RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 Q6ZQT0 140 aa6.19□□□□□ -1.42
MRPS28-202ENST00000518271 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
MRPS28-202ENST00000518271 C9JAW5 83 aa6.18□□□□□ -1.42
MRPS28-202ENST00000518271 HRES1P13985 223 aa6.17□□□□□ -1.42
MRPS28-202ENST00000518271 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
MRPS28-202ENST00000518271 C8orf87E5RJ46 101 aa6.16□□□□□ -1.42
MRPS28-202ENST00000518271 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
MRPS28-202ENST00000518271 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
MRPS28-202ENST00000518271 TRBV20-1A0A075B6N2 111 aa6.13□□□□□ -1.43
MRPS28-202ENST00000518271 LOC105371267A0A1B0GV96 52 aa6.13□□□□□ -1.43
MRPS28-202ENST00000518271 J3KT08 172 aa6.13□□□□□ -1.43
MRPS28-202ENST00000518271 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
MRPS28-202ENST00000518271 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
MRPS28-202ENST00000518271 TSTD3H0UI37 97 aa6.12□□□□□ -1.43
MRPS28-202ENST00000518271 USH2AO75445 5202 aa6.11□□□□□ -1.43
MRPS28-202ENST00000518271 BATFQ16520 125 aa6.11□□□□□ -1.43
MRPS28-202ENST00000518271 A0A1B0GW54 56 aa6.1□□□□□ -1.43
MRPS28-202ENST00000518271 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
MRPS28-202ENST00000518271 ZCCHC13Q8WW36 166 aaKnown RBP6.1□□□□□ -1.43
MRPS28-202ENST00000518271 IGKV3D-7A0A0C4DH55 119 aa6.09□□□□□ -1.43
MRPS28-202ENST00000518271 A8MWP4 228 aa6.09□□□□□ -1.43
MRPS28-202ENST00000518271 TAX1BP3O14907 124 aa6.09□□□□□ -1.43
MRPS28-202ENST00000518271 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
MRPS28-202ENST00000518271 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
MRPS28-202ENST00000518271 PDE6GP18545 87 aa6.08□□□□□ -1.44
MRPS28-202ENST00000518271 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
MRPS28-202ENST00000518271 C9orf118A6NHY6 69 aa6.07□□□□□ -1.44
MRPS28-202ENST00000518271 MTURNQ8N3F0 131 aa6.06□□□□□ -1.44
MRPS28-202ENST00000518271 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
MRPS28-202ENST00000518271 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
MRPS28-202ENST00000518271 NDUFB1O75438 58 aa6.05□□□□□ -1.44
MRPS28-202ENST00000518271 MT2AP02795 61 aa6.05□□□□□ -1.44
MRPS28-202ENST00000518271 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
MRPS28-202ENST00000518271 H3BT86 120 aa6.04□□□□□ -1.44
MRPS28-202ENST00000518271 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
MRPS28-202ENST00000518271 MMP24-AS1A0A0U1RRL7 71 aa6.03□□□□□ -1.44
MRPS28-202ENST00000518271 SPINK7P58062 85 aa6.03□□□□□ -1.44
MRPS28-202ENST00000518271 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
MRPS28-202ENST00000518271 Q6ZVQ6 151 aa6.02□□□□□ -1.45
MRPS28-202ENST00000518271 MT1FP04733 61 aa6.01□□□□□ -1.45
MRPS28-202ENST00000518271 NREPQ16612 68 aa6.01□□□□□ -1.45
MRPS28-202ENST00000518271 K7EQZ3 153 aa5.99□□□□□ -1.45
MRPS28-202ENST00000518271 SMCPP49901 116 aaPredicted RBP5.98□□□□□ -1.45
MRPS28-202ENST00000518271 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
MRPS28-202ENST00000518271 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
MRPS28-202ENST00000518271 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
MRPS28-202ENST00000518271 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
MRPS28-202ENST00000518271 SPCS1Q9Y6A9 102 aa5.95□□□□□ -1.46
MRPS28-202ENST00000518271 hDV103S1A0JD37 113 aa5.93□□□□□ -1.46
MRPS28-202ENST00000518271 LCE2BO14633 110 aa5.93□□□□□ -1.46
MRPS28-202ENST00000518271 PRO0461Q9UI25 63 aa5.93□□□□□ -1.46
MRPS28-202ENST00000518271 BPY2O14599 106 aa5.91□□□□□ -1.46
MRPS28-202ENST00000518271 Q8N9L7 120 aa5.91□□□□□ -1.46
MRPS28-202ENST00000518271 Q5W150 140 aa5.9□□□□□ -1.46
MRPS28-202ENST00000518271 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
MRPS28-202ENST00000518271 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
MRPS28-202ENST00000518271 COL5A1-AS1Q5SY13 56 aa5.88□□□□□ -1.47
MRPS28-202ENST00000518271 K7EP34 96 aa5.87□□□□□ -1.47
MRPS28-202ENST00000518271 NDUFS5O43920 106 aa5.86□□□□□ -1.47
MRPS28-202ENST00000518271 LINC00846Q9NV44 126 aa5.85□□□□□ -1.47
MRPS28-202ENST00000518271 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
MRPS28-202ENST00000518271 IGKV2D-30A0A075B6S6 120 aa5.82□□□□□ -1.48
MRPS28-202ENST00000518271 HCG22E2RYF7 251 aa5.82□□□□□ -1.48
MRPS28-202ENST00000518271 IGKV2-30P06310 120 aa5.82□□□□□ -1.48
MRPS28-202ENST00000518271 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
MRPS28-202ENST00000518271 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
MRPS28-202ENST00000518271 C7orf65Q6ZTY9 151 aa5.81□□□□□ -1.48
MRPS28-202ENST00000518271 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
MRPS28-202ENST00000518271 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
MRPS28-202ENST00000518271 CXCL6P80162 114 aa5.76□□□□□ -1.49
MRPS28-202ENST00000518271 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
MRPS28-202ENST00000518271 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
MRPS28-202ENST00000518271 GTF2H5Q6ZYL4 71 aa5.73□□□□□ -1.49
MRPS28-202ENST00000518271 PCP4L1A6NKN8 68 aa5.72□□□□□ -1.49
MRPS28-202ENST00000518271 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
MRPS28-202ENST00000518271 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
MRPS28-202ENST00000518271 F8W1H4 67 aa5.71□□□□□ -1.5
MRPS28-202ENST00000518271 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
MRPS28-202ENST00000518271 TP53AIP1Q9HCN2 124 aa5.64□□□□□ -1.51
MRPS28-202ENST00000518271 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
MRPS28-202ENST00000518271 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
MRPS28-202ENST00000518271 C1orf64Q8NEQ6 169 aa5.61□□□□□ -1.51
MRPS28-202ENST00000518271 LCA10Q71F78 164 aa5.6□□□□□ -1.51
MRPS28-202ENST00000518271 S4R3F8 94 aa5.6□□□□□ -1.51
MRPS28-202ENST00000518271 FAM240AA0A1B0GVK7 77 aa5.58□□□□□ -1.52
MRPS28-202ENST00000518271 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
MRPS28-202ENST00000518271 CYP4F30PQ9H0H9 118 aa5.57□□□□□ -1.52
MRPS28-202ENST00000518271 ACYP1P07311 99 aa5.55□□□□□ -1.52
MRPS28-202ENST00000518271 A0A087WVE0 104 aa5.54□□□□□ -1.52
MRPS28-202ENST00000518271 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
MRPS28-202ENST00000518271 MT1BP07438 61 aa5.53□□□□□ -1.52
MRPS28-202ENST00000518271 ATP5EP2Q5VTU8 51 aa5.53□□□□□ -1.52
MRPS28-202ENST00000518271 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
MRPS28-202ENST00000518271 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
MRPS28-202ENST00000518271 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
MRPS28-202ENST00000518271 FAM236AA0A1B0GUQ0 79 aa5.5□□□□□ -1.53
MRPS28-202ENST00000518271 FAM236BA0A1B0GV22 79 aa5.5□□□□□ -1.53
MRPS28-202ENST00000518271 LOC101927531A0A1B0GV80 90 aa5.5□□□□□ -1.53
MRPS28-202ENST00000518271 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
MRPS28-202ENST00000518271 HIST1H4AP62805 103 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms