RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 HRES1P13985 223 aa10.39□□□□□ -0.75
SDCBP-209ENST00000522243 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
SDCBP-209ENST00000522243 C9JAW5 83 aa10.36□□□□□ -0.75
SDCBP-209ENST00000522243 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
SDCBP-209ENST00000522243 MPLKIPQ8TAP9 179 aa10.35□□□□□ -0.75
SDCBP-209ENST00000522243 NAA38Q9BRA0 125 aaKnown RBP10.34□□□□□ -0.75
SDCBP-209ENST00000522243 TSTD3H0UI37 97 aa10.33□□□□□ -0.76
SDCBP-209ENST00000522243 Q6ZQT0 140 aa10.31□□□□□ -0.76
SDCBP-209ENST00000522243 J3KT08 172 aa10.3□□□□□ -0.76
SDCBP-209ENST00000522243 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
SDCBP-209ENST00000522243 C21orf62-AS1Q17RA5 79 aa10.28□□□□□ -0.76
SDCBP-209ENST00000522243 ZCCHC13Q8WW36 166 aaKnown RBP10.28□□□□□ -0.76
SDCBP-209ENST00000522243 MT2AP02795 61 aa10.27□□□□□ -0.77
SDCBP-209ENST00000522243 M0R143 59 aa10.26□□□□□ -0.77
SDCBP-209ENST00000522243 NDUFB1O75438 58 aa10.25□□□□□ -0.77
SDCBP-209ENST00000522243 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
SDCBP-209ENST00000522243 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
SDCBP-209ENST00000522243 SPINK7P58062 85 aa10.22□□□□□ -0.77
SDCBP-209ENST00000522243 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
SDCBP-209ENST00000522243 MT1FP04733 61 aa10.2□□□□□ -0.78
SDCBP-209ENST00000522243 Q8N9P0 234 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-209ENST00000522243 C14orf132Q9NPU4 83 aa10.2□□□□□ -0.78
SDCBP-209ENST00000522243 C8orf17Q9NRJ1 99 aa10.2□□□□□ -0.78
SDCBP-209ENST00000522243 A8MWP4 228 aa10.19□□□□□ -0.78
SDCBP-209ENST00000522243 MTURNQ8N3F0 131 aa10.18□□□□□ -0.78
SDCBP-209ENST00000522243 IGKV3D-7A0A0C4DH55 119 aa10.17□□□□□ -0.78
SDCBP-209ENST00000522243 LYRM7Q5U5X0 104 aa10.16□□□□□ -0.78
SDCBP-209ENST00000522243 A0A1B0GW54 56 aa10.15□□□□□ -0.78
SDCBP-209ENST00000522243 PDE6GP18545 87 aa10.15□□□□□ -0.78
SDCBP-209ENST00000522243 KRTAP10-10P60014 251 aa10.15□□□□□ -0.78
SDCBP-209ENST00000522243 Q6ZVQ6 151 aa10.11□□□□□ -0.79
SDCBP-209ENST00000522243 LCE2BO14633 110 aa10.1□□□□□ -0.79
SDCBP-209ENST00000522243 BATFQ16520 125 aa10.1□□□□□ -0.79
SDCBP-209ENST00000522243 KRTAP9-3Q9BYQ3 159 aa10.1□□□□□ -0.79
SDCBP-209ENST00000522243 USH2AO75445 5202 aa10.09□□□□□ -0.79
SDCBP-209ENST00000522243 NREPQ16612 68 aa10.09□□□□□ -0.79
SDCBP-209ENST00000522243 WFDC13Q8IUB5 93 aa10.09□□□□□ -0.79
SDCBP-209ENST00000522243 PRR15Q8IV56 129 aa10.08□□□□□ -0.8
SDCBP-209ENST00000522243 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.05□□□□□ -0.8
SDCBP-209ENST00000522243 MMP24-AS1A0A0U1RRL7 71 aa10.03□□□□□ -0.8
SDCBP-209ENST00000522243 MRPL34Q9BQ48 92 aaKnown RBP10.02□□□□□ -0.81
SDCBP-209ENST00000522243 SSPOA2VEC9 5147 aa10.01□□□□□ -0.81
SDCBP-209ENST00000522243 TMEM254Q8TBM7 123 aa10.01□□□□□ -0.81
SDCBP-209ENST00000522243 KRTAP19-1Q8IUB9 90 aa9.99□□□□□ -0.81
SDCBP-209ENST00000522243 K7EQZ3 153 aa9.98□□□□□ -0.81
SDCBP-209ENST00000522243 C9orf118A6NHY6 69 aa9.97□□□□□ -0.81
SDCBP-209ENST00000522243 KRTAP9-7A8MTY7 169 aa9.97□□□□□ -0.81
SDCBP-209ENST00000522243 NDUFS5O43920 106 aa9.97□□□□□ -0.81
SDCBP-209ENST00000522243 hDV103S1A0JD37 113 aa9.96□□□□□ -0.82
SDCBP-209ENST00000522243 H3BT86 120 aa9.96□□□□□ -0.82
SDCBP-209ENST00000522243 TAX1BP3O14907 124 aa9.93□□□□□ -0.82
SDCBP-209ENST00000522243 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
SDCBP-209ENST00000522243 COL5A1-AS1Q5SY13 56 aa9.92□□□□□ -0.82
SDCBP-209ENST00000522243 BPY2O14599 106 aa9.9□□□□□ -0.82
SDCBP-209ENST00000522243 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
SDCBP-209ENST00000522243 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
SDCBP-209ENST00000522243 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
SDCBP-209ENST00000522243 Q5W150 140 aa9.85□□□□□ -0.83
SDCBP-209ENST00000522243 Q8N9L7 120 aa9.84□□□□□ -0.83
SDCBP-209ENST00000522243 FCGBPQ9Y6R7 5405 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-209ENST00000522243 CASC2Q6XLA1 102 aa9.79□□□□□ -0.84
SDCBP-209ENST00000522243 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
SDCBP-209ENST00000522243 SPCS1Q9Y6A9 102 aa9.79□□□□□ -0.84
SDCBP-209ENST00000522243 HCG22E2RYF7 251 aa9.78□□□□□ -0.84
SDCBP-209ENST00000522243 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-209ENST00000522243 KRTAP19-6Q3LI70 58 aa9.73□□□□□ -0.85
SDCBP-209ENST00000522243 LINC00846Q9NV44 126 aa9.72□□□□□ -0.85
SDCBP-209ENST00000522243 C4orf26Q17RF5 130 aa9.7□□□□□ -0.86
SDCBP-209ENST00000522243 A0A1B0GV90 55 aa9.68□□□□□ -0.86
SDCBP-209ENST00000522243 CXCL6P80162 114 aa9.66□□□□□ -0.86
SDCBP-209ENST00000522243 UBL5Q9BZL1 73 aa9.64□□□□□ -0.87
SDCBP-209ENST00000522243 PRO0461Q9UI25 63 aa9.64□□□□□ -0.87
SDCBP-209ENST00000522243 GTF2H5Q6ZYL4 71 aa9.63□□□□□ -0.87
SDCBP-209ENST00000522243 K7EP34 96 aa9.58□□□□□ -0.88
SDCBP-209ENST00000522243 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
SDCBP-209ENST00000522243 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
SDCBP-209ENST00000522243 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
SDCBP-209ENST00000522243 C1orf64Q8NEQ6 169 aa9.49□□□□□ -0.89
SDCBP-209ENST00000522243 S4R3F8 94 aa9.49□□□□□ -0.89
SDCBP-209ENST00000522243 FAM236AA0A1B0GUQ0 79 aa9.48□□□□□ -0.89
SDCBP-209ENST00000522243 FAM236BA0A1B0GV22 79 aa9.48□□□□□ -0.89
SDCBP-209ENST00000522243 F8W1H4 67 aa9.45□□□□□ -0.9
SDCBP-209ENST00000522243 SYNE2Q8WXH0 6885 aaKnown RBP9.43□□□□□ -0.9
SDCBP-209ENST00000522243 LCA10Q71F78 164 aa9.43□□□□□ -0.9
SDCBP-209ENST00000522243 TP53AIP1Q9HCN2 124 aa9.43□□□□□ -0.9
SDCBP-209ENST00000522243 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
SDCBP-209ENST00000522243 ETDBQ3ZM63 59 aa9.4□□□□□ -0.9
SDCBP-209ENST00000522243 MT1BP07438 61 aa9.33□□□□□ -0.92
SDCBP-209ENST00000522243 KRTAP6-3Q3LI67 103 aa9.33□□□□□ -0.92
SDCBP-209ENST00000522243 CYP4F30PQ9H0H9 118 aa9.31□□□□□ -0.92
SDCBP-209ENST00000522243 Q5VV11 94 aa9.29□□□□□ -0.92
SDCBP-209ENST00000522243 SPRR2GQ9BYE4 73 aa9.29□□□□□ -0.92
SDCBP-209ENST00000522243 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
SDCBP-209ENST00000522243 A6NN06 94 aa9.27□□□□□ -0.93
SDCBP-209ENST00000522243 J3QR89 54 aa9.26□□□□□ -0.93
SDCBP-209ENST00000522243 KRTAP19-8Q3LI54 63 aa9.26□□□□□ -0.93
SDCBP-209ENST00000522243 A0A087WVE0 104 aa9.25□□□□□ -0.93
SDCBP-209ENST00000522243 KLKP1Q107X0 134 aa9.24□□□□□ -0.93
SDCBP-209ENST00000522243 TRAV22A0A0B4J277 110 aa9.23□□□□□ -0.93
SDCBP-209ENST00000522243 K7ERU9 68 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms