RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 FAM208BQ5VWN6 2430 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 ZFYVE26Q68DK2 2539 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 AKAP9Q99996 3911 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 MXRA5Q9NR99 2828 aa2.23□□□□□ -2.05
USP47-209ENST00000530041 ITPR1Q14643 2758 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 ZANQ9Y493 2812 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 A0A0G2JQZ4 141 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 MMP24-AS1A0A0U1RRL7 71 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 A0A1W2PNN7 141 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 RPL37AP61513 92 aaKnown RBP2.22□□□□□ -2.05
USP47-209ENST00000530041 ATP11AUNQ6ZP68 121 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 SMR3AQ99954 134 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 LRRK2Q5S007 2527 aa2.22□□□□□ -2.05
USP47-209ENST00000530041 TEX15Q9BXT5 2789 aa2.21□□□□□ -2.05
USP47-209ENST00000530041 SPTBN4Q9H254 2564 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 EPG5Q9HCE0 2579 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 CHD8Q9HCK8 2581 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 CACNA1AO00555 2505 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 A6NN06 94 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 CHKB-CPT1BH3BT56 60 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 PHF5AQ7RTV0 110 aaKnown RBP2.21□□□□□ -2.06
USP47-209ENST00000530041 COA5Q86WW8 74 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 KRTAP13-1Q8IUC0 172 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 COL12A1Q99715 3063 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 TP53AIP1Q9HCN2 124 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 MAP1AP78559 2803 aaPredicted RBP2.21□□□□□ -2.06
USP47-209ENST00000530041 ITPR3Q14573 2671 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 PIEZO1Q92508 2521 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 VPS13CQ709C8 3753 aa2.21□□□□□ -2.06
USP47-209ENST00000530041 A0A096LNI7 61 aa2.2□□□□□ -2.06
USP47-209ENST00000530041 PRLHP81277 87 aa2.2□□□□□ -2.06
USP47-209ENST00000530041 PRR15LQ9BU68 103 aa2.2□□□□□ -2.06
USP47-209ENST00000530041 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
USP47-209ENST00000530041 UTP20O75691 2785 aaKnown RBP2.2□□□□□ -2.06
USP47-209ENST00000530041 CCDC168Q8NDH2 2452 aa2.19□□□□□ -2.06
USP47-209ENST00000530041 ZNF462Q96JM2 2506 aa2.19□□□□□ -2.06
USP47-209ENST00000530041 Q96NJ1 140 aa2.19□□□□□ -2.06
USP47-209ENST00000530041 CFAP46Q8IYW2 2715 aa2.19□□□□□ -2.06
USP47-209ENST00000530041 IGSF10Q6WRI0 2623 aa2.18□□□□□ -2.06
USP47-209ENST00000530041 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
USP47-209ENST00000530041 CELSR2Q9HCU4 2923 aa2.18□□□□□ -2.06
USP47-209ENST00000530041 ABCA12Q86UK0 2595 aa2.18□□□□□ -2.06
USP47-209ENST00000530041 CRYBG3Q68DQ2 2970 aa2.18□□□□□ -2.06
USP47-209ENST00000530041 ACANP16112 2415 aa2.17□□□□□ -2.06
USP47-209ENST00000530041 FLNCQ14315 2725 aa2.17□□□□□ -2.06
USP47-209ENST00000530041 IGKV2-24A0A0C4DH68 120 aa2.17□□□□□ -2.06
USP47-209ENST00000530041 J3QKU1 62 aa2.17□□□□□ -2.06
USP47-209ENST00000530041 PSORS1C2Q9UIG4 136 aa2.17□□□□□ -2.06
USP47-209ENST00000530041 UBR5O95071 2799 aaPredicted RBP2.17□□□□□ -2.06
USP47-209ENST00000530041 FLNAP21333 2647 aaKnown RBP2.16□□□□□ -2.06
USP47-209ENST00000530041 PCOTHQ58A44 107 aa2.16□□□□□ -2.06
USP47-209ENST00000530041 RETNLBQ9BQ08 111 aa2.16□□□□□ -2.06
USP47-209ENST00000530041 MRPL34Q9BQ48 92 aaKnown RBP2.16□□□□□ -2.06
USP47-209ENST00000530041 MYO18BQ8IUG5 2567 aa2.16□□□□□ -2.06
USP47-209ENST00000530041 MTORP42345 2549 aa2.16□□□□□ -2.06
USP47-209ENST00000530041 PDZD2O15018 2839 aa2.15□□□□□ -2.06
USP47-209ENST00000530041 APCP25054 2843 aa2.15□□□□□ -2.06
USP47-209ENST00000530041 NBPF19A0A087WUL8 3843 aa2.15□□□□□ -2.07
USP47-209ENST00000530041 SPINK7P58062 85 aa2.15□□□□□ -2.07
USP47-209ENST00000530041 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
USP47-209ENST00000530041 SPTSSBQ8NFR3 76 aa2.15□□□□□ -2.07
USP47-209ENST00000530041 DNAH1Q9P2D7 4330 aa2.15□□□□□ -2.07
USP47-209ENST00000530041 SETD2Q9BYW2 2564 aaPredicted RBP2.14□□□□□ -2.07
USP47-209ENST00000530041 USP24Q9UPU5 2620 aa2.14□□□□□ -2.07
USP47-209ENST00000530041 GCN1Q92616 2671 aaKnown RBP2.14□□□□□ -2.07
USP47-209ENST00000530041 SPAG11AQ6PDA7 123 aa2.14□□□□□ -2.07
USP47-209ENST00000530041 NBEAL2Q6ZNJ1 2754 aa2.13□□□□□ -2.07
USP47-209ENST00000530041 ZNF469Q96JG9 3925 aaPredicted RBP2.13□□□□□ -2.07
USP47-209ENST00000530041 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
USP47-209ENST00000530041 C20orf166-AS1Q96NR2 134 aa2.13□□□□□ -2.07
USP47-209ENST00000530041 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
USP47-209ENST00000530041 APLNQ9ULZ1 77 aa2.13□□□□□ -2.07
USP47-209ENST00000530041 NF1P21359 2839 aa2.12□□□□□ -2.07
USP47-209ENST00000530041 ACYP2P14621 99 aa2.12□□□□□ -2.07
USP47-209ENST00000530041 Q6ZRN7 208 aaPredicted RBP2.12□□□□□ -2.07
USP47-209ENST00000530041 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
USP47-209ENST00000530041 KMT2BQ9UMN6 2715 aaPredicted RBP2.12□□□□□ -2.07
USP47-209ENST00000530041 K7EIL1 84 aa2.11□□□□□ -2.07
USP47-209ENST00000530041 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
USP47-209ENST00000530041 DMAC1Q96GE9 116 aa2.11□□□□□ -2.07
USP47-209ENST00000530041 CSMD2Q7Z408 3487 aa2.11□□□□□ -2.07
USP47-209ENST00000530041 HIVEP1P15822 2718 aa2.11□□□□□ -2.07
USP47-209ENST00000530041 F8P00451 2351 aa2.1□□□□□ -2.07
USP47-209ENST00000530041 UNC79Q9P2D8 2635 aa2.1□□□□□ -2.07
USP47-209ENST00000530041 ROMO1P60602 79 aa2.1□□□□□ -2.07
USP47-209ENST00000530041 FBN1P35555 2871 aaKnown RBP2.1□□□□□ -2.07
USP47-209ENST00000530041 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
USP47-209ENST00000530041 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
USP47-209ENST00000530041 C1orf134Q5TEV5 83 aa2.09□□□□□ -2.07
USP47-209ENST00000530041 UBE2DNLQ8IWF7 75 aa2.09□□□□□ -2.07
USP47-209ENST00000530041 NIPBLQ6KC79 2804 aaeCLIP2.09□□□□□ -2.08
USP47-209ENST00000530041 SSBP3-AS1Q7Z2R9 100 aa2.08□□□□□ -2.08
USP47-209ENST00000530041 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
USP47-209ENST00000530041 CUBNO60494 3623 aa2.08□□□□□ -2.08
USP47-209ENST00000530041 DNAH3Q8TD57 4116 aa2.07□□□□□ -2.08
USP47-209ENST00000530041 ALMS1Q8TCU4 4167 aa2.07□□□□□ -2.08
USP47-209ENST00000530041 VWFP04275 2813 aa2.07□□□□□ -2.08
USP47-209ENST00000530041 A0A087WTM6 91 aa2.07□□□□□ -2.08
USP47-209ENST00000530041 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
USP47-209ENST00000530041 CENPEQ02224 2701 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms