RNA–Protein interactions for RNA: ENST00000522727.5

RAB11FIP1-203, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-203ENST00000522727 V9GYY9 64 aa13.67□□□□□ -0.22
RAB11FIP1-203ENST00000522727 IGHV6-1A0A0B4J1U7 121 aa13.66□□□□□ -0.22
RAB11FIP1-203ENST00000522727 MRPL34Q9BQ48 92 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP1-203ENST00000522727 ANAPC11Q9NYG5 84 aa13.66□□□□□ -0.22
RAB11FIP1-203ENST00000522727 DNAH11Q96DT5 4516 aa13.66□□□□□ -0.22
RAB11FIP1-203ENST00000522727 IGLV7-46A0A075B6I9 117 aa13.65□□□□□ -0.22
RAB11FIP1-203ENST00000522727 SSBP3-AS1Q7Z2R9 100 aa13.65□□□□□ -0.22
RAB11FIP1-203ENST00000522727 KRTAP10-2P60368 255 aa13.6□□□□□ -0.23
RAB11FIP1-203ENST00000522727 PKD1P98161 4303 aa13.6□□□□□ -0.23
RAB11FIP1-203ENST00000522727 C1orf195Q5TG92 126 aa13.58□□□□□ -0.24
RAB11FIP1-203ENST00000522727 CIRBP-AS1Q8TBR5 109 aa13.55□□□□□ -0.24
RAB11FIP1-203ENST00000522727 RYR3Q15413 4870 aa13.55□□□□□ -0.24
RAB11FIP1-203ENST00000522727 BRK1Q8WUW1 75 aa13.55□□□□□ -0.24
RAB11FIP1-203ENST00000522727 Q6ZSA8 131 aa13.54□□□□□ -0.24
RAB11FIP1-203ENST00000522727 DNAH5Q8TE73 4624 aa13.53□□□□□ -0.24
RAB11FIP1-203ENST00000522727 NDUFS5O43920 106 aa13.53□□□□□ -0.24
RAB11FIP1-203ENST00000522727 C8orf87E5RJ46 101 aa13.53□□□□□ -0.24
RAB11FIP1-203ENST00000522727 A0A087X002 238 aa13.5□□□□□ -0.25
RAB11FIP1-203ENST00000522727 NOTCH2NLQ7Z3S9 236 aa13.5□□□□□ -0.25
RAB11FIP1-203ENST00000522727 LIMD2Q9BT23 127 aa13.48□□□□□ -0.25
RAB11FIP1-203ENST00000522727 LOC101927531A0A1B0GV80 90 aa13.47□□□□□ -0.25
RAB11FIP1-203ENST00000522727 A0A1B0GVY2 172 aa13.46□□□□□ -0.26
RAB11FIP1-203ENST00000522727 COA5Q86WW8 74 aa13.46□□□□□ -0.26
RAB11FIP1-203ENST00000522727 Q8N9P0 234 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP1-203ENST00000522727 KRTAP13-3Q3SY46 172 aa13.44□□□□□ -0.26
RAB11FIP1-203ENST00000522727 PCOTHQ58A44 107 aa13.44□□□□□ -0.26
RAB11FIP1-203ENST00000522727 SPINK6Q6UWN8 80 aa13.43□□□□□ -0.26
RAB11FIP1-203ENST00000522727 PKHD1P08F94 4074 aa13.43□□□□□ -0.26
RAB11FIP1-203ENST00000522727 KRTAP10-1P60331 282 aa13.41□□□□□ -0.26
RAB11FIP1-203ENST00000522727 PSPHP1O15172 72 aa13.4□□□□□ -0.26
RAB11FIP1-203ENST00000522727 A8MUN3 132 aa13.36□□□□□ -0.27
RAB11FIP1-203ENST00000522727 KRTAP13-2Q52LG2 175 aa13.36□□□□□ -0.27
RAB11FIP1-203ENST00000522727 Q5VV11 94 aa13.34□□□□□ -0.27
RAB11FIP1-203ENST00000522727 Q5W150 140 aa13.33□□□□□ -0.27
RAB11FIP1-203ENST00000522727 LINC00313P59037 77 aa13.31□□□□□ -0.28
RAB11FIP1-203ENST00000522727 LRP1BQ9NZR2 4599 aa13.29□□□□□ -0.28
RAB11FIP1-203ENST00000522727 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP1-203ENST00000522727 FAM229AH3BQW9 127 aa13.28□□□□□ -0.28
RAB11FIP1-203ENST00000522727 KRTAP1-4P0C5Y4 121 aa13.27□□□□□ -0.28
RAB11FIP1-203ENST00000522727 HRES1P13985 223 aa13.26□□□□□ -0.29
RAB11FIP1-203ENST00000522727 Q75L30 129 aa13.25□□□□□ -0.29
RAB11FIP1-203ENST00000522727 PRR15LQ9BU68 103 aa13.23□□□□□ -0.29
RAB11FIP1-203ENST00000522727 LINC01558Q9Y6Z2 57 aa13.23□□□□□ -0.29
RAB11FIP1-203ENST00000522727 KRTAP16-1A8MUX0 517 aa13.18□□□□□ -0.3
RAB11FIP1-203ENST00000522727 CHKB-CPT1BH3BT56 60 aa13.17□□□□□ -0.3
RAB11FIP1-203ENST00000522727 ACYP2P14621 99 aa13.14□□□□□ -0.31
RAB11FIP1-203ENST00000522727 APOBP04114 4563 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP1-203ENST00000522727 SPINK1P00995 79 aa13.12□□□□□ -0.31
RAB11FIP1-203ENST00000522727 IGKV2-30P06310 120 aa13.12□□□□□ -0.31
RAB11FIP1-203ENST00000522727 DMAC1Q96GE9 116 aa13.12□□□□□ -0.31
RAB11FIP1-203ENST00000522727 C4orf48Q5BLP8 95 aa13.1□□□□□ -0.31
RAB11FIP1-203ENST00000522727 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP1-203ENST00000522727 SPAG11AQ6PDA7 123 aa13.1□□□□□ -0.31
RAB11FIP1-203ENST00000522727 RPS29P62273 56 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP1-203ENST00000522727 EPPK1P58107 5090 aaKnown RBP13.08□□□□□ -0.32
RAB11FIP1-203ENST00000522727 TYMSOSQ8TAI1 123 aa13.07□□□□□ -0.32
RAB11FIP1-203ENST00000522727 VPS13BQ7Z7G8 4022 aa13.06□□□□□ -0.32
RAB11FIP1-203ENST00000522727 SMR3BP02814 79 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP1-203ENST00000522727 PRR26Q8N8Z3 221 aa13.01□□□□□ -0.33
RAB11FIP1-203ENST00000522727 A6NED7 52 aa13□□□□□ -0.33
RAB11FIP1-203ENST00000522727 CDC42SE1Q9NRR8 79 aa12.97□□□□□ -0.33
RAB11FIP1-203ENST00000522727 ATP11AUNQ6ZP68 121 aa12.95□□□□□ -0.34
RAB11FIP1-203ENST00000522727 LCA10Q71F78 164 aa12.95□□□□□ -0.34
RAB11FIP1-203ENST00000522727 HSPG2P98160 4391 aa12.92□□□□□ -0.34
RAB11FIP1-203ENST00000522727 LINC00304Q8N9R0 145 aa12.92□□□□□ -0.34
RAB11FIP1-203ENST00000522727 A8MU10 97 aa12.91□□□□□ -0.34
RAB11FIP1-203ENST00000522727 RETNLBQ9BQ08 111 aa12.91□□□□□ -0.34
RAB11FIP1-203ENST00000522727 FAT1Q14517 4588 aa12.9□□□□□ -0.35
RAB11FIP1-203ENST00000522727 RYR1P21817 5038 aa12.88□□□□□ -0.35
RAB11FIP1-203ENST00000522727 PMAIP1Q13794 54 aa12.85□□□□□ -0.35
RAB11FIP1-203ENST00000522727 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
RAB11FIP1-203ENST00000522727 IGKV2D-30A0A075B6S6 120 aa12.82□□□□□ -0.36
RAB11FIP1-203ENST00000522727 KRTAP10-4P60372 401 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP1-203ENST00000522727 SPINK7P58062 85 aa12.8□□□□□ -0.36
RAB11FIP1-203ENST00000522727 KRTAP17-1Q9BYP8 105 aa12.8□□□□□ -0.36
RAB11FIP1-203ENST00000522727 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
RAB11FIP1-203ENST00000522727 Q5VSD8 79 aa12.74□□□□□ -0.37
RAB11FIP1-203ENST00000522727 SPTSSBQ8NFR3 76 aa12.74□□□□□ -0.37
RAB11FIP1-203ENST00000522727 A0A1B0GU69 56 aa12.7□□□□□ -0.38
RAB11FIP1-203ENST00000522727 A6NN06 94 aa12.68□□□□□ -0.38
RAB11FIP1-203ENST00000522727 PKHD1L1Q86WI1 4243 aa12.68□□□□□ -0.38
RAB11FIP1-203ENST00000522727 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
RAB11FIP1-203ENST00000522727 C20orf166-AS1Q96NR2 134 aa12.68□□□□□ -0.38
RAB11FIP1-203ENST00000522727 A8MUU9 505 aa12.67□□□□□ -0.38
RAB11FIP1-203ENST00000522727 Q8N1X5 172 aa12.67□□□□□ -0.38
RAB11FIP1-203ENST00000522727 KTN1-AS1Q86SY8 53 aa12.62□□□□□ -0.39
RAB11FIP1-203ENST00000522727 SPATA8Q6RVD6 105 aa12.55□□□□□ -0.4
RAB11FIP1-203ENST00000522727 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
RAB11FIP1-203ENST00000522727 UQCR11O14957 56 aa12.51□□□□□ -0.41
RAB11FIP1-203ENST00000522727 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
RAB11FIP1-203ENST00000522727 HERC2O95714 4834 aa12.45□□□□□ -0.42
RAB11FIP1-203ENST00000522727 FLG2Q5D862 2391 aaPredicted RBP12.43□□□□□ -0.42
RAB11FIP1-203ENST00000522727 MIR22HGQ0VDD5 57 aa12.42□□□□□ -0.42
RAB11FIP1-203ENST00000522727 LRP1Q07954 4544 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP1-203ENST00000522727 SEC61GP60059 68 aa12.37□□□□□ -0.43
RAB11FIP1-203ENST00000522727 FAT3Q8TDW7 4589 aa12.37□□□□□ -0.43
RAB11FIP1-203ENST00000522727 MYCBP2O75592 4640 aa12.33□□□□□ -0.44
RAB11FIP1-203ENST00000522727 KRTAP3-1Q9BYR8 98 aa12.31□□□□□ -0.44
RAB11FIP1-203ENST00000522727 ABCA13Q86UQ4 5058 aa12.31□□□□□ -0.44
RAB11FIP1-203ENST00000522727 TNXBP22105 4242 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms