RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PCOTHQ58A44 107 aa10.73□□□□□ -0.69
UBXN1-213ENST00000532904 PRR15LQ9BU68 103 aa10.73□□□□□ -0.69
UBXN1-213ENST00000532904 IGHV6-1A0A0B4J1U7 121 aa10.72□□□□□ -0.69
UBXN1-213ENST00000532904 CHKB-CPT1BH3BT56 60 aa10.71□□□□□ -0.69
UBXN1-213ENST00000532904 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
UBXN1-213ENST00000532904 LOC101927531A0A1B0GV80 90 aa10.69□□□□□ -0.7
UBXN1-213ENST00000532904 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
UBXN1-213ENST00000532904 MRPL34Q9BQ48 92 aaKnown RBP10.69□□□□□ -0.7
UBXN1-213ENST00000532904 NDUFS5O43920 106 aa10.68□□□□□ -0.7
UBXN1-213ENST00000532904 Q75L30 129 aa10.68□□□□□ -0.7
UBXN1-213ENST00000532904 A8MU10 97 aa10.67□□□□□ -0.7
UBXN1-213ENST00000532904 PMAIP1Q13794 54 aa10.67□□□□□ -0.7
UBXN1-213ENST00000532904 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
UBXN1-213ENST00000532904 KRTAP10-2P60368 255 aa10.67□□□□□ -0.7
UBXN1-213ENST00000532904 ZNF861PO60384 105 aa10.65□□□□□ -0.7
UBXN1-213ENST00000532904 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
UBXN1-213ENST00000532904 A0A087X002 238 aa10.62□□□□□ -0.71
UBXN1-213ENST00000532904 NOTCH2NLQ7Z3S9 236 aa10.62□□□□□ -0.71
UBXN1-213ENST00000532904 Q6ZSA8 131 aa10.61□□□□□ -0.71
UBXN1-213ENST00000532904 LINC01558Q9Y6Z2 57 aa10.6□□□□□ -0.71
UBXN1-213ENST00000532904 DNAH11Q96DT5 4516 aa10.59□□□□□ -0.71
UBXN1-213ENST00000532904 DNAH8Q96JB1 4490 aa10.59□□□□□ -0.71
UBXN1-213ENST00000532904 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
UBXN1-213ENST00000532904 HRES1P13985 223 aa10.58□□□□□ -0.72
UBXN1-213ENST00000532904 CIRBP-AS1Q8TBR5 109 aa10.58□□□□□ -0.72
UBXN1-213ENST00000532904 LCA10Q71F78 164 aa10.57□□□□□ -0.72
UBXN1-213ENST00000532904 DNAH5Q8TE73 4624 aa10.56□□□□□ -0.72
UBXN1-213ENST00000532904 A6NED7 52 aa10.56□□□□□ -0.72
UBXN1-213ENST00000532904 SPAG11AQ6PDA7 123 aa10.55□□□□□ -0.72
UBXN1-213ENST00000532904 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
UBXN1-213ENST00000532904 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
UBXN1-213ENST00000532904 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
UBXN1-213ENST00000532904 FAT2Q9NYQ8 4349 aa10.52□□□□□ -0.73
UBXN1-213ENST00000532904 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.73
UBXN1-213ENST00000532904 PKD1P98161 4303 aa10.52□□□□□ -0.73
UBXN1-213ENST00000532904 SEC61GP60059 68 aa10.51□□□□□ -0.73
UBXN1-213ENST00000532904 Q5W150 140 aa10.51□□□□□ -0.73
UBXN1-213ENST00000532904 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
UBXN1-213ENST00000532904 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
UBXN1-213ENST00000532904 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
UBXN1-213ENST00000532904 C8orf87E5RJ46 101 aa10.45□□□□□ -0.74
UBXN1-213ENST00000532904 SSBP3-AS1Q7Z2R9 100 aa10.43□□□□□ -0.74
UBXN1-213ENST00000532904 KTN1-AS1Q86SY8 53 aa10.4□□□□□ -0.75
UBXN1-213ENST00000532904 SACSQ9NZJ4 4579 aa10.39□□□□□ -0.75
UBXN1-213ENST00000532904 A6NN06 94 aa10.39□□□□□ -0.75
UBXN1-213ENST00000532904 SPINK7P58062 85 aa10.39□□□□□ -0.75
UBXN1-213ENST00000532904 PRR26Q8N8Z3 221 aa10.38□□□□□ -0.75
UBXN1-213ENST00000532904 ACYP2P14621 99 aa10.38□□□□□ -0.75
UBXN1-213ENST00000532904 LINC00313P59037 77 aa10.34□□□□□ -0.75
UBXN1-213ENST00000532904 DMAC1Q96GE9 116 aa10.34□□□□□ -0.75
UBXN1-213ENST00000532904 FAM229AH3BQW9 127 aa10.32□□□□□ -0.76
UBXN1-213ENST00000532904 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
UBXN1-213ENST00000532904 LRP1BQ9NZR2 4599 aa10.3□□□□□ -0.76
UBXN1-213ENST00000532904 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
UBXN1-213ENST00000532904 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
UBXN1-213ENST00000532904 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
UBXN1-213ENST00000532904 RETNLBQ9BQ08 111 aa10.23□□□□□ -0.77
UBXN1-213ENST00000532904 KRTAP16-1A8MUX0 517 aa10.22□□□□□ -0.77
UBXN1-213ENST00000532904 VPS13BQ7Z7G8 4022 aa10.21□□□□□ -0.77
UBXN1-213ENST00000532904 C7orf65Q6ZTY9 151 aa10.21□□□□□ -0.78
UBXN1-213ENST00000532904 PKHD1P08F94 4074 aa10.2□□□□□ -0.78
UBXN1-213ENST00000532904 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
UBXN1-213ENST00000532904 RYR2Q92736 4967 aa10.15□□□□□ -0.78
UBXN1-213ENST00000532904 A0A1B0GU69 56 aa10.14□□□□□ -0.79
UBXN1-213ENST00000532904 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
UBXN1-213ENST00000532904 DYNC1H1Q14204 4646 aaKnown RBP10.14□□□□□ -0.79
UBXN1-213ENST00000532904 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
UBXN1-213ENST00000532904 IGKV2D-30A0A075B6S6 120 aa10.07□□□□□ -0.8
UBXN1-213ENST00000532904 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
UBXN1-213ENST00000532904 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
UBXN1-213ENST00000532904 KRTAP10-4P60372 401 aaPredicted RBP10.06□□□□□ -0.8
UBXN1-213ENST00000532904 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
UBXN1-213ENST00000532904 SPINK1P00995 79 aa10.05□□□□□ -0.8
UBXN1-213ENST00000532904 APOBP04114 4563 aaKnown RBP10.03□□□□□ -0.8
UBXN1-213ENST00000532904 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
UBXN1-213ENST00000532904 KMT2CQ8NEZ4 4911 aaKnown RBP10.02□□□□□ -0.81
UBXN1-213ENST00000532904 UQCR11O14957 56 aa9.99□□□□□ -0.81
UBXN1-213ENST00000532904 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
UBXN1-213ENST00000532904 LINC00304Q8N9R0 145 aa9.97□□□□□ -0.81
UBXN1-213ENST00000532904 FAT1Q14517 4588 aa9.88□□□□□ -0.83
UBXN1-213ENST00000532904 PRAC1Q96KF2 57 aa9.87□□□□□ -0.83
UBXN1-213ENST00000532904 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
UBXN1-213ENST00000532904 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
UBXN1-213ENST00000532904 Q8N1X5 172 aa9.84□□□□□ -0.83
UBXN1-213ENST00000532904 Q5VSD8 79 aa9.76□□□□□ -0.85
UBXN1-213ENST00000532904 RYR3Q15413 4870 aa9.76□□□□□ -0.85
UBXN1-213ENST00000532904 A8MUU9 505 aa9.72□□□□□ -0.85
UBXN1-213ENST00000532904 HSPG2P98160 4391 aa9.71□□□□□ -0.85
UBXN1-213ENST00000532904 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.85
UBXN1-213ENST00000532904 KRTAP10-8P60410 259 aa9.69□□□□□ -0.86
UBXN1-213ENST00000532904 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
UBXN1-213ENST00000532904 RYR1P21817 5038 aa9.66□□□□□ -0.86
UBXN1-213ENST00000532904 KRTAP3-1Q9BYR8 98 aa9.65□□□□□ -0.87
UBXN1-213ENST00000532904 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.87
UBXN1-213ENST00000532904 LINC01554Q52M75 96 aa9.64□□□□□ -0.87
UBXN1-213ENST00000532904 H0YAA0 97 aa9.62□□□□□ -0.87
UBXN1-213ENST00000532904 CSAG1Q6PB30 78 aa9.59□□□□□ -0.87
UBXN1-213ENST00000532904 TNXBP22105 4242 aa9.58□□□□□ -0.88
UBXN1-213ENST00000532904 KRTAP17-1Q9BYP8 105 aa9.58□□□□□ -0.88
UBXN1-213ENST00000532904 A0A1B0GU33 70 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms