RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CASC2Q6XLA1 102 aa8.8□□□□□ -1
NR1H3-231ENST00000529540 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
NR1H3-231ENST00000529540 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
NR1H3-231ENST00000529540 A8MWP4 228 aa8.79□□□□□ -1
NR1H3-231ENST00000529540 EPPK1P58107 5090 aaKnown RBP8.79□□□□□ -1
NR1H3-231ENST00000529540 H0Y9P7 68 aa8.78□□□□□ -1
NR1H3-231ENST00000529540 LINC00208Q96KT6 92 aa8.78□□□□□ -1
NR1H3-231ENST00000529540 LINC00472Q9H8W2 130 aa8.78□□□□□ -1
NR1H3-231ENST00000529540 PRR4Q16378 134 aa8.76□□□□□ -1.01
NR1H3-231ENST00000529540 Q5VSD8 79 aa8.76□□□□□ -1.01
NR1H3-231ENST00000529540 Q8N1X5 172 aa8.76□□□□□ -1.01
NR1H3-231ENST00000529540 ZNF706Q9Y5V0 76 aaPredicted RBP8.76□□□□□ -1.01
NR1H3-231ENST00000529540 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
NR1H3-231ENST00000529540 MMP24-AS1A0A0U1RRL7 71 aa8.71□□□□□ -1.02
NR1H3-231ENST00000529540 PSPHP1O15172 72 aa8.71□□□□□ -1.02
NR1H3-231ENST00000529540 KRTAP10-4P60372 401 aaPredicted RBP8.71□□□□□ -1.02
NR1H3-231ENST00000529540 A8MUN3 132 aa8.68□□□□□ -1.02
NR1H3-231ENST00000529540 Q5VV11 94 aa8.68□□□□□ -1.02
NR1H3-231ENST00000529540 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
NR1H3-231ENST00000529540 RYR1P21817 5038 aa8.68□□□□□ -1.02
NR1H3-231ENST00000529540 ASB16-AS1Q495Z4 193 aa8.67□□□□□ -1.02
NR1H3-231ENST00000529540 HSPG2P98160 4391 aa8.67□□□□□ -1.02
NR1H3-231ENST00000529540 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
NR1H3-231ENST00000529540 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
NR1H3-231ENST00000529540 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.03
NR1H3-231ENST00000529540 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
NR1H3-231ENST00000529540 MOBPQ13875 183 aa8.64□□□□□ -1.03
NR1H3-231ENST00000529540 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
NR1H3-231ENST00000529540 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
NR1H3-231ENST00000529540 BIRC6Q9NR09 4857 aa8.63□□□□□ -1.03
NR1H3-231ENST00000529540 Q96NJ1 140 aa8.62□□□□□ -1.03
NR1H3-231ENST00000529540 FAT1Q14517 4588 aa8.61□□□□□ -1.03
NR1H3-231ENST00000529540 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
NR1H3-231ENST00000529540 COA5Q86WW8 74 aa8.6□□□□□ -1.03
NR1H3-231ENST00000529540 LOC101927531A0A1B0GV80 90 aa8.59□□□□□ -1.03
NR1H3-231ENST00000529540 Q75L30 129 aa8.58□□□□□ -1.04
NR1H3-231ENST00000529540 C8orf17Q9NRJ1 99 aa8.58□□□□□ -1.04
NR1H3-231ENST00000529540 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
NR1H3-231ENST00000529540 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
NR1H3-231ENST00000529540 CHKB-CPT1BH3BT56 60 aa8.55□□□□□ -1.04
NR1H3-231ENST00000529540 KRTAP17-1Q9BYP8 105 aa8.54□□□□□ -1.04
NR1H3-231ENST00000529540 A0A1B0GVX0 72 aa8.53□□□□□ -1.04
NR1H3-231ENST00000529540 CD164Q04900 197 aa8.53□□□□□ -1.04
NR1H3-231ENST00000529540 SRRM2Q9UQ35 2752 aaKnown RBP8.53□□□□□ -1.04
NR1H3-231ENST00000529540 IGLV9-49A0A0B4J1Y8 123 aa8.51□□□□□ -1.05
NR1H3-231ENST00000529540 SEC61GP60059 68 aa8.51□□□□□ -1.05
NR1H3-231ENST00000529540 SSBP3-AS1Q7Z2R9 100 aa8.51□□□□□ -1.05
NR1H3-231ENST00000529540 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
NR1H3-231ENST00000529540 LINC01558Q9Y6Z2 57 aa8.51□□□□□ -1.05
NR1H3-231ENST00000529540 PCOTHQ58A44 107 aa8.5□□□□□ -1.05
NR1H3-231ENST00000529540 A0A087X002 238 aa8.49□□□□□ -1.05
NR1H3-231ENST00000529540 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
NR1H3-231ENST00000529540 MRPL34Q9BQ48 92 aaKnown RBP8.49□□□□□ -1.05
NR1H3-231ENST00000529540 A8MU10 97 aa8.48□□□□□ -1.05
NR1H3-231ENST00000529540 ATP11AUNQ6ZP68 121 aa8.46□□□□□ -1.05
NR1H3-231ENST00000529540 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.05
NR1H3-231ENST00000529540 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.05
NR1H3-231ENST00000529540 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.06
NR1H3-231ENST00000529540 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.06
NR1H3-231ENST00000529540 HERC2O95714 4834 aa8.45□□□□□ -1.06
NR1H3-231ENST00000529540 LCA10Q71F78 164 aa8.45□□□□□ -1.06
NR1H3-231ENST00000529540 A6NED7 52 aa8.43□□□□□ -1.06
NR1H3-231ENST00000529540 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
NR1H3-231ENST00000529540 NDUFS5O43920 106 aa8.43□□□□□ -1.06
NR1H3-231ENST00000529540 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
NR1H3-231ENST00000529540 HRES1P13985 223 aa8.42□□□□□ -1.06
NR1H3-231ENST00000529540 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
NR1H3-231ENST00000529540 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
NR1H3-231ENST00000529540 KRTAP10-8P60410 259 aa8.4□□□□□ -1.07
NR1H3-231ENST00000529540 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
NR1H3-231ENST00000529540 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
NR1H3-231ENST00000529540 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
NR1H3-231ENST00000529540 SPINK1P00995 79 aa8.37□□□□□ -1.07
NR1H3-231ENST00000529540 A6NN06 94 aa8.37□□□□□ -1.07
NR1H3-231ENST00000529540 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
NR1H3-231ENST00000529540 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
NR1H3-231ENST00000529540 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
NR1H3-231ENST00000529540 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
NR1H3-231ENST00000529540 C8orf87E5RJ46 101 aa8.33□□□□□ -1.08
NR1H3-231ENST00000529540 J3QL48 77 aa8.32□□□□□ -1.08
NR1H3-231ENST00000529540 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
NR1H3-231ENST00000529540 Q5W150 140 aa8.3□□□□□ -1.08
NR1H3-231ENST00000529540 SPINK7P58062 85 aa8.28□□□□□ -1.08
NR1H3-231ENST00000529540 LRP1Q07954 4544 aaKnown RBP8.27□□□□□ -1.09
NR1H3-231ENST00000529540 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
NR1H3-231ENST00000529540 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
NR1H3-231ENST00000529540 ACYP2P14621 99 aa8.27□□□□□ -1.09
NR1H3-231ENST00000529540 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
NR1H3-231ENST00000529540 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
NR1H3-231ENST00000529540 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
NR1H3-231ENST00000529540 RBM12B-AS1Q9P1G2 102 aa8.21□□□□□ -1.1
NR1H3-231ENST00000529540 TNXBP22105 4242 aa8.2□□□□□ -1.1
NR1H3-231ENST00000529540 IGKV2-30P06310 120 aa8.17□□□□□ -1.1
NR1H3-231ENST00000529540 LINC00313P59037 77 aa8.17□□□□□ -1.1
NR1H3-231ENST00000529540 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
NR1H3-231ENST00000529540 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
NR1H3-231ENST00000529540 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
NR1H3-231ENST00000529540 A0A1B0GU69 56 aa8.08□□□□□ -1.12
NR1H3-231ENST00000529540 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
NR1H3-231ENST00000529540 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms