RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 CELSR1Q9NYQ6 3014 aa4.61□□□□□ -1.67
CTNND1-230ENST00000532245 TENM1Q9UKZ4 2725 aa4.61□□□□□ -1.67
CTNND1-230ENST00000532245 CSAG1Q6PB30 78 aa4.61□□□□□ -1.67
CTNND1-230ENST00000532245 S4R3F8 94 aa4.61□□□□□ -1.67
CTNND1-230ENST00000532245 KLKP1Q107X0 134 aa4.61□□□□□ -1.67
CTNND1-230ENST00000532245 Q5W150 140 aa4.6□□□□□ -1.67
CTNND1-230ENST00000532245 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
CTNND1-230ENST00000532245 OCR1Q9BZK8 76 aa4.59□□□□□ -1.67
CTNND1-230ENST00000532245 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.67
CTNND1-230ENST00000532245 PKD1L1Q8TDX9 2849 aa4.59□□□□□ -1.67
CTNND1-230ENST00000532245 TENM3Q9P273 2699 aa4.59□□□□□ -1.68
CTNND1-230ENST00000532245 UQCR11O14957 56 aa4.58□□□□□ -1.68
CTNND1-230ENST00000532245 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
CTNND1-230ENST00000532245 A8MUN3 132 aa4.57□□□□□ -1.68
CTNND1-230ENST00000532245 H7BZZ5 65 aa4.56□□□□□ -1.68
CTNND1-230ENST00000532245 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
CTNND1-230ENST00000532245 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
CTNND1-230ENST00000532245 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
CTNND1-230ENST00000532245 RPS28P62857 69 aaKnown RBP4.55□□□□□ -1.68
CTNND1-230ENST00000532245 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
CTNND1-230ENST00000532245 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
CTNND1-230ENST00000532245 CSMD2Q7Z408 3487 aa4.53□□□□□ -1.68
CTNND1-230ENST00000532245 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
CTNND1-230ENST00000532245 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
CTNND1-230ENST00000532245 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
CTNND1-230ENST00000532245 FBN1P35555 2871 aaKnown RBP4.51□□□□□ -1.69
CTNND1-230ENST00000532245 SPENQ96T58 3664 aaKnown RBP4.51□□□□□ -1.69
CTNND1-230ENST00000532245 R4GN34 69 aa4.49□□□□□ -1.69
CTNND1-230ENST00000532245 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
CTNND1-230ENST00000532245 ANK3Q12955 4377 aaKnown RBP4.48□□□□□ -1.69
CTNND1-230ENST00000532245 ASB16-AS1Q495Z4 193 aa4.47□□□□□ -1.69
CTNND1-230ENST00000532245 VWFP04275 2813 aa4.47□□□□□ -1.69
CTNND1-230ENST00000532245 A0A1B0GU33 70 aa4.46□□□□□ -1.69
CTNND1-230ENST00000532245 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
CTNND1-230ENST00000532245 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
CTNND1-230ENST00000532245 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
CTNND1-230ENST00000532245 Q75L30 129 aa4.45□□□□□ -1.7
CTNND1-230ENST00000532245 SVEP1Q4LDE5 3571 aa4.44□□□□□ -1.7
CTNND1-230ENST00000532245 TGP01266 2768 aa4.43□□□□□ -1.7
CTNND1-230ENST00000532245 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
CTNND1-230ENST00000532245 BSNQ9UPA5 3926 aa4.43□□□□□ -1.7
CTNND1-230ENST00000532245 Q5XG85 94 aa4.43□□□□□ -1.7
CTNND1-230ENST00000532245 LCA10Q71F78 164 aa4.42□□□□□ -1.7
CTNND1-230ENST00000532245 KRTAP29-1A8MX34 341 aaPredicted RBP4.41□□□□□ -1.7
CTNND1-230ENST00000532245 M0QZ58 72 aa4.41□□□□□ -1.7
CTNND1-230ENST00000532245 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.7
CTNND1-230ENST00000532245 ADM2Q7Z4H4 148 aa4.4□□□□□ -1.71
CTNND1-230ENST00000532245 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
CTNND1-230ENST00000532245 Q1T7F1 81 aa4.37□□□□□ -1.71
CTNND1-230ENST00000532245 DMAC1Q96GE9 116 aa4.36□□□□□ -1.71
CTNND1-230ENST00000532245 XP32Q5T750 250 aa4.36□□□□□ -1.71
CTNND1-230ENST00000532245 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
CTNND1-230ENST00000532245 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.72
CTNND1-230ENST00000532245 H3BS24 57 aa4.32□□□□□ -1.72
CTNND1-230ENST00000532245 A8MUU9 505 aa4.32□□□□□ -1.72
CTNND1-230ENST00000532245 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
CTNND1-230ENST00000532245 CUBNO60494 3623 aa4.31□□□□□ -1.72
CTNND1-230ENST00000532245 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
CTNND1-230ENST00000532245 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
CTNND1-230ENST00000532245 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
CTNND1-230ENST00000532245 FBN3Q75N90 2809 aa4.27□□□□□ -1.73
CTNND1-230ENST00000532245 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
CTNND1-230ENST00000532245 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
CTNND1-230ENST00000532245 Q5VV11 94 aa4.19□□□□□ -1.74
CTNND1-230ENST00000532245 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
CTNND1-230ENST00000532245 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
CTNND1-230ENST00000532245 ZNF469Q96JG9 3925 aaPredicted RBP4.14□□□□□ -1.75
CTNND1-230ENST00000532245 HUWE1Q7Z6Z7 4374 aaKnown RBP4.14□□□□□ -1.75
CTNND1-230ENST00000532245 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
CTNND1-230ENST00000532245 COL7A1Q02388 2944 aa4.14□□□□□ -1.75
CTNND1-230ENST00000532245 VPS13CQ709C8 3753 aa4.14□□□□□ -1.75
CTNND1-230ENST00000532245 AKAP9Q99996 3911 aa4.13□□□□□ -1.75
CTNND1-230ENST00000532245 A8MU10 97 aa4.13□□□□□ -1.75
CTNND1-230ENST00000532245 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
CTNND1-230ENST00000532245 ROMO1P60602 79 aa4.11□□□□□ -1.75
CTNND1-230ENST00000532245 MEGF8Q7Z7M0 2845 aa4.07□□□□□ -1.76
CTNND1-230ENST00000532245 MT1HL1P0DM35 61 aa4.04□□□□□ -1.76
CTNND1-230ENST00000532245 DNHD1Q96M86 4753 aa4.02□□□□□ -1.77
CTNND1-230ENST00000532245 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
CTNND1-230ENST00000532245 TNP1P09430 55 aa4□□□□□ -1.77
CTNND1-230ENST00000532245 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
CTNND1-230ENST00000532245 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
CTNND1-230ENST00000532245 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
CTNND1-230ENST00000532245 P0C880 135 aa3.94□□□□□ -1.78
CTNND1-230ENST00000532245 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.78
CTNND1-230ENST00000532245 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
CTNND1-230ENST00000532245 CSMD3Q7Z407 3707 aa3.89□□□□□ -1.79
CTNND1-230ENST00000532245 DNAH5Q8TE73 4624 aa3.85□□□□□ -1.79
CTNND1-230ENST00000532245 H0YAA0 97 aa3.84□□□□□ -1.8
CTNND1-230ENST00000532245 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.8
CTNND1-230ENST00000532245 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
CTNND1-230ENST00000532245 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
CTNND1-230ENST00000532245 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
CTNND1-230ENST00000532245 DNAH1Q9P2D7 4330 aa3.8□□□□□ -1.8
CTNND1-230ENST00000532245 PRKDCP78527 4128 aaKnown RBP3.79□□□□□ -1.8
CTNND1-230ENST00000532245 ANK2Q01484 3957 aa3.77□□□□□ -1.81
CTNND1-230ENST00000532245 DNAH11Q96DT5 4516 aa3.77□□□□□ -1.81
CTNND1-230ENST00000532245 A6NN06 94 aa3.77□□□□□ -1.81
CTNND1-230ENST00000532245 STARD9Q9P2P6 4700 aa3.75□□□□□ -1.81
CTNND1-230ENST00000532245 VPS13DQ5THJ4 4388 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms