RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PRO0461Q9UI25 63 aa9.18□□□□□ -0.94
LMX1B-203ENST00000526117 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
LMX1B-203ENST00000526117 DSCR10P59022 87 aa9.16□□□□□ -0.94
LMX1B-203ENST00000526117 A0A1B0GVX0 72 aa9.15□□□□□ -0.94
LMX1B-203ENST00000526117 KRTAP16-1A8MUX0 517 aa9.15□□□□□ -0.94
LMX1B-203ENST00000526117 C8orf87E5RJ46 101 aa9.15□□□□□ -0.94
LMX1B-203ENST00000526117 GTF2H5Q6ZYL4 71 aa9.15□□□□□ -0.94
LMX1B-203ENST00000526117 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
LMX1B-203ENST00000526117 IGHV6-1A0A0B4J1U7 121 aa9.11□□□□□ -0.95
LMX1B-203ENST00000526117 NREPQ16612 68 aa9.11□□□□□ -0.95
LMX1B-203ENST00000526117 LCE2AQ5TA79 106 aaPredicted RBP9.11□□□□□ -0.95
LMX1B-203ENST00000526117 A8MWP4 228 aa9.1□□□□□ -0.95
LMX1B-203ENST00000526117 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
LMX1B-203ENST00000526117 NDUFB1O75438 58 aa9.09□□□□□ -0.95
LMX1B-203ENST00000526117 F8W1H4 67 aa9.08□□□□□ -0.96
LMX1B-203ENST00000526117 KRTAP19-2Q3LHN2 52 aa9.05□□□□□ -0.96
LMX1B-203ENST00000526117 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
LMX1B-203ENST00000526117 PRR15Q8IV56 129 aa9.02□□□□□ -0.97
LMX1B-203ENST00000526117 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
LMX1B-203ENST00000526117 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
LMX1B-203ENST00000526117 Q6ZVQ6 151 aa8.99□□□□□ -0.97
LMX1B-203ENST00000526117 Q8N9P0 234 aaPredicted RBP8.99□□□□□ -0.97
LMX1B-203ENST00000526117 KRTAP9-2Q9BYQ4 174 aa8.99□□□□□ -0.97
LMX1B-203ENST00000526117 BPY2O14599 106 aa8.96□□□□□ -0.98
LMX1B-203ENST00000526117 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
LMX1B-203ENST00000526117 LINC00846Q9NV44 126 aa8.94□□□□□ -0.98
LMX1B-203ENST00000526117 MMP24-AS1A0A0U1RRL7 71 aa8.93□□□□□ -0.98
LMX1B-203ENST00000526117 K7EQZ3 153 aa8.93□□□□□ -0.98
LMX1B-203ENST00000526117 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
LMX1B-203ENST00000526117 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
LMX1B-203ENST00000526117 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
LMX1B-203ENST00000526117 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
LMX1B-203ENST00000526117 hDV103S1A0JD37 113 aa8.87□□□□□ -0.99
LMX1B-203ENST00000526117 MT1HP80294 61 aa8.87□□□□□ -0.99
LMX1B-203ENST00000526117 COX6B2Q6YFQ2 88 aa8.84□□□□□ -0.99
LMX1B-203ENST00000526117 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
LMX1B-203ENST00000526117 ACYP1P07311 99 aa8.81□□□□□ -1
LMX1B-203ENST00000526117 CXCL6P80162 114 aa8.81□□□□□ -1
LMX1B-203ENST00000526117 MPLKIPQ8TAP9 179 aa8.81□□□□□ -1
LMX1B-203ENST00000526117 Q8N9L7 120 aa8.8□□□□□ -1
LMX1B-203ENST00000526117 HRES1P13985 223 aa8.79□□□□□ -1
LMX1B-203ENST00000526117 CASC2Q6XLA1 102 aa8.78□□□□□ -1
LMX1B-203ENST00000526117 A0A1B0GV90 55 aa8.77□□□□□ -1.01
LMX1B-203ENST00000526117 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
LMX1B-203ENST00000526117 SPINK7P58062 85 aa8.75□□□□□ -1.01
LMX1B-203ENST00000526117 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
LMX1B-203ENST00000526117 KRTAP9-6A0A140TA67 174 aa8.73□□□□□ -1.01
LMX1B-203ENST00000526117 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
LMX1B-203ENST00000526117 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
LMX1B-203ENST00000526117 NDUFS5O43920 106 aa8.71□□□□□ -1.02
LMX1B-203ENST00000526117 ATP5EP2Q5VTU8 51 aa8.69□□□□□ -1.02
LMX1B-203ENST00000526117 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
LMX1B-203ENST00000526117 M0R2T5 61 aa8.65□□□□□ -1.02
LMX1B-203ENST00000526117 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
LMX1B-203ENST00000526117 Q5W150 140 aa8.65□□□□□ -1.02
LMX1B-203ENST00000526117 FAM236DA0A1B0GTK5 79 aa8.64□□□□□ -1.03
LMX1B-203ENST00000526117 FAM236CP0DP71 79 aa8.64□□□□□ -1.03
LMX1B-203ENST00000526117 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
LMX1B-203ENST00000526117 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
LMX1B-203ENST00000526117 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
LMX1B-203ENST00000526117 LINC00643Q86TS7 51 aa8.58□□□□□ -1.04
LMX1B-203ENST00000526117 J3QR89 54 aa8.55□□□□□ -1.04
LMX1B-203ENST00000526117 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
LMX1B-203ENST00000526117 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
LMX1B-203ENST00000526117 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.05
LMX1B-203ENST00000526117 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
LMX1B-203ENST00000526117 KRTAP9-8Q9BYQ0 159 aa8.45□□□□□ -1.06
LMX1B-203ENST00000526117 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
LMX1B-203ENST00000526117 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
LMX1B-203ENST00000526117 TRAV22A0A0B4J277 110 aa8.42□□□□□ -1.06
LMX1B-203ENST00000526117 A0A087WVE0 104 aa8.4□□□□□ -1.06
LMX1B-203ENST00000526117 UQCRQO14949 82 aa8.4□□□□□ -1.06
LMX1B-203ENST00000526117 C4orf26Q17RF5 130 aa8.37□□□□□ -1.07
LMX1B-203ENST00000526117 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
LMX1B-203ENST00000526117 ATOX1O00244 68 aa8.35□□□□□ -1.07
LMX1B-203ENST00000526117 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
LMX1B-203ENST00000526117 K7ERU9 68 aa8.34□□□□□ -1.07
LMX1B-203ENST00000526117 MT2AP02795 61 aa8.33□□□□□ -1.08
LMX1B-203ENST00000526117 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
LMX1B-203ENST00000526117 H0Y9P7 68 aa8.29□□□□□ -1.08
LMX1B-203ENST00000526117 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
LMX1B-203ENST00000526117 IMUPQ9GZP8 106 aa8.29□□□□□ -1.08
LMX1B-203ENST00000526117 C1orf64Q8NEQ6 169 aa8.28□□□□□ -1.08
LMX1B-203ENST00000526117 MT1FP04733 61 aa8.26□□□□□ -1.09
LMX1B-203ENST00000526117 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
LMX1B-203ENST00000526117 MP68P56378 58 aa8.2□□□□□ -1.1
LMX1B-203ENST00000526117 KRTAP10-10P60014 251 aa8.2□□□□□ -1.1
LMX1B-203ENST00000526117 H3BPC8 53 aa8.19□□□□□ -1.1
LMX1B-203ENST00000526117 S4R3F8 94 aa8.19□□□□□ -1.1
LMX1B-203ENST00000526117 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
LMX1B-203ENST00000526117 MT-ATP8P03928 68 aa8.17□□□□□ -1.1
LMX1B-203ENST00000526117 LINC00208Q96KT6 92 aa8.17□□□□□ -1.1
LMX1B-203ENST00000526117 SCGB1A1P11684 91 aa8.16□□□□□ -1.1
LMX1B-203ENST00000526117 LCA10Q71F78 164 aa8.13□□□□□ -1.11
LMX1B-203ENST00000526117 A8MUN3 132 aa8.11□□□□□ -1.11
LMX1B-203ENST00000526117 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
LMX1B-203ENST00000526117 SMIM20Q8N5G0 67 aa8.1□□□□□ -1.11
LMX1B-203ENST00000526117 KLKP1Q107X0 134 aa8.09□□□□□ -1.11
LMX1B-203ENST00000526117 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
LMX1B-203ENST00000526117 USH2AO75445 5202 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms