RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 DEFB116Q30KQ4 102 aa2.92□□□□□ -1.94
HMGB1P40-201ENST00000525121 C8orf87E5RJ46 101 aa2.91□□□□□ -1.94
HMGB1P40-201ENST00000525121 DSCR10P59022 87 aa2.91□□□□□ -1.94
HMGB1P40-201ENST00000525121 NREPQ16612 68 aa2.91□□□□□ -1.94
HMGB1P40-201ENST00000525121 Q75L30 129 aa2.91□□□□□ -1.94
HMGB1P40-201ENST00000525121 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
HMGB1P40-201ENST00000525121 A0A1B0GVX0 72 aa2.9□□□□□ -1.95
HMGB1P40-201ENST00000525121 C20orf166-AS1Q96NR2 134 aa2.89□□□□□ -1.95
HMGB1P40-201ENST00000525121 A8MWP4 228 aa2.88□□□□□ -1.95
HMGB1P40-201ENST00000525121 A8MUU9 505 aa2.87□□□□□ -1.95
HMGB1P40-201ENST00000525121 F8W1H4 67 aa2.87□□□□□ -1.95
HMGB1P40-201ENST00000525121 BPY2O14599 106 aa2.87□□□□□ -1.95
HMGB1P40-201ENST00000525121 UBL5Q9BZL1 73 aa2.87□□□□□ -1.95
HMGB1P40-201ENST00000525121 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
HMGB1P40-201ENST00000525121 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
HMGB1P40-201ENST00000525121 PRO0461Q9UI25 63 aa2.86□□□□□ -1.95
HMGB1P40-201ENST00000525121 IGKV3D-7A0A0C4DH55 119 aa2.85□□□□□ -1.95
HMGB1P40-201ENST00000525121 A0A1B0GV90 55 aa2.85□□□□□ -1.95
HMGB1P40-201ENST00000525121 KRTAP16-1A8MUX0 517 aa2.85□□□□□ -1.95
HMGB1P40-201ENST00000525121 Q6ZVQ6 151 aa2.85□□□□□ -1.95
HMGB1P40-201ENST00000525121 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
HMGB1P40-201ENST00000525121 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
HMGB1P40-201ENST00000525121 NOTCH2NLQ7Z3S9 236 aa2.84□□□□□ -1.95
HMGB1P40-201ENST00000525121 K7EQZ3 153 aa2.83□□□□□ -1.96
HMGB1P40-201ENST00000525121 NDUFS5O43920 106 aa2.83□□□□□ -1.96
HMGB1P40-201ENST00000525121 ETDBQ3ZM63 59 aa2.83□□□□□ -1.96
HMGB1P40-201ENST00000525121 hDV103S1A0JD37 113 aa2.82□□□□□ -1.96
HMGB1P40-201ENST00000525121 TMEM254Q8TBM7 123 aa2.82□□□□□ -1.96
HMGB1P40-201ENST00000525121 ZCCHC13Q8WW36 166 aaKnown RBP2.82□□□□□ -1.96
HMGB1P40-201ENST00000525121 MRPL34Q9BQ48 92 aaKnown RBP2.82□□□□□ -1.96
HMGB1P40-201ENST00000525121 LINC00846Q9NV44 126 aa2.82□□□□□ -1.96
HMGB1P40-201ENST00000525121 MUC17Q685J3 4493 aa2.82□□□□□ -1.96
HMGB1P40-201ENST00000525121 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 FAM236DA0A1B0GTK5 79 aa2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 FAM236CP0DP71 79 aa2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 CASC2Q6XLA1 102 aa2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 Q8N9P0 234 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 RBM12B-AS1Q9P1G2 102 aa2.81□□□□□ -1.96
HMGB1P40-201ENST00000525121 M0R2T5 61 aa2.8□□□□□ -1.96
HMGB1P40-201ENST00000525121 ACYP1P07311 99 aa2.8□□□□□ -1.96
HMGB1P40-201ENST00000525121 LCE2AQ5TA79 106 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P40-201ENST00000525121 Q8N9L7 120 aa2.8□□□□□ -1.96
HMGB1P40-201ENST00000525121 MUC2Q02817 5179 aa2.79□□□□□ -1.96
HMGB1P40-201ENST00000525121 CXCL6P80162 114 aa2.79□□□□□ -1.96
HMGB1P40-201ENST00000525121 WFDC13Q8IUB5 93 aa2.79□□□□□ -1.96
HMGB1P40-201ENST00000525121 FAM240AA0A1B0GVK7 77 aa2.78□□□□□ -1.96
HMGB1P40-201ENST00000525121 HCG22E2RYF7 251 aa2.78□□□□□ -1.96
HMGB1P40-201ENST00000525121 ATP5EP2Q5VTU8 51 aa2.78□□□□□ -1.96
HMGB1P40-201ENST00000525121 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
HMGB1P40-201ENST00000525121 SPINK7P58062 85 aa2.77□□□□□ -1.97
HMGB1P40-201ENST00000525121 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
HMGB1P40-201ENST00000525121 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
HMGB1P40-201ENST00000525121 J3QR89 54 aa2.76□□□□□ -1.97
HMGB1P40-201ENST00000525121 LCE2BO14633 110 aa2.76□□□□□ -1.97
HMGB1P40-201ENST00000525121 MT1HP80294 61 aa2.76□□□□□ -1.97
HMGB1P40-201ENST00000525121 IGKV2D-30A0A075B6S6 120 aa2.74□□□□□ -1.97
HMGB1P40-201ENST00000525121 IGKV2-30P06310 120 aa2.74□□□□□ -1.97
HMGB1P40-201ENST00000525121 HRES1P13985 223 aa2.74□□□□□ -1.97
HMGB1P40-201ENST00000525121 HIST1H4AP62805 103 aaKnown RBP2.74□□□□□ -1.97
HMGB1P40-201ENST00000525121 C7orf65Q6ZTY9 151 aa2.74□□□□□ -1.97
HMGB1P40-201ENST00000525121 TP53AIP1Q9HCN2 124 aa2.74□□□□□ -1.97
HMGB1P40-201ENST00000525121 LINC00643Q86TS7 51 aa2.73□□□□□ -1.97
HMGB1P40-201ENST00000525121 MPLKIPQ8TAP9 179 aa2.72□□□□□ -1.97
HMGB1P40-201ENST00000525121 C5orf47Q569G3 176 aa2.71□□□□□ -1.98
HMGB1P40-201ENST00000525121 Q5W150 140 aa2.71□□□□□ -1.98
HMGB1P40-201ENST00000525121 FAT4Q6V0I7 4981 aa2.71□□□□□ -1.98
HMGB1P40-201ENST00000525121 KRTAP10-6P60371 365 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P40-201ENST00000525121 TRAV22A0A0B4J277 110 aa2.69□□□□□ -1.98
HMGB1P40-201ENST00000525121 K7ERU9 68 aa2.69□□□□□ -1.98
HMGB1P40-201ENST00000525121 ATOX1O00244 68 aa2.68□□□□□ -1.98
HMGB1P40-201ENST00000525121 UQCRQO14949 82 aa2.68□□□□□ -1.98
HMGB1P40-201ENST00000525121 LORP23490 312 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P40-201ENST00000525121 KRTAP9-2Q9BYQ4 174 aa2.68□□□□□ -1.98
HMGB1P40-201ENST00000525121 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
HMGB1P40-201ENST00000525121 A0A087WVE0 104 aa2.66□□□□□ -1.98
HMGB1P40-201ENST00000525121 LOC101927531A0A1B0GV80 90 aa2.66□□□□□ -1.98
HMGB1P40-201ENST00000525121 C4orf26Q17RF5 130 aa2.66□□□□□ -1.98
HMGB1P40-201ENST00000525121 H0Y9P7 68 aa2.65□□□□□ -1.99
HMGB1P40-201ENST00000525121 H3BS24 57 aa2.65□□□□□ -1.99
HMGB1P40-201ENST00000525121 MP68P56378 58 aa2.64□□□□□ -1.99
HMGB1P40-201ENST00000525121 C1orf64Q8NEQ6 169 aa2.64□□□□□ -1.99
HMGB1P40-201ENST00000525121 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
HMGB1P40-201ENST00000525121 IMUPQ9GZP8 106 aa2.62□□□□□ -1.99
HMGB1P40-201ENST00000525121 S4R3F8 94 aa2.62□□□□□ -1.99
HMGB1P40-201ENST00000525121 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
HMGB1P40-201ENST00000525121 SEC61GP60059 68 aa2.61□□□□□ -1.99
HMGB1P40-201ENST00000525121 LINC00208Q96KT6 92 aa2.61□□□□□ -1.99
HMGB1P40-201ENST00000525121 OCR1Q9BZK8 76 aa2.61□□□□□ -1.99
HMGB1P40-201ENST00000525121 H3BPC8 53 aa2.6□□□□□ -1.99
HMGB1P40-201ENST00000525121 MT2AP02795 61 aa2.6□□□□□ -1.99
HMGB1P40-201ENST00000525121 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
HMGB1P40-201ENST00000525121 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
HMGB1P40-201ENST00000525121 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P40-201ENST00000525121 CSAG1Q6PB30 78 aa2.59□□□□□ -1.99
HMGB1P40-201ENST00000525121 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
HMGB1P40-201ENST00000525121 FAM236AA0A1B0GUQ0 79 aa2.58□□□□□ -2
HMGB1P40-201ENST00000525121 FAM236BA0A1B0GV22 79 aa2.58□□□□□ -2
HMGB1P40-201ENST00000525121 A8MUN3 132 aa2.58□□□□□ -2
HMGB1P40-201ENST00000525121 MT-ATP8P03928 68 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms