
TRAPPC4-211ENST00000533012 UQCRQO14949 82 aa6.33□□□□□ -1.4
TRAPPC4-211ENST00000533012 UBR4Q5T4S7 5183 aa6.33□□□□□ -1.4
TRAPPC4-211ENST00000533012 SS18L2Q9UHA2 77 aa6.32□□□□□ -1.4
TRAPPC4-211ENST00000533012 A0A087WSZ3 146 aa6.31□□□□□ -1.4
TRAPPC4-211ENST00000533012 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
TRAPPC4-211ENST00000533012 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
TRAPPC4-211ENST00000533012 SERP2Q8N6R1 65 aa6.3□□□□□ -1.4
TRAPPC4-211ENST00000533012 LPAP08519 4548 aa6.3□□□□□ -1.4
TRAPPC4-211ENST00000533012 COX7CP15954 63 aa6.29□□□□□ -1.4
TRAPPC4-211ENST00000533012 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
TRAPPC4-211ENST00000533012 A0A087WVE0 104 aa6.27□□□□□ -1.41
TRAPPC4-211ENST00000533012 LRP2P98164 4655 aa6.27□□□□□ -1.41
TRAPPC4-211ENST00000533012 KRTAP13-3Q3SY46 172 aa6.25□□□□□ -1.41
TRAPPC4-211ENST00000533012 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
TRAPPC4-211ENST00000533012 J3KT08 172 aa6.24□□□□□ -1.41
TRAPPC4-211ENST00000533012 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
TRAPPC4-211ENST00000533012 IGKV4-1P06312 121 aa6.22□□□□□ -1.41
TRAPPC4-211ENST00000533012 Q96NJ1 140 aa6.21□□□□□ -1.42
TRAPPC4-211ENST00000533012 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
TRAPPC4-211ENST00000533012 LINC00472Q9H8W2 130 aa6.2□□□□□ -1.42
TRAPPC4-211ENST00000533012 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC4-211ENST00000533012 NDUFB1O75438 58 aa6.18□□□□□ -1.42
TRAPPC4-211ENST00000533012 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
TRAPPC4-211ENST00000533012 HCG22E2RYF7 251 aa6.15□□□□□ -1.42
TRAPPC4-211ENST00000533012 NDUFC1O43677 76 aa6.15□□□□□ -1.42
TRAPPC4-211ENST00000533012 XP32Q5T750 250 aa6.15□□□□□ -1.42
TRAPPC4-211ENST00000533012 A8MWP4 228 aa6.14□□□□□ -1.43
TRAPPC4-211ENST00000533012 DSCR10P59022 87 aa6.14□□□□□ -1.43
TRAPPC4-211ENST00000533012 TMEM258P61165 79 aa6.14□□□□□ -1.43
TRAPPC4-211ENST00000533012 K7EQZ3 153 aa6.13□□□□□ -1.43
TRAPPC4-211ENST00000533012 Q8N9L7 120 aa6.13□□□□□ -1.43
TRAPPC4-211ENST00000533012 LINC00313P59037 77 aa6.11□□□□□ -1.43
TRAPPC4-211ENST00000533012 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
TRAPPC4-211ENST00000533012 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
TRAPPC4-211ENST00000533012 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
TRAPPC4-211ENST00000533012 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
TRAPPC4-211ENST00000533012 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
TRAPPC4-211ENST00000533012 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
TRAPPC4-211ENST00000533012 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
TRAPPC4-211ENST00000533012 A0A1B0GVX0 72 aa6.08□□□□□ -1.44
TRAPPC4-211ENST00000533012 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC4-211ENST00000533012 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
TRAPPC4-211ENST00000533012 CASC2Q6XLA1 102 aa6.08□□□□□ -1.44
TRAPPC4-211ENST00000533012 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
TRAPPC4-211ENST00000533012 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
TRAPPC4-211ENST00000533012 TMEM254Q8TBM7 123 aa6.07□□□□□ -1.44
TRAPPC4-211ENST00000533012 RPL37P61927 97 aaKnown RBP6.06□□□□□ -1.44
TRAPPC4-211ENST00000533012 H3BPC8 53 aa6.05□□□□□ -1.44
TRAPPC4-211ENST00000533012 MP68P56378 58 aa6.05□□□□□ -1.44
TRAPPC4-211ENST00000533012 Q75L30 129 aa6.05□□□□□ -1.44
TRAPPC4-211ENST00000533012 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
TRAPPC4-211ENST00000533012 TP53AIP1Q9HCN2 124 aa6.04□□□□□ -1.44
TRAPPC4-211ENST00000533012 PCOTHQ58A44 107 aa6.03□□□□□ -1.44
TRAPPC4-211ENST00000533012 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
TRAPPC4-211ENST00000533012 WFDC13Q8IUB5 93 aa6.03□□□□□ -1.44
TRAPPC4-211ENST00000533012 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
TRAPPC4-211ENST00000533012 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
TRAPPC4-211ENST00000533012 A8MUU9 505 aa6.02□□□□□ -1.45
TRAPPC4-211ENST00000533012 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
TRAPPC4-211ENST00000533012 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
TRAPPC4-211ENST00000533012 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
TRAPPC4-211ENST00000533012 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
TRAPPC4-211ENST00000533012 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
TRAPPC4-211ENST00000533012 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
TRAPPC4-211ENST00000533012 MUC2Q02817 5179 aa6□□□□□ -1.45
TRAPPC4-211ENST00000533012 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
TRAPPC4-211ENST00000533012 H7BZZ5 65 aa5.99□□□□□ -1.45
TRAPPC4-211ENST00000533012 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
TRAPPC4-211ENST00000533012 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TRAPPC4-211ENST00000533012 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
TRAPPC4-211ENST00000533012 TRAV22A0A0B4J277 110 aa5.95□□□□□ -1.46
TRAPPC4-211ENST00000533012 H0Y9P7 68 aa5.94□□□□□ -1.46
TRAPPC4-211ENST00000533012 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC4-211ENST00000533012 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
TRAPPC4-211ENST00000533012 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
TRAPPC4-211ENST00000533012 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
TRAPPC4-211ENST00000533012 NDUFS5O43920 106 aa5.92□□□□□ -1.46
TRAPPC4-211ENST00000533012 ZCCHC13Q8WW36 166 aaKnown RBP5.91□□□□□ -1.46
TRAPPC4-211ENST00000533012 LINC00208Q96KT6 92 aa5.9□□□□□ -1.46
TRAPPC4-211ENST00000533012 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
TRAPPC4-211ENST00000533012 C1orf64Q8NEQ6 169 aa5.88□□□□□ -1.47
TRAPPC4-211ENST00000533012 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC4-211ENST00000533012 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
TRAPPC4-211ENST00000533012 CYP4F30PQ9H0H9 118 aa5.84□□□□□ -1.47
TRAPPC4-211ENST00000533012 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
TRAPPC4-211ENST00000533012 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
TRAPPC4-211ENST00000533012 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
TRAPPC4-211ENST00000533012 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
TRAPPC4-211ENST00000533012 SPINK7P58062 85 aa5.8□□□□□ -1.48
TRAPPC4-211ENST00000533012 Q5W150 140 aa5.78□□□□□ -1.48
TRAPPC4-211ENST00000533012 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
TRAPPC4-211ENST00000533012 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
TRAPPC4-211ENST00000533012 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
TRAPPC4-211ENST00000533012 HRES1P13985 223 aa5.73□□□□□ -1.49
TRAPPC4-211ENST00000533012 V9GYY9 64 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms