RNA–Protein interactions for RNA: ENST00000519975.1

PCMTD1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-204ENST00000519975 TMEM167AQ8TBQ9 72 aa0.78□□□□□ -2.28
PCMTD1-204ENST00000519975 WNK1Q9H4A3 2382 aa0.77□□□□□ -2.29
PCMTD1-204ENST00000519975 DEFB110Q30KQ9 67 aa0.77□□□□□ -2.29
PCMTD1-204ENST00000519975 CHD8Q9HCK8 2581 aa0.77□□□□□ -2.29
PCMTD1-204ENST00000519975 SRRM2Q9UQ35 2752 aaKnown RBP0.76□□□□□ -2.29
PCMTD1-204ENST00000519975 SPART-AS1P0CW21 52 aa0.76□□□□□ -2.29
PCMTD1-204ENST00000519975 COL6A5A8TX70 2615 aa0.76□□□□□ -2.29
PCMTD1-204ENST00000519975 NBASA2RRP1 2371 aa0.75□□□□□ -2.29
PCMTD1-204ENST00000519975 UBR5O95071 2799 aaPredicted RBP0.74□□□□□ -2.29
PCMTD1-204ENST00000519975 NAV2Q8IVL1 2488 aa0.74□□□□□ -2.29
PCMTD1-204ENST00000519975 HIVEP3Q5T1R4 2406 aa0.74□□□□□ -2.29
PCMTD1-204ENST00000519975 SPRR2DP22532 72 aa0.72□□□□□ -2.29
PCMTD1-204ENST00000519975 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
PCMTD1-204ENST00000519975 PTPN13Q12923 2485 aa0.72□□□□□ -2.29
PCMTD1-204ENST00000519975 MAP1BP46821 2468 aaKnown RBP0.71□□□□□ -2.3
PCMTD1-204ENST00000519975 ACANP16112 2415 aa0.7□□□□□ -2.3
PCMTD1-204ENST00000519975 FAT2Q9NYQ8 4349 aa0.7□□□□□ -2.3
PCMTD1-204ENST00000519975 DMBT1Q9UGM3 2413 aaPredicted RBP0.69□□□□□ -2.3
PCMTD1-204ENST00000519975 PRKDCP78527 4128 aaKnown RBP0.69□□□□□ -2.3
PCMTD1-204ENST00000519975 BSNQ9UPA5 3926 aa0.69□□□□□ -2.3
PCMTD1-204ENST00000519975 RPL39P5Q59GN2 51 aa0.69□□□□□ -2.3
PCMTD1-204ENST00000519975 CHD7Q9P2D1 2997 aa0.69□□□□□ -2.3
PCMTD1-204ENST00000519975 UNC79Q9P2D8 2635 aa0.68□□□□□ -2.3
PCMTD1-204ENST00000519975 PKD1L1Q8TDX9 2849 aa0.68□□□□□ -2.3
PCMTD1-204ENST00000519975 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
PCMTD1-204ENST00000519975 SPRR2BP35325 72 aa0.68□□□□□ -2.3
PCMTD1-204ENST00000519975 PDZD2O15018 2839 aa0.68□□□□□ -2.3
PCMTD1-204ENST00000519975 ZFYVE26Q68DK2 2539 aa0.68□□□□□ -2.3
PCMTD1-204ENST00000519975 CCDC168Q8NDH2 2452 aa0.67□□□□□ -2.3
PCMTD1-204ENST00000519975 ACACAQ13085 2346 aa0.67□□□□□ -2.3
PCMTD1-204ENST00000519975 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
PCMTD1-204ENST00000519975 APC2O95996 2303 aa0.67□□□□□ -2.3
PCMTD1-204ENST00000519975 SETD2Q9BYW2 2564 aaPredicted RBP0.67□□□□□ -2.3
PCMTD1-204ENST00000519975 TENM2Q9NT68 2774 aa0.66□□□□□ -2.3
PCMTD1-204ENST00000519975 GCN1Q92616 2671 aaKnown RBP0.66□□□□□ -2.3
PCMTD1-204ENST00000519975 LYSTQ99698 3801 aa0.65□□□□□ -2.31
PCMTD1-204ENST00000519975 RHPN1-AS1Q9BWJ2 59 aa0.65□□□□□ -2.31
PCMTD1-204ENST00000519975 SPTBN4Q9H254 2564 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 STAB1Q9NY15 2570 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 MTORP42345 2549 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 NF1P21359 2839 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 DEFB108AA8MXU0 73 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 KRTAP8-1Q8IUC2 63 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 USP24Q9UPU5 2620 aa0.64□□□□□ -2.31
PCMTD1-204ENST00000519975 H3BUX3 64 aa0.63□□□□□ -2.31
PCMTD1-204ENST00000519975 HUWE1Q7Z6Z7 4374 aaKnown RBP0.63□□□□□ -2.31
PCMTD1-204ENST00000519975 FLNCQ14315 2725 aa0.62□□□□□ -2.31
PCMTD1-204ENST00000519975 SETXQ7Z333 2677 aaKnown RBP0.62□□□□□ -2.31
PCMTD1-204ENST00000519975 VPS13BQ7Z7G8 4022 aa0.6□□□□□ -2.31
PCMTD1-204ENST00000519975 SPRR2AP35326 72 aa0.6□□□□□ -2.31
PCMTD1-204ENST00000519975 KMT2AQ03164 3969 aa0.6□□□□□ -2.31
PCMTD1-204ENST00000519975 SACSQ9NZJ4 4579 aa0.6□□□□□ -2.31
PCMTD1-204ENST00000519975 MT1AP04731 61 aa0.59□□□□□ -2.31
PCMTD1-204ENST00000519975 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.32
PCMTD1-204ENST00000519975 RIF1Q5UIP0 2472 aaKnown RBP0.59□□□□□ -2.32
PCMTD1-204ENST00000519975 ZZEF1O43149 2961 aa0.59□□□□□ -2.32
PCMTD1-204ENST00000519975 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 NSD1Q96L73 2696 aaPredicted RBP0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 A0A096LNI7 61 aa0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 MYCBP2O75592 4640 aa0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 TACC2O95359 2948 aa0.58□□□□□ -2.32
PCMTD1-204ENST00000519975 FAM186AA6NE01 2351 aa0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 CRYBG3Q68DQ2 2970 aa0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 DNAH11Q96DT5 4516 aa0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 ACACBO00763 2458 aa0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 NCOR2Q9Y618 2525 aa0.57□□□□□ -2.32
PCMTD1-204ENST00000519975 PKD1P98161 4303 aa0.56□□□□□ -2.32
PCMTD1-204ENST00000519975 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
PCMTD1-204ENST00000519975 LRRK2Q5S007 2527 aa0.56□□□□□ -2.32
PCMTD1-204ENST00000519975 ANKHD1Q8IWZ3 2542 aaKnown RBP0.56□□□□□ -2.32
PCMTD1-204ENST00000519975 EPG5Q9HCE0 2579 aa0.55□□□□□ -2.32
PCMTD1-204ENST00000519975 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
PCMTD1-204ENST00000519975 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
PCMTD1-204ENST00000519975 COL7A1Q02388 2944 aa0.54□□□□□ -2.32
PCMTD1-204ENST00000519975 COL12A1Q99715 3063 aa0.54□□□□□ -2.32
PCMTD1-204ENST00000519975 ANKRD11Q6UB99 2663 aaPredicted RBP0.54□□□□□ -2.32
PCMTD1-204ENST00000519975 VPS13DQ5THJ4 4388 aa0.54□□□□□ -2.32
PCMTD1-204ENST00000519975 USP9YO00507 2555 aaPredicted RBP0.53□□□□□ -2.32
PCMTD1-204ENST00000519975 LPAP08519 4548 aa0.53□□□□□ -2.32
PCMTD1-204ENST00000519975 CACNA1AO00555 2505 aa0.53□□□□□ -2.32
PCMTD1-204ENST00000519975 SMR3BP02814 79 aaPredicted RBP0.53□□□□□ -2.32
PCMTD1-204ENST00000519975 DEFB124Q8NES8 71 aa0.53□□□□□ -2.32
PCMTD1-204ENST00000519975 APELAP0DMC3 54 aa0.52□□□□□ -2.33
PCMTD1-204ENST00000519975 SPRR2EP22531 72 aa0.52□□□□□ -2.33
PCMTD1-204ENST00000519975 ITPR3Q14573 2671 aa0.52□□□□□ -2.33
PCMTD1-204ENST00000519975 NBEAL2Q6ZNJ1 2754 aa0.52□□□□□ -2.33
PCMTD1-204ENST00000519975 SPG11Q96JI7 2443 aa0.52□□□□□ -2.33
PCMTD1-204ENST00000519975 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 UTP20O75691 2785 aaKnown RBP0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 RANBP2P49792 3224 aaKnown RBP0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 DEFB136Q30KP8 78 aa0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 KRTAP19-5Q3LI72 72 aa0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 DNAH3Q8TD57 4116 aa0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 ZANQ9Y493 2812 aa0.51□□□□□ -2.33
PCMTD1-204ENST00000519975 PKHD1L1Q86WI1 4243 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms