RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 VWFP04275 2813 aa7.2□□□□□ -1.26
CPEB4-208ENST00000520867 J3QKU1 62 aa7.19□□□□□ -1.26
CPEB4-208ENST00000520867 CCDC168Q8NDH2 2452 aa7.19□□□□□ -1.26
CPEB4-208ENST00000520867 SPINK6Q6UWN8 80 aa7.18□□□□□ -1.26
CPEB4-208ENST00000520867 TYMSOSQ8TAI1 123 aa7.18□□□□□ -1.26
CPEB4-208ENST00000520867 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
CPEB4-208ENST00000520867 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
CPEB4-208ENST00000520867 POLQO75417 2590 aa7.18□□□□□ -1.26
CPEB4-208ENST00000520867 IGKV2D-30A0A075B6S6 120 aa7.16□□□□□ -1.26
CPEB4-208ENST00000520867 C10orf95Q9H7T3 257 aa7.16□□□□□ -1.26
CPEB4-208ENST00000520867 HIVEP1P15822 2718 aa7.16□□□□□ -1.26
CPEB4-208ENST00000520867 MEGF8Q7Z7M0 2845 aa7.14□□□□□ -1.27
CPEB4-208ENST00000520867 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
CPEB4-208ENST00000520867 H1FX-AS1Q4G0G2 97 aa7.14□□□□□ -1.27
CPEB4-208ENST00000520867 PDZD2O15018 2839 aa7.13□□□□□ -1.27
CPEB4-208ENST00000520867 KRTAP10-3P60369 221 aa7.12□□□□□ -1.27
CPEB4-208ENST00000520867 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
CPEB4-208ENST00000520867 DNAH1Q9P2D7 4330 aa7.1□□□□□ -1.27
CPEB4-208ENST00000520867 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
CPEB4-208ENST00000520867 C14orf177Q52M58 125 aa7.08□□□□□ -1.28
CPEB4-208ENST00000520867 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
CPEB4-208ENST00000520867 NBEAL1Q6ZS30 2694 aa7.07□□□□□ -1.28
CPEB4-208ENST00000520867 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
CPEB4-208ENST00000520867 Q8N1X5 172 aa7.03□□□□□ -1.28
CPEB4-208ENST00000520867 KRTAP10-9P60411 292 aa7.02□□□□□ -1.29
CPEB4-208ENST00000520867 KRTAP1-3Q8IUG1 177 aa7.01□□□□□ -1.29
CPEB4-208ENST00000520867 KRTAP21-3Q3LHN1 58 aa7□□□□□ -1.29
CPEB4-208ENST00000520867 FRAS1Q86XX4 4008 aa6.99□□□□□ -1.29
CPEB4-208ENST00000520867 ABCA12Q86UK0 2595 aa6.99□□□□□ -1.29
CPEB4-208ENST00000520867 FASNP49327 2511 aaKnown RBP6.97□□□□□ -1.29
CPEB4-208ENST00000520867 DNAH10Q8IVF4 4471 aa6.96□□□□□ -1.29
CPEB4-208ENST00000520867 LYSTQ99698 3801 aa6.96□□□□□ -1.3
CPEB4-208ENST00000520867 FLNCQ14315 2725 aa6.96□□□□□ -1.3
CPEB4-208ENST00000520867 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
CPEB4-208ENST00000520867 IGSF10Q6WRI0 2623 aa6.94□□□□□ -1.3
CPEB4-208ENST00000520867 ITPR3Q14573 2671 aa6.94□□□□□ -1.3
CPEB4-208ENST00000520867 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
CPEB4-208ENST00000520867 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
CPEB4-208ENST00000520867 KRTAP1-1Q07627 177 aa6.89□□□□□ -1.31
CPEB4-208ENST00000520867 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
CPEB4-208ENST00000520867 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
CPEB4-208ENST00000520867 MYO18BQ8IUG5 2567 aa6.86□□□□□ -1.31
CPEB4-208ENST00000520867 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
CPEB4-208ENST00000520867 MAST4O15021 2626 aa6.84□□□□□ -1.31
CPEB4-208ENST00000520867 TENM3Q9P273 2699 aa6.84□□□□□ -1.31
CPEB4-208ENST00000520867 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
CPEB4-208ENST00000520867 ANK2Q01484 3957 aa6.82□□□□□ -1.32
CPEB4-208ENST00000520867 TGP01266 2768 aa6.82□□□□□ -1.32
CPEB4-208ENST00000520867 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
CPEB4-208ENST00000520867 NOTCH2Q04721 2471 aa6.81□□□□□ -1.32
CPEB4-208ENST00000520867 FLNBO75369 2602 aaKnown RBP6.81□□□□□ -1.32
CPEB4-208ENST00000520867 DNAH8Q96JB1 4490 aa6.81□□□□□ -1.32
CPEB4-208ENST00000520867 ACANP16112 2415 aa6.81□□□□□ -1.32
CPEB4-208ENST00000520867 ATRQ13535 2644 aa6.8□□□□□ -1.32
CPEB4-208ENST00000520867 J3QL48 77 aa6.79□□□□□ -1.32
CPEB4-208ENST00000520867 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
CPEB4-208ENST00000520867 A0A0D9SG42 100 aa6.78□□□□□ -1.32
CPEB4-208ENST00000520867 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
CPEB4-208ENST00000520867 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
CPEB4-208ENST00000520867 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
CPEB4-208ENST00000520867 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
CPEB4-208ENST00000520867 KRTAP10-11P60412 298 aa6.75□□□□□ -1.33
CPEB4-208ENST00000520867 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
CPEB4-208ENST00000520867 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
CPEB4-208ENST00000520867 ITPR2Q14571 2701 aa6.7□□□□□ -1.34
CPEB4-208ENST00000520867 APLNQ9ULZ1 77 aa6.68□□□□□ -1.34
CPEB4-208ENST00000520867 XP32Q5T750 250 aa6.68□□□□□ -1.34
CPEB4-208ENST00000520867 UBE2DNLQ8IWF7 75 aa6.67□□□□□ -1.34
CPEB4-208ENST00000520867 KRTAP10-6P60371 365 aaPredicted RBP6.66□□□□□ -1.34
CPEB4-208ENST00000520867 S4R3F8 94 aa6.66□□□□□ -1.34
CPEB4-208ENST00000520867 COL6A5A8TX70 2615 aa6.65□□□□□ -1.34
CPEB4-208ENST00000520867 TENM1Q9UKZ4 2725 aa6.65□□□□□ -1.34
CPEB4-208ENST00000520867 VPS13DQ5THJ4 4388 aa6.65□□□□□ -1.35
CPEB4-208ENST00000520867 STAB2Q8WWQ8 2551 aa6.64□□□□□ -1.35
CPEB4-208ENST00000520867 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
CPEB4-208ENST00000520867 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CPEB4-208ENST00000520867 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
CPEB4-208ENST00000520867 SMR3AQ99954 134 aa6.6□□□□□ -1.35
CPEB4-208ENST00000520867 KMT2AQ03164 3969 aa6.56□□□□□ -1.36
CPEB4-208ENST00000520867 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
CPEB4-208ENST00000520867 Q6ZRN7 208 aaPredicted RBP6.56□□□□□ -1.36
CPEB4-208ENST00000520867 CMYA5Q8N3K9 4069 aa6.54□□□□□ -1.36
CPEB4-208ENST00000520867 FBN3Q75N90 2809 aa6.54□□□□□ -1.36
CPEB4-208ENST00000520867 NSD1Q96L73 2696 aaPredicted RBP6.51□□□□□ -1.37
CPEB4-208ENST00000520867 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
CPEB4-208ENST00000520867 DNAH3Q8TD57 4116 aa6.44□□□□□ -1.38
CPEB4-208ENST00000520867 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
CPEB4-208ENST00000520867 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
CPEB4-208ENST00000520867 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.39
CPEB4-208ENST00000520867 HUWE1Q7Z6Z7 4374 aaKnown RBP6.37□□□□□ -1.39
CPEB4-208ENST00000520867 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
CPEB4-208ENST00000520867 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
CPEB4-208ENST00000520867 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
CPEB4-208ENST00000520867 DNAH11Q96DT5 4516 aa6.3□□□□□ -1.4
CPEB4-208ENST00000520867 MGAM2Q2M2H8 2515 aa6.29□□□□□ -1.4
CPEB4-208ENST00000520867 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
CPEB4-208ENST00000520867 STAB1Q9NY15 2570 aa6.24□□□□□ -1.41
CPEB4-208ENST00000520867 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
CPEB4-208ENST00000520867 DNAH2Q9P225 4427 aa6.24□□□□□ -1.41
CPEB4-208ENST00000520867 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms