RNA–Protein interactions for RNA: ENST00000526245.1

ATXN3-213, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-213ENST00000526245 SYCP2Q9BX26 1530 aa0.4□□□□□ -2.35
ATXN3-213ENST00000526245 H0YGG7 62 aa0.4□□□□□ -2.35
ATXN3-213ENST00000526245 LRRK2Q5S007 2527 aa0.4□□□□□ -2.35
ATXN3-213ENST00000526245 COL12A1Q99715 3063 aa0.4□□□□□ -2.35
ATXN3-213ENST00000526245 STAB2Q8WWQ8 2551 aa0.4□□□□□ -2.35
ATXN3-213ENST00000526245 DOPEY1Q5JWR5 2465 aa0.39□□□□□ -2.35
ATXN3-213ENST00000526245 SERF2P84101 59 aa0.39□□□□□ -2.35
ATXN3-213ENST00000526245 HIVEP1P15822 2718 aa0.39□□□□□ -2.35
ATXN3-213ENST00000526245 PCNTO95613 3336 aa0.39□□□□□ -2.35
ATXN3-213ENST00000526245 GCN1Q92616 2671 aaKnown RBP0.39□□□□□ -2.35
ATXN3-213ENST00000526245 CLASP1Q7Z460 1538 aa0.38□□□□□ -2.35
ATXN3-213ENST00000526245 ACANP16112 2415 aa0.38□□□□□ -2.35
ATXN3-213ENST00000526245 USP9YO00507 2555 aaPredicted RBP0.38□□□□□ -2.35
ATXN3-213ENST00000526245 USH2AO75445 5202 aa0.38□□□□□ -2.35
ATXN3-213ENST00000526245 MINOS1Q5TGZ0 78 aa0.38□□□□□ -2.35
ATXN3-213ENST00000526245 NMES1Q9C002 83 aa0.38□□□□□ -2.35
ATXN3-213ENST00000526245 DCHS2Q6V1P9 2916 aa0.38□□□□□ -2.35
ATXN3-213ENST00000526245 PRRC2CQ9Y520 2896 aaKnown RBP0.37□□□□□ -2.35
ATXN3-213ENST00000526245 M0R1W7 72 aa0.37□□□□□ -2.35
ATXN3-213ENST00000526245 FCER1GP30273 86 aa0.37□□□□□ -2.35
ATXN3-213ENST00000526245 ITPR1Q14643 2758 aa0.36□□□□□ -2.35
ATXN3-213ENST00000526245 FLNBO75369 2602 aaKnown RBP0.36□□□□□ -2.35
ATXN3-213ENST00000526245 A0A0C4DFX4 3053 aa0.36□□□□□ -2.35
ATXN3-213ENST00000526245 FLNCQ14315 2725 aa0.36□□□□□ -2.35
ATXN3-213ENST00000526245 NBASA2RRP1 2371 aa0.35□□□□□ -2.35
ATXN3-213ENST00000526245 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
ATXN3-213ENST00000526245 CSMD1Q96PZ7 3565 aa0.35□□□□□ -2.35
ATXN3-213ENST00000526245 SPRR2BP35325 72 aa0.34□□□□□ -2.36
ATXN3-213ENST00000526245 PCNX1Q96RV3 2341 aa0.34□□□□□ -2.36
ATXN3-213ENST00000526245 HERC2O95714 4834 aa0.34□□□□□ -2.36
ATXN3-213ENST00000526245 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
ATXN3-213ENST00000526245 ACACBO00763 2458 aa0.33□□□□□ -2.36
ATXN3-213ENST00000526245 LYSTQ99698 3801 aa0.33□□□□□ -2.36
ATXN3-213ENST00000526245 BOD1L1Q8NFC6 3051 aa0.33□□□□□ -2.36
ATXN3-213ENST00000526245 COL7A1Q02388 2944 aa0.33□□□□□ -2.36
ATXN3-213ENST00000526245 KALRNO60229 2985 aa0.33□□□□□ -2.36
ATXN3-213ENST00000526245 C6orf48Q9UBA6 75 aa0.33□□□□□ -2.36
ATXN3-213ENST00000526245 A0A1B0GUL6 1792 aa0.32□□□□□ -2.36
ATXN3-213ENST00000526245 CEP350Q5VT06 3117 aa0.32□□□□□ -2.36
ATXN3-213ENST00000526245 RPS27P42677 84 aaKnown RBP0.32□□□□□ -2.36
ATXN3-213ENST00000526245 RPS27LQ71UM5 84 aaKnown RBP0.32□□□□□ -2.36
ATXN3-213ENST00000526245 HECTD4Q9Y4D8 3996 aa0.32□□□□□ -2.36
ATXN3-213ENST00000526245 SZT2Q5T011 3432 aa0.32□□□□□ -2.36
ATXN3-213ENST00000526245 MUC12Q9UKN1 5478 aa0.31□□□□□ -2.36
ATXN3-213ENST00000526245 ADCY10Q96PN6 1610 aa0.31□□□□□ -2.36
ATXN3-213ENST00000526245 PRLHP81277 87 aa0.31□□□□□ -2.36
ATXN3-213ENST00000526245 RIF1Q5UIP0 2472 aaKnown RBP0.3□□□□□ -2.36
ATXN3-213ENST00000526245 MXRA5Q9NR99 2828 aa0.3□□□□□ -2.36
ATXN3-213ENST00000526245 IGIPA6NJ69 53 aa0.3□□□□□ -2.36
ATXN3-213ENST00000526245 CEP290O15078 2479 aa0.3□□□□□ -2.36
ATXN3-213ENST00000526245 TGP01266 2768 aa0.3□□□□□ -2.36
ATXN3-213ENST00000526245 LAMA2P24043 3122 aaKnown RBP0.3□□□□□ -2.36
ATXN3-213ENST00000526245 LAMA3Q16787 3333 aa0.3□□□□□ -2.36
ATXN3-213ENST00000526245 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
ATXN3-213ENST00000526245 HSPG2P98160 4391 aa0.29□□□□□ -2.36
ATXN3-213ENST00000526245 WT1-ASQ06250 92 aa0.29□□□□□ -2.36
ATXN3-213ENST00000526245 UTP20O75691 2785 aaKnown RBP0.28□□□□□ -2.36
ATXN3-213ENST00000526245 ABCA5Q8WWZ7 1642 aa0.28□□□□□ -2.36
ATXN3-213ENST00000526245 DEFB106AQ8N104 65 aa0.28□□□□□ -2.36
ATXN3-213ENST00000526245 S4R3F8 94 aa0.28□□□□□ -2.36
ATXN3-213ENST00000526245 FAT3Q8TDW7 4589 aa0.28□□□□□ -2.36
ATXN3-213ENST00000526245 UNC80Q8N2C7 3258 aa0.28□□□□□ -2.37
ATXN3-213ENST00000526245 VCANP13611 3396 aa0.28□□□□□ -2.37
ATXN3-213ENST00000526245 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
ATXN3-213ENST00000526245 NBEAL1Q6ZS30 2694 aa0.27□□□□□ -2.37
ATXN3-213ENST00000526245 NRXN3Q9Y4C0 1643 aa0.27□□□□□ -2.37
ATXN3-213ENST00000526245 MYO9AB2RTY4 2548 aa0.26□□□□□ -2.37
ATXN3-213ENST00000526245 TEX15Q9BXT5 2789 aa0.26□□□□□ -2.37
ATXN3-213ENST00000526245 MAP1AP78559 2803 aaPredicted RBP0.26□□□□□ -2.37
ATXN3-213ENST00000526245 SPEGQ15772 3267 aa0.26□□□□□ -2.37
ATXN3-213ENST00000526245 DCHS1Q96JQ0 3298 aa0.26□□□□□ -2.37
ATXN3-213ENST00000526245 MUC3AQ02505 3323 aa0.26□□□□□ -2.37
ATXN3-213ENST00000526245 CENPFP49454 3210 aa0.25□□□□□ -2.37
ATXN3-213ENST00000526245 CEP295Q9C0D2 2601 aa0.25□□□□□ -2.37
ATXN3-213ENST00000526245 EP400Q96L91 3159 aa0.24□□□□□ -2.37
ATXN3-213ENST00000526245 CFAP46Q8IYW2 2715 aa0.24□□□□□ -2.37
ATXN3-213ENST00000526245 MGAM2Q2M2H8 2515 aa0.24□□□□□ -2.37
ATXN3-213ENST00000526245 TMEM167BQ9NRX6 74 aa0.24□□□□□ -2.37
ATXN3-213ENST00000526245 LMO7Q8WWI1 1683 aa0.24□□□□□ -2.37
ATXN3-213ENST00000526245 AGLP35573 1532 aa0.23□□□□□ -2.37
ATXN3-213ENST00000526245 FANCD2Q9BXW9 1451 aa0.23□□□□□ -2.37
ATXN3-213ENST00000526245 CFAP47Q6ZTR5 3102 aa0.23□□□□□ -2.37
ATXN3-213ENST00000526245 NF1P21359 2839 aa0.23□□□□□ -2.37
ATXN3-213ENST00000526245 EYSQ5T1H1 3165 aa0.23□□□□□ -2.37
ATXN3-213ENST00000526245 RANBP2P49792 3224 aaKnown RBP0.23□□□□□ -2.37
ATXN3-213ENST00000526245 VPS13BQ7Z7G8 4022 aa0.22□□□□□ -2.37
ATXN3-213ENST00000526245 RELNP78509 3460 aa0.22□□□□□ -2.37
ATXN3-213ENST00000526245 H3BUA1 57 aa0.22□□□□□ -2.37
ATXN3-213ENST00000526245 ZZEF1O43149 2961 aa0.22□□□□□ -2.37
ATXN3-213ENST00000526245 PKD1P98161 4303 aa0.22□□□□□ -2.37
ATXN3-213ENST00000526245 CFAP54Q96N23 3096 aa0.21□□□□□ -2.38
ATXN3-213ENST00000526245 ABCC8Q09428 1581 aa0.21□□□□□ -2.38
ATXN3-213ENST00000526245 LOC400499M0QZD8 3231 aa0.21□□□□□ -2.38
ATXN3-213ENST00000526245 NIPBLQ6KC79 2804 aaeCLIP0.21□□□□□ -2.38
ATXN3-213ENST00000526245 TLN1Q9Y490 2541 aaKnown RBP0.2□□□□□ -2.38
ATXN3-213ENST00000526245 NBEAQ8NFP9 2946 aa0.2□□□□□ -2.38
ATXN3-213ENST00000526245 C9orf92A6NGG3 77 aa0.2□□□□□ -2.38
ATXN3-213ENST00000526245 H0YGX0 51 aa0.2□□□□□ -2.38
ATXN3-213ENST00000526245 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
ATXN3-213ENST00000526245 ITPR2Q14571 2701 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms