RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
CCS-202ENST00000525435 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
CCS-202ENST00000525435 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
CCS-202ENST00000525435 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
CCS-202ENST00000525435 IGHV6-1A0A0B4J1U7 121 aa6.63□□□□□ -1.35
CCS-202ENST00000525435 A8MWP4 228 aa6.63□□□□□ -1.35
CCS-202ENST00000525435 ETDBQ3ZM63 59 aa6.63□□□□□ -1.35
CCS-202ENST00000525435 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
CCS-202ENST00000525435 A8MUU9 505 aa6.62□□□□□ -1.35
CCS-202ENST00000525435 DSCR10P59022 87 aa6.62□□□□□ -1.35
CCS-202ENST00000525435 ATP11AUNQ6ZP68 121 aa6.61□□□□□ -1.35
CCS-202ENST00000525435 MUC2Q02817 5179 aa6.61□□□□□ -1.35
CCS-202ENST00000525435 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
CCS-202ENST00000525435 Q6ZVQ6 151 aa6.59□□□□□ -1.35
CCS-202ENST00000525435 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
CCS-202ENST00000525435 PRR15Q8IV56 129 aa6.59□□□□□ -1.35
CCS-202ENST00000525435 IGKV3D-7A0A0C4DH55 119 aa6.58□□□□□ -1.36
CCS-202ENST00000525435 BPY2O14599 106 aa6.58□□□□□ -1.36
CCS-202ENST00000525435 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
CCS-202ENST00000525435 LINC00846Q9NV44 126 aa6.57□□□□□ -1.36
CCS-202ENST00000525435 A0A1B0GV90 55 aa6.56□□□□□ -1.36
CCS-202ENST00000525435 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
CCS-202ENST00000525435 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
CCS-202ENST00000525435 ACYP1P07311 99 aa6.54□□□□□ -1.36
CCS-202ENST00000525435 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
CCS-202ENST00000525435 FAM240AA0A1B0GVK7 77 aa6.51□□□□□ -1.37
CCS-202ENST00000525435 K7EQZ3 153 aa6.5□□□□□ -1.37
CCS-202ENST00000525435 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
CCS-202ENST00000525435 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
CCS-202ENST00000525435 CXCL6P80162 114 aa6.48□□□□□ -1.37
CCS-202ENST00000525435 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
CCS-202ENST00000525435 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
CCS-202ENST00000525435 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
CCS-202ENST00000525435 Q8N9L7 120 aa6.44□□□□□ -1.38
CCS-202ENST00000525435 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
CCS-202ENST00000525435 CASC2Q6XLA1 102 aa6.42□□□□□ -1.38
CCS-202ENST00000525435 ATP5EP2Q5VTU8 51 aa6.41□□□□□ -1.38
CCS-202ENST00000525435 HCG22E2RYF7 251 aa6.4□□□□□ -1.38
CCS-202ENST00000525435 J3QR89 54 aa6.4□□□□□ -1.38
CCS-202ENST00000525435 KRTAP19-2Q3LHN2 52 aa6.4□□□□□ -1.38
CCS-202ENST00000525435 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
CCS-202ENST00000525435 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
CCS-202ENST00000525435 WFDC13Q8IUB5 93 aa6.38□□□□□ -1.39
CCS-202ENST00000525435 NDUFS5O43920 106 aa6.37□□□□□ -1.39
CCS-202ENST00000525435 LINC00643Q86TS7 51 aa6.37□□□□□ -1.39
CCS-202ENST00000525435 SPINK7P58062 85 aa6.35□□□□□ -1.39
CCS-202ENST00000525435 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
CCS-202ENST00000525435 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
CCS-202ENST00000525435 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
CCS-202ENST00000525435 HRES1P13985 223 aa6.31□□□□□ -1.4
CCS-202ENST00000525435 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
CCS-202ENST00000525435 RBM12B-AS1Q9P1G2 102 aa6.31□□□□□ -1.4
CCS-202ENST00000525435 Q5W150 140 aa6.29□□□□□ -1.4
CCS-202ENST00000525435 HIST1H4AP62805 103 aaKnown RBP6.28□□□□□ -1.4
CCS-202ENST00000525435 MT1HP80294 61 aa6.28□□□□□ -1.4
CCS-202ENST00000525435 K7ERU9 68 aa6.25□□□□□ -1.41
CCS-202ENST00000525435 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
CCS-202ENST00000525435 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
CCS-202ENST00000525435 C7orf65Q6ZTY9 151 aa6.24□□□□□ -1.41
CCS-202ENST00000525435 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
CCS-202ENST00000525435 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
CCS-202ENST00000525435 IGKV2D-30A0A075B6S6 120 aa6.21□□□□□ -1.42
CCS-202ENST00000525435 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
CCS-202ENST00000525435 M0R2T5 61 aa6.2□□□□□ -1.42
CCS-202ENST00000525435 UQCRQO14949 82 aa6.19□□□□□ -1.42
CCS-202ENST00000525435 A0A087WVE0 104 aa6.18□□□□□ -1.42
CCS-202ENST00000525435 IMUPQ9GZP8 106 aa6.17□□□□□ -1.42
CCS-202ENST00000525435 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
CCS-202ENST00000525435 ATOX1O00244 68 aa6.13□□□□□ -1.43
CCS-202ENST00000525435 KRTAP10-6P60371 365 aaPredicted RBP6.13□□□□□ -1.43
CCS-202ENST00000525435 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
CCS-202ENST00000525435 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
CCS-202ENST00000525435 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
CCS-202ENST00000525435 CYP4F30PQ9H0H9 118 aa6.12□□□□□ -1.43
CCS-202ENST00000525435 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
CCS-202ENST00000525435 OCR1Q9BZK8 76 aa6.11□□□□□ -1.43
CCS-202ENST00000525435 SCGB1A1P11684 91 aa6.09□□□□□ -1.43
CCS-202ENST00000525435 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
CCS-202ENST00000525435 H0Y9P7 68 aa6.08□□□□□ -1.44
CCS-202ENST00000525435 MT-ATP8P03928 68 aa6.08□□□□□ -1.44
CCS-202ENST00000525435 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
CCS-202ENST00000525435 MP68P56378 58 aa6.06□□□□□ -1.44
CCS-202ENST00000525435 C1orf64Q8NEQ6 169 aa6.05□□□□□ -1.44
CCS-202ENST00000525435 H3BPC8 53 aa6.03□□□□□ -1.44
CCS-202ENST00000525435 SMIM20Q8N5G0 67 aa6.02□□□□□ -1.45
CCS-202ENST00000525435 LINC00208Q96KT6 92 aa6.02□□□□□ -1.45
CCS-202ENST00000525435 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
CCS-202ENST00000525435 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
CCS-202ENST00000525435 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
CCS-202ENST00000525435 FAM236AA0A1B0GUQ0 79 aa5.97□□□□□ -1.45
CCS-202ENST00000525435 FAM236BA0A1B0GV22 79 aa5.97□□□□□ -1.45
CCS-202ENST00000525435 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
CCS-202ENST00000525435 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
CCS-202ENST00000525435 A8MUN3 132 aa5.93□□□□□ -1.46
CCS-202ENST00000525435 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
CCS-202ENST00000525435 S4R3F8 94 aa5.92□□□□□ -1.46
CCS-202ENST00000525435 MT2AP02795 61 aa5.91□□□□□ -1.46
CCS-202ENST00000525435 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
CCS-202ENST00000525435 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
CCS-202ENST00000525435 LCA10Q71F78 164 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms