RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
CCS-207ENST00000531990 NREPQ16612 68 aa11.12□□□□□ -0.63
CCS-207ENST00000531990 MUC2Q02817 5179 aa11.11□□□□□ -0.63
CCS-207ENST00000531990 NDUFB1O75438 58 aa11.11□□□□□ -0.63
CCS-207ENST00000531990 KRTAP4-1Q9BYQ7 146 aa11.11□□□□□ -0.63
CCS-207ENST00000531990 A0A1B0GVX0 72 aa11.1□□□□□ -0.63
CCS-207ENST00000531990 ATP11AUNQ6ZP68 121 aa11.1□□□□□ -0.63
CCS-207ENST00000531990 C8orf87E5RJ46 101 aa11.08□□□□□ -0.64
CCS-207ENST00000531990 F8W1H4 67 aa11.08□□□□□ -0.64
CCS-207ENST00000531990 C20orf166-AS1Q96NR2 134 aa11.08□□□□□ -0.64
CCS-207ENST00000531990 A8MUU9 505 aa11.07□□□□□ -0.64
CCS-207ENST00000531990 A8MWP4 228 aa11.04□□□□□ -0.64
CCS-207ENST00000531990 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
CCS-207ENST00000531990 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
CCS-207ENST00000531990 IGKV3D-7A0A0C4DH55 119 aa10.97□□□□□ -0.65
CCS-207ENST00000531990 ETDBQ3ZM63 59 aa10.97□□□□□ -0.65
CCS-207ENST00000531990 BPY2O14599 106 aa10.95□□□□□ -0.66
CCS-207ENST00000531990 Q6ZVQ6 151 aa10.95□□□□□ -0.66
CCS-207ENST00000531990 PRR15Q8IV56 129 aa10.95□□□□□ -0.66
CCS-207ENST00000531990 C8orf17Q9NRJ1 99 aa10.95□□□□□ -0.66
CCS-207ENST00000531990 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
CCS-207ENST00000531990 LINC00846Q9NV44 126 aa10.89□□□□□ -0.67
CCS-207ENST00000531990 K7EQZ3 153 aa10.87□□□□□ -0.67
CCS-207ENST00000531990 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
CCS-207ENST00000531990 FAT4Q6V0I7 4981 aa10.82□□□□□ -0.68
CCS-207ENST00000531990 MMP24-AS1A0A0U1RRL7 71 aa10.82□□□□□ -0.68
CCS-207ENST00000531990 A0A1B0GV90 55 aa10.82□□□□□ -0.68
CCS-207ENST00000531990 TMEM254Q8TBM7 123 aa10.81□□□□□ -0.68
CCS-207ENST00000531990 LCE2AQ5TA79 106 aaPredicted RBP10.8□□□□□ -0.68
CCS-207ENST00000531990 hDV103S1A0JD37 113 aa10.79□□□□□ -0.68
CCS-207ENST00000531990 ZCCHC13Q8WW36 166 aaKnown RBP10.79□□□□□ -0.68
CCS-207ENST00000531990 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
CCS-207ENST00000531990 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
CCS-207ENST00000531990 Q8N9L7 120 aa10.78□□□□□ -0.68
CCS-207ENST00000531990 KRTAP19-2Q3LHN2 52 aa10.77□□□□□ -0.69
CCS-207ENST00000531990 LCE2CQ5TA81 110 aa10.75□□□□□ -0.69
CCS-207ENST00000531990 ACYP1P07311 99 aa10.74□□□□□ -0.69
CCS-207ENST00000531990 NDUFS5O43920 106 aa10.72□□□□□ -0.69
CCS-207ENST00000531990 WFDC13Q8IUB5 93 aa10.72□□□□□ -0.69
CCS-207ENST00000531990 CASC2Q6XLA1 102 aa10.71□□□□□ -0.69
CCS-207ENST00000531990 CXCL6P80162 114 aa10.69□□□□□ -0.7
CCS-207ENST00000531990 KRTAP9-2Q9BYQ4 174 aa10.69□□□□□ -0.7
CCS-207ENST00000531990 FAM240AA0A1B0GVK7 77 aa10.68□□□□□ -0.7
CCS-207ENST00000531990 HCG22E2RYF7 251 aa10.65□□□□□ -0.7
CCS-207ENST00000531990 SPINK7P58062 85 aa10.62□□□□□ -0.71
CCS-207ENST00000531990 MT1HP80294 61 aa10.62□□□□□ -0.71
CCS-207ENST00000531990 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
CCS-207ENST00000531990 HRES1P13985 223 aa10.59□□□□□ -0.71
CCS-207ENST00000531990 FAM236DA0A1B0GTK5 79 aa10.58□□□□□ -0.72
CCS-207ENST00000531990 FAM236CP0DP71 79 aa10.58□□□□□ -0.72
CCS-207ENST00000531990 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
CCS-207ENST00000531990 M0R2T5 61 aa10.55□□□□□ -0.72
CCS-207ENST00000531990 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
CCS-207ENST00000531990 J3QR89 54 aa10.52□□□□□ -0.73
CCS-207ENST00000531990 Q5W150 140 aa10.5□□□□□ -0.73
CCS-207ENST00000531990 LINC00643Q86TS7 51 aa10.48□□□□□ -0.73
CCS-207ENST00000531990 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.73
CCS-207ENST00000531990 IGKV2D-30A0A075B6S6 120 aa10.45□□□□□ -0.74
CCS-207ENST00000531990 IGKV2-30P06310 120 aa10.45□□□□□ -0.74
CCS-207ENST00000531990 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
CCS-207ENST00000531990 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
CCS-207ENST00000531990 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
CCS-207ENST00000531990 FLGP20930 4061 aaPredicted RBP10.38□□□□□ -0.75
CCS-207ENST00000531990 KRTAP10-6P60371 365 aaPredicted RBP10.37□□□□□ -0.75
CCS-207ENST00000531990 LORP23490 312 aaPredicted RBP10.33□□□□□ -0.76
CCS-207ENST00000531990 A0A087WVE0 104 aa10.3□□□□□ -0.76
CCS-207ENST00000531990 TRAV22A0A0B4J277 110 aa10.25□□□□□ -0.77
CCS-207ENST00000531990 K7ERU9 68 aa10.25□□□□□ -0.77
CCS-207ENST00000531990 UQCRQO14949 82 aa10.23□□□□□ -0.77
CCS-207ENST00000531990 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
CCS-207ENST00000531990 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
CCS-207ENST00000531990 C4orf26Q17RF5 130 aa10.21□□□□□ -0.77
CCS-207ENST00000531990 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
CCS-207ENST00000531990 H0Y9P7 68 aa10.15□□□□□ -0.78
CCS-207ENST00000531990 ATOX1O00244 68 aa10.15□□□□□ -0.78
CCS-207ENST00000531990 CYP4F30PQ9H0H9 118 aa10.15□□□□□ -0.78
CCS-207ENST00000531990 FSIP2Q5CZC0 6907 aa10.1□□□□□ -0.79
CCS-207ENST00000531990 C1orf64Q8NEQ6 169 aa10.09□□□□□ -0.79
CCS-207ENST00000531990 KRTAP9-8Q9BYQ0 159 aa10.09□□□□□ -0.79
CCS-207ENST00000531990 IMUPQ9GZP8 106 aa10.09□□□□□ -0.79
CCS-207ENST00000531990 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
CCS-207ENST00000531990 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
CCS-207ENST00000531990 MP68P56378 58 aa10.05□□□□□ -0.8
CCS-207ENST00000531990 MT-ATP8P03928 68 aa10.04□□□□□ -0.8
CCS-207ENST00000531990 CRCT1Q9UGL9 99 aa10.04□□□□□ -0.8
CCS-207ENST00000531990 LINC00208Q96KT6 92 aa10.02□□□□□ -0.81
CCS-207ENST00000531990 C5orf47Q569G3 176 aa10.01□□□□□ -0.81
CCS-207ENST00000531990 KRTAP3-1Q9BYR8 98 aa10.01□□□□□ -0.81
CCS-207ENST00000531990 MT2AP02795 61 aa10□□□□□ -0.81
CCS-207ENST00000531990 S4R3F8 94 aa9.96□□□□□ -0.82
CCS-207ENST00000531990 KRTAP10-10P60014 251 aa9.94□□□□□ -0.82
CCS-207ENST00000531990 H3BPC8 53 aa9.93□□□□□ -0.82
CCS-207ENST00000531990 MT1FP04733 61 aa9.91□□□□□ -0.82
CCS-207ENST00000531990 FAM236AA0A1B0GUQ0 79 aa9.9□□□□□ -0.82
CCS-207ENST00000531990 FAM236BA0A1B0GV22 79 aa9.9□□□□□ -0.82
CCS-207ENST00000531990 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
CCS-207ENST00000531990 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
CCS-207ENST00000531990 LCA10Q71F78 164 aa9.86□□□□□ -0.83
CCS-207ENST00000531990 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
CCS-207ENST00000531990 TRAV7A0A075B6U4 112 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms