RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 SETXQ7Z333 2677 aaKnown RBP7.9□□□□□ -1.15
LRRK1-207ENST00000531270 MAP1AP78559 2803 aaPredicted RBP7.89□□□□□ -1.15
LRRK1-207ENST00000531270 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
LRRK1-207ENST00000531270 UNC79Q9P2D8 2635 aa7.85□□□□□ -1.15
LRRK1-207ENST00000531270 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
LRRK1-207ENST00000531270 ASPMQ8IZT6 3477 aa7.82□□□□□ -1.16
LRRK1-207ENST00000531270 XP32Q5T750 250 aa7.81□□□□□ -1.16
LRRK1-207ENST00000531270 NOTCH1P46531 2555 aa7.8□□□□□ -1.16
LRRK1-207ENST00000531270 ZFHX4Q86UP3 3567 aa7.8□□□□□ -1.16
LRRK1-207ENST00000531270 ADGRG4Q8IZF6 3080 aa7.8□□□□□ -1.16
LRRK1-207ENST00000531270 NBEAL2Q6ZNJ1 2754 aa7.78□□□□□ -1.16
LRRK1-207ENST00000531270 GCN1Q92616 2671 aaKnown RBP7.77□□□□□ -1.17
LRRK1-207ENST00000531270 ATMQ13315 3056 aa7.75□□□□□ -1.17
LRRK1-207ENST00000531270 COL6A5A8TX70 2615 aa7.75□□□□□ -1.17
LRRK1-207ENST00000531270 DCHS1Q96JQ0 3298 aa7.75□□□□□ -1.17
LRRK1-207ENST00000531270 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
LRRK1-207ENST00000531270 P0C880 135 aa7.72□□□□□ -1.17
LRRK1-207ENST00000531270 DMXL2Q8TDJ6 3036 aa7.7□□□□□ -1.18
LRRK1-207ENST00000531270 LOC400499M0QZD8 3231 aa7.69□□□□□ -1.18
LRRK1-207ENST00000531270 ZNF292O60281 2723 aa7.69□□□□□ -1.18
LRRK1-207ENST00000531270 H0YAA0 97 aa7.67□□□□□ -1.18
LRRK1-207ENST00000531270 ZZEF1O43149 2961 aa7.65□□□□□ -1.18
LRRK1-207ENST00000531270 TACC2O95359 2948 aa7.64□□□□□ -1.19
LRRK1-207ENST00000531270 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
LRRK1-207ENST00000531270 CSMD1Q96PZ7 3565 aa7.62□□□□□ -1.19
LRRK1-207ENST00000531270 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
LRRK1-207ENST00000531270 ASH1LQ9NR48 2969 aaKnown RBP7.6□□□□□ -1.19
LRRK1-207ENST00000531270 DMDP11532 3685 aa7.59□□□□□ -1.19
LRRK1-207ENST00000531270 BAHCC1Q9P281 2608 aa7.57□□□□□ -1.2
LRRK1-207ENST00000531270 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
LRRK1-207ENST00000531270 LAMA5O15230 3695 aa7.55□□□□□ -1.2
LRRK1-207ENST00000531270 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
LRRK1-207ENST00000531270 DMXL1Q9Y485 3027 aa7.55□□□□□ -1.2
LRRK1-207ENST00000531270 RELNP78509 3460 aa7.55□□□□□ -1.2
LRRK1-207ENST00000531270 NSD1Q96L73 2696 aaPredicted RBP7.52□□□□□ -1.2
LRRK1-207ENST00000531270 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
LRRK1-207ENST00000531270 IGSF10Q6WRI0 2623 aa7.5□□□□□ -1.21
LRRK1-207ENST00000531270 SMG1Q96Q15 3661 aaKnown RBP7.49□□□□□ -1.21
LRRK1-207ENST00000531270 TNRC18O15417 2968 aaPredicted RBP7.48□□□□□ -1.21
LRRK1-207ENST00000531270 CRYBG3Q68DQ2 2970 aa7.45□□□□□ -1.22
LRRK1-207ENST00000531270 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
LRRK1-207ENST00000531270 UBR5O95071 2799 aaPredicted RBP7.43□□□□□ -1.22
LRRK1-207ENST00000531270 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
LRRK1-207ENST00000531270 UTP20O75691 2785 aaKnown RBP7.4□□□□□ -1.22
LRRK1-207ENST00000531270 ITPR2Q14571 2701 aa7.4□□□□□ -1.23
LRRK1-207ENST00000531270 HIVEP1P15822 2718 aa7.38□□□□□ -1.23
LRRK1-207ENST00000531270 SVEP1Q4LDE5 3571 aa7.36□□□□□ -1.23
LRRK1-207ENST00000531270 APCP25054 2843 aa7.34□□□□□ -1.23
LRRK1-207ENST00000531270 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
LRRK1-207ENST00000531270 HRNRQ86YZ3 2850 aaPredicted RBP7.28□□□□□ -1.24
LRRK1-207ENST00000531270 FLNCQ14315 2725 aa7.25□□□□□ -1.25
LRRK1-207ENST00000531270 CELSR2Q9HCU4 2923 aa7.23□□□□□ -1.25
LRRK1-207ENST00000531270 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
LRRK1-207ENST00000531270 NBPF19A0A087WUL8 3843 aa7.19□□□□□ -1.26
LRRK1-207ENST00000531270 CUBNO60494 3623 aa7.18□□□□□ -1.26
LRRK1-207ENST00000531270 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
LRRK1-207ENST00000531270 ZANQ9Y493 2812 aa7.17□□□□□ -1.26
LRRK1-207ENST00000531270 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
LRRK1-207ENST00000531270 FBN2P35556 2912 aa7.16□□□□□ -1.26
LRRK1-207ENST00000531270 MUC3AQ02505 3323 aa7.13□□□□□ -1.27
LRRK1-207ENST00000531270 TENM4Q6N022 2769 aa7.13□□□□□ -1.27
LRRK1-207ENST00000531270 DCHS2Q6V1P9 2916 aa7.12□□□□□ -1.27
LRRK1-207ENST00000531270 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
LRRK1-207ENST00000531270 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
LRRK1-207ENST00000531270 CELSR1Q9NYQ6 3014 aa6.98□□□□□ -1.29
LRRK1-207ENST00000531270 CSMD2Q7Z408 3487 aa6.93□□□□□ -1.3
LRRK1-207ENST00000531270 NF1P21359 2839 aa6.91□□□□□ -1.3
LRRK1-207ENST00000531270 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
LRRK1-207ENST00000531270 BSNQ9UPA5 3926 aa6.88□□□□□ -1.31
LRRK1-207ENST00000531270 TENM1Q9UKZ4 2725 aa6.85□□□□□ -1.31
LRRK1-207ENST00000531270 TGP01266 2768 aa6.84□□□□□ -1.32
LRRK1-207ENST00000531270 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
LRRK1-207ENST00000531270 ZFHX3Q15911 3703 aa6.82□□□□□ -1.32
LRRK1-207ENST00000531270 NIPBLQ6KC79 2804 aaeCLIP6.81□□□□□ -1.32
LRRK1-207ENST00000531270 MXRA5Q9NR99 2828 aa6.81□□□□□ -1.32
LRRK1-207ENST00000531270 TENM3Q9P273 2699 aa6.79□□□□□ -1.32
LRRK1-207ENST00000531270 VPS13CQ709C8 3753 aa6.76□□□□□ -1.33
LRRK1-207ENST00000531270 ANK3Q12955 4377 aaKnown RBP6.75□□□□□ -1.33
LRRK1-207ENST00000531270 INE1O15225 51 aa6.69□□□□□ -1.34
LRRK1-207ENST00000531270 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
LRRK1-207ENST00000531270 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
LRRK1-207ENST00000531270 TRRAPQ9Y4A5 3859 aa6.62□□□□□ -1.35
LRRK1-207ENST00000531270 PDZD2O15018 2839 aa6.58□□□□□ -1.36
LRRK1-207ENST00000531270 VWFP04275 2813 aa6.52□□□□□ -1.37
LRRK1-207ENST00000531270 PKD1L1Q8TDX9 2849 aa6.51□□□□□ -1.37
LRRK1-207ENST00000531270 CSMD3Q7Z407 3707 aa6.5□□□□□ -1.37
LRRK1-207ENST00000531270 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
LRRK1-207ENST00000531270 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
LRRK1-207ENST00000531270 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
LRRK1-207ENST00000531270 HUWE1Q7Z6Z7 4374 aaKnown RBP6.41□□□□□ -1.38
LRRK1-207ENST00000531270 AKAP9Q99996 3911 aa6.4□□□□□ -1.38
LRRK1-207ENST00000531270 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
LRRK1-207ENST00000531270 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
LRRK1-207ENST00000531270 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
LRRK1-207ENST00000531270 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.4
LRRK1-207ENST00000531270 ZNF469Q96JG9 3925 aaPredicted RBP6.32□□□□□ -1.4
LRRK1-207ENST00000531270 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
LRRK1-207ENST00000531270 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
LRRK1-207ENST00000531270 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
LRRK1-207ENST00000531270 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms