RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 CD164Q04900 197 aa6.4□□□□□ -1.38
PTPMT1-204ENST00000527079 MRPL34Q9BQ48 92 aaKnown RBP6.4□□□□□ -1.38
PTPMT1-204ENST00000527079 V9GYY9 64 aa6.39□□□□□ -1.39
PTPMT1-204ENST00000527079 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
PTPMT1-204ENST00000527079 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
PTPMT1-204ENST00000527079 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
PTPMT1-204ENST00000527079 NDUFS5O43920 106 aa6.37□□□□□ -1.39
PTPMT1-204ENST00000527079 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
PTPMT1-204ENST00000527079 CIRBP-AS1Q8TBR5 109 aa6.36□□□□□ -1.39
PTPMT1-204ENST00000527079 A0A087X002 238 aa6.34□□□□□ -1.39
PTPMT1-204ENST00000527079 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
PTPMT1-204ENST00000527079 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
PTPMT1-204ENST00000527079 C1orf195Q5TG92 126 aa6.33□□□□□ -1.4
PTPMT1-204ENST00000527079 PCOTHQ58A44 107 aa6.33□□□□□ -1.4
PTPMT1-204ENST00000527079 SPINK6Q6UWN8 80 aa6.33□□□□□ -1.4
PTPMT1-204ENST00000527079 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
PTPMT1-204ENST00000527079 Q6ZSA8 131 aa6.32□□□□□ -1.4
PTPMT1-204ENST00000527079 PSPHP1O15172 72 aa6.3□□□□□ -1.4
PTPMT1-204ENST00000527079 COA5Q86WW8 74 aa6.3□□□□□ -1.4
PTPMT1-204ENST00000527079 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
PTPMT1-204ENST00000527079 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
PTPMT1-204ENST00000527079 Q8N9P0 234 aaPredicted RBP6.3□□□□□ -1.4
PTPMT1-204ENST00000527079 PKD1P98161 4303 aa6.29□□□□□ -1.4
PTPMT1-204ENST00000527079 FAT2Q9NYQ8 4349 aa6.27□□□□□ -1.4
PTPMT1-204ENST00000527079 A8MUN3 132 aa6.27□□□□□ -1.41
PTPMT1-204ENST00000527079 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
PTPMT1-204ENST00000527079 LRP1BQ9NZR2 4599 aa6.27□□□□□ -1.41
PTPMT1-204ENST00000527079 KRTAP10-1P60331 282 aa6.27□□□□□ -1.41
PTPMT1-204ENST00000527079 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
PTPMT1-204ENST00000527079 Q5VV11 94 aa6.25□□□□□ -1.41
PTPMT1-204ENST00000527079 Q5W150 140 aa6.25□□□□□ -1.41
PTPMT1-204ENST00000527079 LINC00313P59037 77 aa6.24□□□□□ -1.41
PTPMT1-204ENST00000527079 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
PTPMT1-204ENST00000527079 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
PTPMT1-204ENST00000527079 HRES1P13985 223 aa6.22□□□□□ -1.41
PTPMT1-204ENST00000527079 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
PTPMT1-204ENST00000527079 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
PTPMT1-204ENST00000527079 KRTAP1-4P0C5Y4 121 aa6.2□□□□□ -1.42
PTPMT1-204ENST00000527079 Q75L30 129 aa6.19□□□□□ -1.42
PTPMT1-204ENST00000527079 CHKB-CPT1BH3BT56 60 aa6.19□□□□□ -1.42
PTPMT1-204ENST00000527079 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
PTPMT1-204ENST00000527079 ACYP2P14621 99 aa6.16□□□□□ -1.42
PTPMT1-204ENST00000527079 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
PTPMT1-204ENST00000527079 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
PTPMT1-204ENST00000527079 SPAG11AQ6PDA7 123 aa6.15□□□□□ -1.42
PTPMT1-204ENST00000527079 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.43
PTPMT1-204ENST00000527079 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.43
PTPMT1-204ENST00000527079 SPINK1P00995 79 aa6.14□□□□□ -1.43
PTPMT1-204ENST00000527079 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
PTPMT1-204ENST00000527079 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
PTPMT1-204ENST00000527079 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
PTPMT1-204ENST00000527079 A6NED7 52 aa6.11□□□□□ -1.43
PTPMT1-204ENST00000527079 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
PTPMT1-204ENST00000527079 PKHD1P08F94 4074 aa6.1□□□□□ -1.43
PTPMT1-204ENST00000527079 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
PTPMT1-204ENST00000527079 RETNLBQ9BQ08 111 aa6.09□□□□□ -1.43
PTPMT1-204ENST00000527079 PRR26Q8N8Z3 221 aa6.09□□□□□ -1.44
PTPMT1-204ENST00000527079 A8MU10 97 aa6.07□□□□□ -1.44
PTPMT1-204ENST00000527079 LCA10Q71F78 164 aa6.07□□□□□ -1.44
PTPMT1-204ENST00000527079 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
PTPMT1-204ENST00000527079 ATP11AUNQ6ZP68 121 aa6.05□□□□□ -1.44
PTPMT1-204ENST00000527079 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
PTPMT1-204ENST00000527079 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
PTPMT1-204ENST00000527079 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
PTPMT1-204ENST00000527079 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.44
PTPMT1-204ENST00000527079 SPINK7P58062 85 aa6□□□□□ -1.45
PTPMT1-204ENST00000527079 SPTSSBQ8NFR3 76 aa6□□□□□ -1.45
PTPMT1-204ENST00000527079 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
PTPMT1-204ENST00000527079 APOBP04114 4563 aaKnown RBP5.98□□□□□ -1.45
PTPMT1-204ENST00000527079 C7orf65Q6ZTY9 151 aa5.98□□□□□ -1.45
PTPMT1-204ENST00000527079 A0A1B0GVY2 172 aa5.97□□□□□ -1.45
PTPMT1-204ENST00000527079 SMR3BP02814 79 aaPredicted RBP5.96□□□□□ -1.45
PTPMT1-204ENST00000527079 A0A1B0GU69 56 aa5.96□□□□□ -1.46
PTPMT1-204ENST00000527079 FAT1Q14517 4588 aa5.95□□□□□ -1.46
PTPMT1-204ENST00000527079 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
PTPMT1-204ENST00000527079 A6NN06 94 aa5.93□□□□□ -1.46
PTPMT1-204ENST00000527079 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
PTPMT1-204ENST00000527079 A8MUU9 505 aa5.91□□□□□ -1.46
PTPMT1-204ENST00000527079 KTN1-AS1Q86SY8 53 aa5.91□□□□□ -1.46
PTPMT1-204ENST00000527079 RYR2Q92736 4967 aa5.89□□□□□ -1.47
PTPMT1-204ENST00000527079 C9orf92A6NGG3 77 aa5.87□□□□□ -1.47
PTPMT1-204ENST00000527079 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
PTPMT1-204ENST00000527079 Q8N1X5 172 aa5.87□□□□□ -1.47
PTPMT1-204ENST00000527079 UQCR11O14957 56 aa5.86□□□□□ -1.47
PTPMT1-204ENST00000527079 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
PTPMT1-204ENST00000527079 SEC61GP60059 68 aa5.81□□□□□ -1.48
PTPMT1-204ENST00000527079 FLG2Q5D862 2391 aaPredicted RBP5.79□□□□□ -1.48
PTPMT1-204ENST00000527079 KMT2CQ8NEZ4 4911 aaKnown RBP5.79□□□□□ -1.48
PTPMT1-204ENST00000527079 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
PTPMT1-204ENST00000527079 TNXBP22105 4242 aa5.76□□□□□ -1.49
PTPMT1-204ENST00000527079 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
PTPMT1-204ENST00000527079 LCE2BO14633 110 aa5.75□□□□□ -1.49
PTPMT1-204ENST00000527079 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
PTPMT1-204ENST00000527079 COX6B2Q6YFQ2 88 aa5.71□□□□□ -1.5
PTPMT1-204ENST00000527079 RBM12B-AS1Q9P1G2 102 aa5.71□□□□□ -1.5
PTPMT1-204ENST00000527079 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
PTPMT1-204ENST00000527079 HSPG2P98160 4391 aa5.71□□□□□ -1.5
PTPMT1-204ENST00000527079 Q5VSD8 79 aa5.69□□□□□ -1.5
PTPMT1-204ENST00000527079 J3QL48 77 aa5.66□□□□□ -1.5
PTPMT1-204ENST00000527079 RYR1P21817 5038 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms