RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
CSMD1-208ENST00000520561 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
CSMD1-208ENST00000520561 PRR4Q16378 134 aa5.02□□□□□ -1.61
CSMD1-208ENST00000520561 PRR15Q8IV56 129 aa5.02□□□□□ -1.61
CSMD1-208ENST00000520561 Q8N9L7 120 aa5.02□□□□□ -1.61
CSMD1-208ENST00000520561 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-208ENST00000520561 C8orf87E5RJ46 101 aa5.01□□□□□ -1.61
CSMD1-208ENST00000520561 PCLOQ9Y6V0 5065 aa5.01□□□□□ -1.61
CSMD1-208ENST00000520561 IGLV7-46A0A075B6I9 117 aa5□□□□□ -1.61
CSMD1-208ENST00000520561 IMUPQ9GZP8 106 aa5□□□□□ -1.61
CSMD1-208ENST00000520561 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
CSMD1-208ENST00000520561 A0A087WVE0 104 aa4.97□□□□□ -1.61
CSMD1-208ENST00000520561 MMP24-AS1A0A0U1RRL7 71 aa4.97□□□□□ -1.61
CSMD1-208ENST00000520561 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
CSMD1-208ENST00000520561 LINC00313P59037 77 aa4.97□□□□□ -1.61
CSMD1-208ENST00000520561 C9orf92A6NGG3 77 aa4.96□□□□□ -1.62
CSMD1-208ENST00000520561 WFDC13Q8IUB5 93 aa4.96□□□□□ -1.62
CSMD1-208ENST00000520561 hDV103S1A0JD37 113 aa4.95□□□□□ -1.62
CSMD1-208ENST00000520561 CASC2Q6XLA1 102 aa4.95□□□□□ -1.62
CSMD1-208ENST00000520561 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
CSMD1-208ENST00000520561 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
CSMD1-208ENST00000520561 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
CSMD1-208ENST00000520561 TMEM254Q8TBM7 123 aa4.94□□□□□ -1.62
CSMD1-208ENST00000520561 FAM236AA0A1B0GUQ0 79 aa4.92□□□□□ -1.62
CSMD1-208ENST00000520561 FAM236BA0A1B0GV22 79 aa4.92□□□□□ -1.62
CSMD1-208ENST00000520561 MRPL34Q9BQ48 92 aaKnown RBP4.92□□□□□ -1.62
CSMD1-208ENST00000520561 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
CSMD1-208ENST00000520561 NDUFS5O43920 106 aa4.9□□□□□ -1.63
CSMD1-208ENST00000520561 SCGB1A1P11684 91 aa4.9□□□□□ -1.63
CSMD1-208ENST00000520561 XP32Q5T750 250 aa4.88□□□□□ -1.63
CSMD1-208ENST00000520561 ATOX1O00244 68 aa4.87□□□□□ -1.63
CSMD1-208ENST00000520561 Q75L30 129 aa4.87□□□□□ -1.63
CSMD1-208ENST00000520561 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
CSMD1-208ENST00000520561 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
CSMD1-208ENST00000520561 A8MUU9 505 aa4.86□□□□□ -1.63
CSMD1-208ENST00000520561 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
CSMD1-208ENST00000520561 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CSMD1-208ENST00000520561 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.63
CSMD1-208ENST00000520561 UQCRQO14949 82 aa4.82□□□□□ -1.64
CSMD1-208ENST00000520561 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
CSMD1-208ENST00000520561 ZCCHC13Q8WW36 166 aaKnown RBP4.81□□□□□ -1.64
CSMD1-208ENST00000520561 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
CSMD1-208ENST00000520561 TRAV7A0A075B6U4 112 aa4.8□□□□□ -1.64
CSMD1-208ENST00000520561 TRAV22A0A0B4J277 110 aa4.8□□□□□ -1.64
CSMD1-208ENST00000520561 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
CSMD1-208ENST00000520561 HERC1Q15751 4861 aa4.78□□□□□ -1.64
CSMD1-208ENST00000520561 SERP2Q8N6R1 65 aa4.78□□□□□ -1.64
CSMD1-208ENST00000520561 ANAPC13Q9BS18 74 aa4.78□□□□□ -1.64
CSMD1-208ENST00000520561 LPAP08519 4548 aa4.77□□□□□ -1.65
CSMD1-208ENST00000520561 H0Y9P7 68 aa4.77□□□□□ -1.65
CSMD1-208ENST00000520561 MP68P56378 58 aa4.77□□□□□ -1.65
CSMD1-208ENST00000520561 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
CSMD1-208ENST00000520561 C5orf47Q569G3 176 aa4.76□□□□□ -1.65
CSMD1-208ENST00000520561 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
CSMD1-208ENST00000520561 Q5W150 140 aa4.76□□□□□ -1.65
CSMD1-208ENST00000520561 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
CSMD1-208ENST00000520561 H3BPC8 53 aa4.74□□□□□ -1.65
CSMD1-208ENST00000520561 COX7CP15954 63 aa4.73□□□□□ -1.65
CSMD1-208ENST00000520561 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
CSMD1-208ENST00000520561 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
CSMD1-208ENST00000520561 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
CSMD1-208ENST00000520561 LINC00208Q96KT6 92 aa4.72□□□□□ -1.65
CSMD1-208ENST00000520561 LRP2P98164 4655 aa4.71□□□□□ -1.66
CSMD1-208ENST00000520561 C1orf64Q8NEQ6 169 aa4.71□□□□□ -1.66
CSMD1-208ENST00000520561 MUC17Q685J3 4493 aa4.71□□□□□ -1.66
CSMD1-208ENST00000520561 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
CSMD1-208ENST00000520561 SPINK7P58062 85 aa4.69□□□□□ -1.66
CSMD1-208ENST00000520561 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
CSMD1-208ENST00000520561 CYP4F30PQ9H0H9 118 aa4.67□□□□□ -1.66
CSMD1-208ENST00000520561 SNURFQ9Y675 71 aa4.67□□□□□ -1.66
CSMD1-208ENST00000520561 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
CSMD1-208ENST00000520561 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
CSMD1-208ENST00000520561 NDUFC1O43677 76 aa4.62□□□□□ -1.67
CSMD1-208ENST00000520561 PCP4P48539 62 aa4.62□□□□□ -1.67
CSMD1-208ENST00000520561 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
CSMD1-208ENST00000520561 HRES1P13985 223 aa4.61□□□□□ -1.67
CSMD1-208ENST00000520561 RBM12B-AS1Q9P1G2 102 aa4.6□□□□□ -1.67
CSMD1-208ENST00000520561 FAM236DA0A1B0GTK5 79 aa4.58□□□□□ -1.68
CSMD1-208ENST00000520561 FAM236CP0DP71 79 aa4.58□□□□□ -1.68
CSMD1-208ENST00000520561 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
CSMD1-208ENST00000520561 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
CSMD1-208ENST00000520561 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
CSMD1-208ENST00000520561 H7BZZ5 65 aa4.56□□□□□ -1.68
CSMD1-208ENST00000520561 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
CSMD1-208ENST00000520561 SPANXA2-OT1Q8N9U9 137 aa4.56□□□□□ -1.68
CSMD1-208ENST00000520561 MPLKIPQ8TAP9 179 aa4.55□□□□□ -1.68
CSMD1-208ENST00000520561 A8MUN3 132 aa4.53□□□□□ -1.68
CSMD1-208ENST00000520561 TMEM258P61165 79 aa4.52□□□□□ -1.69
CSMD1-208ENST00000520561 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
CSMD1-208ENST00000520561 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
CSMD1-208ENST00000520561 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
CSMD1-208ENST00000520561 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
CSMD1-208ENST00000520561 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
CSMD1-208ENST00000520561 ACYP2P14621 99 aa4.47□□□□□ -1.69
CSMD1-208ENST00000520561 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.7
CSMD1-208ENST00000520561 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
CSMD1-208ENST00000520561 MUC2Q02817 5179 aa4.45□□□□□ -1.7
CSMD1-208ENST00000520561 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
CSMD1-208ENST00000520561 S4R3F8 94 aa4.44□□□□□ -1.7
CSMD1-208ENST00000520561 COA5Q86WW8 74 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms