RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 KRTAP9-3Q9BYQ3 159 aa12.76□□□□□ -0.37
TRIM3-206ENST00000528227 A0A1B0GVX0 72 aa12.75□□□□□ -0.37
TRIM3-206ENST00000528227 KRTAP10-10P60014 251 aa12.74□□□□□ -0.37
TRIM3-206ENST00000528227 VPS25Q9BRG1 176 aa12.73□□□□□ -0.37
TRIM3-206ENST00000528227 PYY3Q5JQD4 70 aa12.7□□□□□ -0.38
TRIM3-206ENST00000528227 FCGBPQ9Y6R7 5405 aaPredicted RBP12.7□□□□□ -0.38
TRIM3-206ENST00000528227 RBM3P98179 157 aaKnown RBP12.69□□□□□ -0.38
TRIM3-206ENST00000528227 KRTAP19-1Q8IUB9 90 aa12.69□□□□□ -0.38
TRIM3-206ENST00000528227 MTURNQ8N3F0 131 aa12.67□□□□□ -0.38
TRIM3-206ENST00000528227 ZCCHC13Q8WW36 166 aaKnown RBP12.67□□□□□ -0.38
TRIM3-206ENST00000528227 DSCR8Q96T75 97 aa12.66□□□□□ -0.38
TRIM3-206ENST00000528227 J3KT08 172 aa12.62□□□□□ -0.39
TRIM3-206ENST00000528227 SPINK7P58062 85 aa12.62□□□□□ -0.39
TRIM3-206ENST00000528227 SCGB1C2P0DMR2 95 aa12.61□□□□□ -0.39
TRIM3-206ENST00000528227 C21orf62-AS1Q17RA5 79 aa12.59□□□□□ -0.39
TRIM3-206ENST00000528227 UQCR10Q9UDW1 63 aa12.59□□□□□ -0.39
TRIM3-206ENST00000528227 C9JAW5 83 aa12.57□□□□□ -0.4
TRIM3-206ENST00000528227 Q6ZQT0 140 aa12.57□□□□□ -0.4
TRIM3-206ENST00000528227 Q8N9P0 234 aaPredicted RBP12.56□□□□□ -0.4
TRIM3-206ENST00000528227 BAALC-AS2P0C853 105 aa12.55□□□□□ -0.4
TRIM3-206ENST00000528227 NDUFB1O75438 58 aa12.52□□□□□ -0.41
TRIM3-206ENST00000528227 C8orf17Q9NRJ1 99 aa12.47□□□□□ -0.41
TRIM3-206ENST00000528227 A8MWP4 228 aa12.46□□□□□ -0.41
TRIM3-206ENST00000528227 WFDC13Q8IUB5 93 aa12.46□□□□□ -0.41
TRIM3-206ENST00000528227 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
TRIM3-206ENST00000528227 IGKV3D-7A0A0C4DH55 119 aa12.41□□□□□ -0.42
TRIM3-206ENST00000528227 A0A1B0GW54 56 aa12.41□□□□□ -0.42
TRIM3-206ENST00000528227 LOC110117498A0A087WWA1 95 aa12.4□□□□□ -0.42
TRIM3-206ENST00000528227 JMJD7-PLA2G4BH0Y9G9 81 aa12.4□□□□□ -0.42
TRIM3-206ENST00000528227 KRTAP19-6Q3LI70 58 aa12.39□□□□□ -0.43
TRIM3-206ENST00000528227 Q6ZVQ6 151 aa12.37□□□□□ -0.43
TRIM3-206ENST00000528227 LINC00846Q9NV44 126 aa12.37□□□□□ -0.43
TRIM3-206ENST00000528227 ATXN8Q156A1 80 aa12.36□□□□□ -0.43
TRIM3-206ENST00000528227 PDE6GP18545 87 aa12.32□□□□□ -0.44
TRIM3-206ENST00000528227 NAA38Q9BRA0 125 aaKnown RBP12.32□□□□□ -0.44
TRIM3-206ENST00000528227 PRR15Q8IV56 129 aa12.31□□□□□ -0.44
TRIM3-206ENST00000528227 C14orf132Q9NPU4 83 aa12.3□□□□□ -0.44
TRIM3-206ENST00000528227 TMA7Q9Y2S6 64 aaKnown RBP12.29□□□□□ -0.44
TRIM3-206ENST00000528227 MACF1Q9UPN3 7388 aaKnown RBP12.27□□□□□ -0.45
TRIM3-206ENST00000528227 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
TRIM3-206ENST00000528227 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
TRIM3-206ENST00000528227 MRPL34Q9BQ48 92 aaKnown RBP12.25□□□□□ -0.45
TRIM3-206ENST00000528227 M0R143 59 aa12.24□□□□□ -0.45
TRIM3-206ENST00000528227 NREPQ16612 68 aa12.24□□□□□ -0.45
TRIM3-206ENST00000528227 SYNE2Q8WXH0 6885 aaKnown RBP12.22□□□□□ -0.45
TRIM3-206ENST00000528227 H1FX-AS1Q4G0G2 97 aa12.21□□□□□ -0.45
TRIM3-206ENST00000528227 hDV103S1A0JD37 113 aa12.15□□□□□ -0.46
TRIM3-206ENST00000528227 K7EQZ3 153 aa12.14□□□□□ -0.47
TRIM3-206ENST00000528227 NDUFS5O43920 106 aa12.13□□□□□ -0.47
TRIM3-206ENST00000528227 IGKV2D-30A0A075B6S6 120 aa12.06□□□□□ -0.48
TRIM3-206ENST00000528227 IGKV2-30P06310 120 aa12.06□□□□□ -0.48
TRIM3-206ENST00000528227 Q5W150 140 aa12.04□□□□□ -0.48
TRIM3-206ENST00000528227 C7orf65Q6ZTY9 151 aa12.03□□□□□ -0.48
TRIM3-206ENST00000528227 BPY2O14599 106 aa11.98□□□□□ -0.49
TRIM3-206ENST00000528227 KRTAP6-3Q3LI67 103 aa11.98□□□□□ -0.49
TRIM3-206ENST00000528227 H3BT86 120 aa11.97□□□□□ -0.49
TRIM3-206ENST00000528227 BATFQ16520 125 aa11.93□□□□□ -0.5
TRIM3-206ENST00000528227 SMIM6P0DI80 62 aa11.9□□□□□ -0.5
TRIM3-206ENST00000528227 C4orf26Q17RF5 130 aa11.9□□□□□ -0.5
TRIM3-206ENST00000528227 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
TRIM3-206ENST00000528227 HCG22E2RYF7 251 aa11.89□□□□□ -0.51
TRIM3-206ENST00000528227 Q8N9L7 120 aa11.89□□□□□ -0.51
TRIM3-206ENST00000528227 C9orf118A6NHY6 69 aa11.86□□□□□ -0.51
TRIM3-206ENST00000528227 TSTD3H0UI37 97 aa11.83□□□□□ -0.52
TRIM3-206ENST00000528227 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
TRIM3-206ENST00000528227 CXCL6P80162 114 aa11.81□□□□□ -0.52
TRIM3-206ENST00000528227 TAX1BP3O14907 124 aa11.8□□□□□ -0.52
TRIM3-206ENST00000528227 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
TRIM3-206ENST00000528227 FAM236AA0A1B0GUQ0 79 aa11.74□□□□□ -0.53
TRIM3-206ENST00000528227 FAM236BA0A1B0GV22 79 aa11.74□□□□□ -0.53
TRIM3-206ENST00000528227 KRTAP3-1Q9BYR8 98 aa11.74□□□□□ -0.53
TRIM3-206ENST00000528227 MT1BP07438 61 aa11.7□□□□□ -0.54
TRIM3-206ENST00000528227 S4R3F8 94 aa11.69□□□□□ -0.54
TRIM3-206ENST00000528227 A6NN06 94 aa11.68□□□□□ -0.54
TRIM3-206ENST00000528227 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
TRIM3-206ENST00000528227 Q5VV11 94 aa11.64□□□□□ -0.55
TRIM3-206ENST00000528227 CSAG1Q6PB30 78 aa11.64□□□□□ -0.55
TRIM3-206ENST00000528227 SPRR2GQ9BYE4 73 aa11.64□□□□□ -0.55
TRIM3-206ENST00000528227 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
TRIM3-206ENST00000528227 SPCS1Q9Y6A9 102 aa11.63□□□□□ -0.55
TRIM3-206ENST00000528227 KRTAP19-8Q3LI54 63 aa11.62□□□□□ -0.55
TRIM3-206ENST00000528227 LCA10Q71F78 164 aa11.62□□□□□ -0.55
TRIM3-206ENST00000528227 UBL5Q9BZL1 73 aa11.61□□□□□ -0.55
TRIM3-206ENST00000528227 NEBP20929 6669 aa11.52□□□□□ -0.57
TRIM3-206ENST00000528227 KRTAP10-5P60370 271 aa11.49□□□□□ -0.57
TRIM3-206ENST00000528227 PRO0461Q9UI25 63 aa11.49□□□□□ -0.57
TRIM3-206ENST00000528227 KLKP1Q107X0 134 aa11.48□□□□□ -0.57
TRIM3-206ENST00000528227 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
TRIM3-206ENST00000528227 MUC12Q9UKN1 5478 aa11.45□□□□□ -0.58
TRIM3-206ENST00000528227 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
TRIM3-206ENST00000528227 LOC105371267A0A1B0GV96 52 aa11.41□□□□□ -0.58
TRIM3-206ENST00000528227 K7EP34 96 aa11.36□□□□□ -0.59
TRIM3-206ENST00000528227 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
TRIM3-206ENST00000528227 CYP4F30PQ9H0H9 118 aa11.33□□□□□ -0.6
TRIM3-206ENST00000528227 KRTAP5-9P26371 169 aa11.31□□□□□ -0.6
TRIM3-206ENST00000528227 CRIPTQ9P021 101 aa11.3□□□□□ -0.6
TRIM3-206ENST00000528227 A0A087WVE0 104 aa11.29□□□□□ -0.6
TRIM3-206ENST00000528227 KRTAP20-1Q3LI63 56 aa11.25□□□□□ -0.61
TRIM3-206ENST00000528227 IMUPQ9GZP8 106 aa11.22□□□□□ -0.61
TRIM3-206ENST00000528227 TRAV22A0A0B4J277 110 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms