RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 C8orf87E5RJ46 101 aa10.92□□□□□ -0.66
HOXA3-204ENST00000521401 Q6ZQT0 140 aa10.92□□□□□ -0.66
HOXA3-204ENST00000521401 C21orf62-AS1Q17RA5 79 aa10.89□□□□□ -0.67
HOXA3-204ENST00000521401 JMJD7-PLA2G4BH0Y9G9 81 aa10.88□□□□□ -0.67
HOXA3-204ENST00000521401 J3KT08 172 aa10.87□□□□□ -0.67
HOXA3-204ENST00000521401 LOC110117498A0A087WWA1 95 aa10.86□□□□□ -0.67
HOXA3-204ENST00000521401 HRES1P13985 223 aa10.86□□□□□ -0.67
HOXA3-204ENST00000521401 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
HOXA3-204ENST00000521401 KRTAP9-8Q9BYQ0 159 aa10.82□□□□□ -0.68
HOXA3-204ENST00000521401 A0A1B0GW54 56 aa10.81□□□□□ -0.68
HOXA3-204ENST00000521401 C14orf132Q9NPU4 83 aa10.8□□□□□ -0.68
HOXA3-204ENST00000521401 TSTD3H0UI37 97 aa10.79□□□□□ -0.68
HOXA3-204ENST00000521401 PDE6GP18545 87 aa10.79□□□□□ -0.68
HOXA3-204ENST00000521401 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
HOXA3-204ENST00000521401 BATFQ16520 125 aa10.77□□□□□ -0.69
HOXA3-204ENST00000521401 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
HOXA3-204ENST00000521401 ZCCHC13Q8WW36 166 aaKnown RBP10.77□□□□□ -0.69
HOXA3-204ENST00000521401 FAM236DA0A1B0GTK5 79 aa10.76□□□□□ -0.69
HOXA3-204ENST00000521401 A8MWP4 228 aa10.76□□□□□ -0.69
HOXA3-204ENST00000521401 NDUFB1O75438 58 aa10.76□□□□□ -0.69
HOXA3-204ENST00000521401 FAM236CP0DP71 79 aa10.76□□□□□ -0.69
HOXA3-204ENST00000521401 RBM12B-AS1Q9P1G2 102 aa10.75□□□□□ -0.69
HOXA3-204ENST00000521401 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
HOXA3-204ENST00000521401 LOC105371267A0A1B0GV96 52 aa10.74□□□□□ -0.69
HOXA3-204ENST00000521401 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
HOXA3-204ENST00000521401 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
HOXA3-204ENST00000521401 TAX1BP3O14907 124 aa10.69□□□□□ -0.7
HOXA3-204ENST00000521401 SPINK7P58062 85 aa10.68□□□□□ -0.7
HOXA3-204ENST00000521401 PRR15Q8IV56 129 aa10.67□□□□□ -0.7
HOXA3-204ENST00000521401 NREPQ16612 68 aa10.66□□□□□ -0.7
HOXA3-204ENST00000521401 A0A1W2PPM0 123 aa10.65□□□□□ -0.7
HOXA3-204ENST00000521401 H3BT86 120 aa10.65□□□□□ -0.7
HOXA3-204ENST00000521401 MT2AP02795 61 aa10.64□□□□□ -0.71
HOXA3-204ENST00000521401 Q6ZVQ6 151 aa10.64□□□□□ -0.71
HOXA3-204ENST00000521401 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
HOXA3-204ENST00000521401 USH2AO75445 5202 aa10.59□□□□□ -0.71
HOXA3-204ENST00000521401 MMP24-AS1A0A0U1RRL7 71 aa10.59□□□□□ -0.71
HOXA3-204ENST00000521401 MT1FP04733 61 aa10.56□□□□□ -0.72
HOXA3-204ENST00000521401 TMEM254Q8TBM7 123 aa10.56□□□□□ -0.72
HOXA3-204ENST00000521401 MRPL34Q9BQ48 92 aaKnown RBP10.56□□□□□ -0.72
HOXA3-204ENST00000521401 K7EQZ3 153 aa10.55□□□□□ -0.72
HOXA3-204ENST00000521401 SSPOA2VEC9 5147 aa10.53□□□□□ -0.72
HOXA3-204ENST00000521401 WFDC13Q8IUB5 93 aa10.52□□□□□ -0.73
HOXA3-204ENST00000521401 hDV103S1A0JD37 113 aa10.5□□□□□ -0.73
HOXA3-204ENST00000521401 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
HOXA3-204ENST00000521401 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
HOXA3-204ENST00000521401 BPY2O14599 106 aa10.47□□□□□ -0.73
HOXA3-204ENST00000521401 KRTAP9-3Q9BYQ3 159 aa10.47□□□□□ -0.73
HOXA3-204ENST00000521401 KRTAP10-10P60014 251 aa10.45□□□□□ -0.74
HOXA3-204ENST00000521401 LCE2BO14633 110 aa10.43□□□□□ -0.74
HOXA3-204ENST00000521401 NDUFS5O43920 106 aa10.41□□□□□ -0.74
HOXA3-204ENST00000521401 Q8N9L7 120 aa10.39□□□□□ -0.75
HOXA3-204ENST00000521401 PRO0461Q9UI25 63 aa10.39□□□□□ -0.75
HOXA3-204ENST00000521401 Q5W150 140 aa10.38□□□□□ -0.75
HOXA3-204ENST00000521401 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
HOXA3-204ENST00000521401 K7EP34 96 aa10.32□□□□□ -0.76
HOXA3-204ENST00000521401 CASC2Q6XLA1 102 aa10.32□□□□□ -0.76
HOXA3-204ENST00000521401 LINC00846Q9NV44 126 aa10.32□□□□□ -0.76
HOXA3-204ENST00000521401 IGKV2D-30A0A075B6S6 120 aa10.3□□□□□ -0.76
HOXA3-204ENST00000521401 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
HOXA3-204ENST00000521401 H1FX-AS1Q4G0G2 97 aa10.3□□□□□ -0.76
HOXA3-204ENST00000521401 HCG22E2RYF7 251 aa10.29□□□□□ -0.76
HOXA3-204ENST00000521401 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
HOXA3-204ENST00000521401 FCGBPQ9Y6R7 5405 aaPredicted RBP10.24□□□□□ -0.77
HOXA3-204ENST00000521401 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.24□□□□□ -0.77
HOXA3-204ENST00000521401 KRTAP19-1Q8IUB9 90 aa10.24□□□□□ -0.77
HOXA3-204ENST00000521401 UBL5Q9BZL1 73 aa10.24□□□□□ -0.77
HOXA3-204ENST00000521401 CXCL6P80162 114 aa10.2□□□□□ -0.78
HOXA3-204ENST00000521401 C4orf26Q17RF5 130 aa10.14□□□□□ -0.79
HOXA3-204ENST00000521401 GTF2H5Q6ZYL4 71 aa10.14□□□□□ -0.79
HOXA3-204ENST00000521401 F8W1H4 67 aa10.11□□□□□ -0.79
HOXA3-204ENST00000521401 KRTAP9-7A8MTY7 169 aa10.1□□□□□ -0.79
HOXA3-204ENST00000521401 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
HOXA3-204ENST00000521401 PCP4L1A6NKN8 68 aa10.07□□□□□ -0.8
HOXA3-204ENST00000521401 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
HOXA3-204ENST00000521401 KRTAP19-6Q3LI70 58 aa10.06□□□□□ -0.8
HOXA3-204ENST00000521401 TP53AIP1Q9HCN2 124 aa10□□□□□ -0.81
HOXA3-204ENST00000521401 MACF1Q9UPN3 7388 aaKnown RBP9.98□□□□□ -0.81
HOXA3-204ENST00000521401 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
HOXA3-204ENST00000521401 C5orf47Q569G3 176 aa9.94□□□□□ -0.82
HOXA3-204ENST00000521401 S4R3F8 94 aa9.9□□□□□ -0.82
HOXA3-204ENST00000521401 SYNE2Q8WXH0 6885 aaKnown RBP9.88□□□□□ -0.83
HOXA3-204ENST00000521401 LCA10Q71F78 164 aa9.87□□□□□ -0.83
HOXA3-204ENST00000521401 CYP4F30PQ9H0H9 118 aa9.85□□□□□ -0.83
HOXA3-204ENST00000521401 ACYP1P07311 99 aa9.84□□□□□ -0.83
HOXA3-204ENST00000521401 CSAG1Q6PB30 78 aa9.84□□□□□ -0.83
HOXA3-204ENST00000521401 FAM240AA0A1B0GVK7 77 aa9.8□□□□□ -0.84
HOXA3-204ENST00000521401 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
HOXA3-204ENST00000521401 FAM236AA0A1B0GUQ0 79 aa9.78□□□□□ -0.84
HOXA3-204ENST00000521401 FAM236BA0A1B0GV22 79 aa9.78□□□□□ -0.84
HOXA3-204ENST00000521401 TRAV22A0A0B4J277 110 aa9.77□□□□□ -0.85
HOXA3-204ENST00000521401 ATP5EP2Q5VTU8 51 aa9.75□□□□□ -0.85
HOXA3-204ENST00000521401 LOC101927531A0A1B0GV80 90 aa9.74□□□□□ -0.85
HOXA3-204ENST00000521401 A0A087WVE0 104 aa9.72□□□□□ -0.85
HOXA3-204ENST00000521401 HIST1H4AP62805 103 aaKnown RBP9.71□□□□□ -0.86
HOXA3-204ENST00000521401 SPRR2GQ9BYE4 73 aa9.71□□□□□ -0.86
HOXA3-204ENST00000521401 MT1BP07438 61 aa9.7□□□□□ -0.86
HOXA3-204ENST00000521401 UQCRQO14949 82 aa9.68□□□□□ -0.86
HOXA3-204ENST00000521401 KRTAP19-8Q3LI54 63 aa9.67□□□□□ -0.86
HOXA3-204ENST00000521401 KLKP1Q107X0 134 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms