RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RPL37P61927 97 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-202ENST00000524955 Q8N9L7 120 aa2.46□□□□□ -2.02
CHMP4A-202ENST00000524955 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
CHMP4A-202ENST00000524955 IGKV3D-7A0A0C4DH55 119 aa2.45□□□□□ -2.02
CHMP4A-202ENST00000524955 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
CHMP4A-202ENST00000524955 Q6ZVQ6 151 aa2.45□□□□□ -2.02
CHMP4A-202ENST00000524955 LINC00846Q9NV44 126 aa2.45□□□□□ -2.02
CHMP4A-202ENST00000524955 K7EQZ3 153 aa2.44□□□□□ -2.02
CHMP4A-202ENST00000524955 BPY2O14599 106 aa2.44□□□□□ -2.02
CHMP4A-202ENST00000524955 A8MUU9 505 aa2.43□□□□□ -2.02
CHMP4A-202ENST00000524955 A8MWP4 228 aa2.43□□□□□ -2.02
CHMP4A-202ENST00000524955 J3KT08 172 aa2.43□□□□□ -2.02
CHMP4A-202ENST00000524955 NDUFB1O75438 58 aa2.43□□□□□ -2.02
CHMP4A-202ENST00000524955 C8orf17Q9NRJ1 99 aa2.43□□□□□ -2.02
CHMP4A-202ENST00000524955 A0A1B0GW54 56 aa2.42□□□□□ -2.02
CHMP4A-202ENST00000524955 C21orf62-AS1Q17RA5 79 aa2.42□□□□□ -2.02
CHMP4A-202ENST00000524955 ATP11AUNQ6ZP68 121 aa2.42□□□□□ -2.02
CHMP4A-202ENST00000524955 Q75L30 129 aa2.42□□□□□ -2.02
CHMP4A-202ENST00000524955 PRR15Q8IV56 129 aa2.42□□□□□ -2.02
CHMP4A-202ENST00000524955 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
CHMP4A-202ENST00000524955 MMP24-AS1A0A0U1RRL7 71 aa2.41□□□□□ -2.02
CHMP4A-202ENST00000524955 C8orf87E5RJ46 101 aa2.41□□□□□ -2.02
CHMP4A-202ENST00000524955 WFDC13Q8IUB5 93 aa2.41□□□□□ -2.02
CHMP4A-202ENST00000524955 UBL5Q9BZL1 73 aa2.41□□□□□ -2.02
CHMP4A-202ENST00000524955 MUC2Q02817 5179 aa2.4□□□□□ -2.02
CHMP4A-202ENST00000524955 NDUFS5O43920 106 aa2.4□□□□□ -2.03
CHMP4A-202ENST00000524955 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
CHMP4A-202ENST00000524955 hDV103S1A0JD37 113 aa2.39□□□□□ -2.03
CHMP4A-202ENST00000524955 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
CHMP4A-202ENST00000524955 LCE2CQ5TA81 110 aa2.38□□□□□ -2.03
CHMP4A-202ENST00000524955 CASC2Q6XLA1 102 aa2.38□□□□□ -2.03
CHMP4A-202ENST00000524955 Q8N9P0 234 aaPredicted RBP2.38□□□□□ -2.03
CHMP4A-202ENST00000524955 ZCCHC13Q8WW36 166 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-202ENST00000524955 MRPL34Q9BQ48 92 aaKnown RBP2.38□□□□□ -2.03
CHMP4A-202ENST00000524955 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
CHMP4A-202ENST00000524955 HCG22E2RYF7 251 aa2.37□□□□□ -2.03
CHMP4A-202ENST00000524955 TMEM254Q8TBM7 123 aa2.37□□□□□ -2.03
CHMP4A-202ENST00000524955 A0A087WVE0 104 aa2.36□□□□□ -2.03
CHMP4A-202ENST00000524955 ACYP1P07311 99 aa2.36□□□□□ -2.03
CHMP4A-202ENST00000524955 Q5W150 140 aa2.36□□□□□ -2.03
CHMP4A-202ENST00000524955 COX6B2Q6YFQ2 88 aa2.36□□□□□ -2.03
CHMP4A-202ENST00000524955 SPINK7P58062 85 aa2.35□□□□□ -2.03
CHMP4A-202ENST00000524955 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-202ENST00000524955 MT1HP80294 61 aa2.35□□□□□ -2.03
CHMP4A-202ENST00000524955 LCE2AQ5TA79 106 aaPredicted RBP2.35□□□□□ -2.03
CHMP4A-202ENST00000524955 FAM240AA0A1B0GVK7 77 aa2.34□□□□□ -2.03
CHMP4A-202ENST00000524955 HRES1P13985 223 aa2.34□□□□□ -2.03
CHMP4A-202ENST00000524955 CXCL6P80162 114 aa2.34□□□□□ -2.03
CHMP4A-202ENST00000524955 IGKV2D-30A0A075B6S6 120 aa2.33□□□□□ -2.04
CHMP4A-202ENST00000524955 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
CHMP4A-202ENST00000524955 IGKV2-30P06310 120 aa2.33□□□□□ -2.04
CHMP4A-202ENST00000524955 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
CHMP4A-202ENST00000524955 LINC00643Q86TS7 51 aa2.33□□□□□ -2.04
CHMP4A-202ENST00000524955 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
CHMP4A-202ENST00000524955 M0R2T5 61 aa2.32□□□□□ -2.04
CHMP4A-202ENST00000524955 J3QR89 54 aa2.31□□□□□ -2.04
CHMP4A-202ENST00000524955 ATP5EP2Q5VTU8 51 aa2.31□□□□□ -2.04
CHMP4A-202ENST00000524955 MT-ATP8P03928 68 aa2.3□□□□□ -2.04
CHMP4A-202ENST00000524955 MPLKIPQ8TAP9 179 aa2.3□□□□□ -2.04
CHMP4A-202ENST00000524955 RBM12B-AS1Q9P1G2 102 aa2.3□□□□□ -2.04
CHMP4A-202ENST00000524955 C4orf26Q17RF5 130 aa2.29□□□□□ -2.04
CHMP4A-202ENST00000524955 C7orf65Q6ZTY9 151 aa2.29□□□□□ -2.04
CHMP4A-202ENST00000524955 K7ERU9 68 aa2.28□□□□□ -2.04
CHMP4A-202ENST00000524955 KRTAP10-6P60371 365 aaPredicted RBP2.28□□□□□ -2.04
CHMP4A-202ENST00000524955 TP53AIP1Q9HCN2 124 aa2.27□□□□□ -2.05
CHMP4A-202ENST00000524955 TRAV22A0A0B4J277 110 aa2.26□□□□□ -2.05
CHMP4A-202ENST00000524955 H0Y9P7 68 aa2.26□□□□□ -2.05
CHMP4A-202ENST00000524955 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
CHMP4A-202ENST00000524955 UQCRQO14949 82 aa2.25□□□□□ -2.05
CHMP4A-202ENST00000524955 SCGB1A1P11684 91 aa2.25□□□□□ -2.05
CHMP4A-202ENST00000524955 KRTAP3-1Q9BYR8 98 aa2.25□□□□□ -2.05
CHMP4A-202ENST00000524955 CYP4F30PQ9H0H9 118 aa2.25□□□□□ -2.05
CHMP4A-202ENST00000524955 FAM236AA0A1B0GUQ0 79 aa2.24□□□□□ -2.05
CHMP4A-202ENST00000524955 FAM236BA0A1B0GV22 79 aa2.24□□□□□ -2.05
CHMP4A-202ENST00000524955 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
CHMP4A-202ENST00000524955 C1orf64Q8NEQ6 169 aa2.24□□□□□ -2.05
CHMP4A-202ENST00000524955 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
CHMP4A-202ENST00000524955 OCR1Q9BZK8 76 aa2.24□□□□□ -2.05
CHMP4A-202ENST00000524955 LOC101927531A0A1B0GV80 90 aa2.23□□□□□ -2.05
CHMP4A-202ENST00000524955 KLKP1Q107X0 134 aa2.23□□□□□ -2.05
CHMP4A-202ENST00000524955 KRTAP9-8Q9BYQ0 159 aa2.23□□□□□ -2.05
CHMP4A-202ENST00000524955 KRTAP9-2Q9BYQ4 174 aa2.23□□□□□ -2.05
CHMP4A-202ENST00000524955 MT2AP02795 61 aa2.22□□□□□ -2.05
CHMP4A-202ENST00000524955 C5orf47Q569G3 176 aa2.22□□□□□ -2.05
CHMP4A-202ENST00000524955 FLGP20930 4061 aaPredicted RBP2.22□□□□□ -2.05
CHMP4A-202ENST00000524955 ATOX1O00244 68 aa2.21□□□□□ -2.06
CHMP4A-202ENST00000524955 MT1FP04733 61 aa2.21□□□□□ -2.06
CHMP4A-202ENST00000524955 MP68P56378 58 aa2.21□□□□□ -2.06
CHMP4A-202ENST00000524955 IMUPQ9GZP8 106 aa2.21□□□□□ -2.06
CHMP4A-202ENST00000524955 LCA10Q71F78 164 aa2.2□□□□□ -2.06
CHMP4A-202ENST00000524955 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
CHMP4A-202ENST00000524955 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
CHMP4A-202ENST00000524955 S4R3F8 94 aa2.19□□□□□ -2.06
CHMP4A-202ENST00000524955 TRAV7A0A075B6U4 112 aa2.18□□□□□ -2.06
CHMP4A-202ENST00000524955 LCE2DQ5TA82 110 aaPredicted RBP2.18□□□□□ -2.06
CHMP4A-202ENST00000524955 KRTAP3-3Q9BYR6 98 aa2.17□□□□□ -2.06
CHMP4A-202ENST00000524955 C20orf197Q8N268 126 aa2.16□□□□□ -2.06
CHMP4A-202ENST00000524955 H3BPC8 53 aa2.15□□□□□ -2.07
CHMP4A-202ENST00000524955 CSAG1Q6PB30 78 aa2.15□□□□□ -2.07
CHMP4A-202ENST00000524955 SMIM20Q8N5G0 67 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms