RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
SPIDR-204ENST00000517824 MP68P56378 58 aa6.45□□□□□ -1.38
SPIDR-204ENST00000517824 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
SPIDR-204ENST00000517824 ANAPC11Q9NYG5 84 aa6.45□□□□□ -1.38
SPIDR-204ENST00000517824 CD164Q04900 197 aa6.44□□□□□ -1.38
SPIDR-204ENST00000517824 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
SPIDR-204ENST00000517824 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
SPIDR-204ENST00000517824 FAM229BQ4G0N7 80 aa6.43□□□□□ -1.38
SPIDR-204ENST00000517824 C5orf47Q569G3 176 aa6.43□□□□□ -1.38
SPIDR-204ENST00000517824 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
SPIDR-204ENST00000517824 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
SPIDR-204ENST00000517824 IGHV6-1A0A0B4J1U7 121 aa6.4□□□□□ -1.38
SPIDR-204ENST00000517824 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
SPIDR-204ENST00000517824 hDV103S1A0JD37 113 aa6.4□□□□□ -1.38
SPIDR-204ENST00000517824 H7BZZ5 65 aa6.4□□□□□ -1.38
SPIDR-204ENST00000517824 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.38
SPIDR-204ENST00000517824 LIMD2Q9BT23 127 aa6.39□□□□□ -1.39
SPIDR-204ENST00000517824 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-204ENST00000517824 MMP24-AS1A0A0U1RRL7 71 aa6.38□□□□□ -1.39
SPIDR-204ENST00000517824 NDUFS5O43920 106 aa6.38□□□□□ -1.39
SPIDR-204ENST00000517824 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
SPIDR-204ENST00000517824 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
SPIDR-204ENST00000517824 KRTAP29-1A8MX34 341 aaPredicted RBP6.37□□□□□ -1.39
SPIDR-204ENST00000517824 H0Y9P7 68 aa6.37□□□□□ -1.39
SPIDR-204ENST00000517824 H3BPC8 53 aa6.37□□□□□ -1.39
SPIDR-204ENST00000517824 H3BS24 57 aa6.37□□□□□ -1.39
SPIDR-204ENST00000517824 Q96NJ1 140 aa6.37□□□□□ -1.39
SPIDR-204ENST00000517824 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
SPIDR-204ENST00000517824 TP53AIP1Q9HCN2 124 aa6.36□□□□□ -1.39
SPIDR-204ENST00000517824 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
SPIDR-204ENST00000517824 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
SPIDR-204ENST00000517824 Q8N1X5 172 aa6.35□□□□□ -1.39
SPIDR-204ENST00000517824 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
SPIDR-204ENST00000517824 C8orf87E5RJ46 101 aa6.34□□□□□ -1.39
SPIDR-204ENST00000517824 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
SPIDR-204ENST00000517824 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
SPIDR-204ENST00000517824 LINC00208Q96KT6 92 aa6.33□□□□□ -1.4
SPIDR-204ENST00000517824 A0A087X002 238 aa6.32□□□□□ -1.4
SPIDR-204ENST00000517824 MRPL34Q9BQ48 92 aaKnown RBP6.32□□□□□ -1.4
SPIDR-204ENST00000517824 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
SPIDR-204ENST00000517824 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
SPIDR-204ENST00000517824 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
SPIDR-204ENST00000517824 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
SPIDR-204ENST00000517824 FLG2Q5D862 2391 aaPredicted RBP6.27□□□□□ -1.41
SPIDR-204ENST00000517824 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
SPIDR-204ENST00000517824 Q5XG85 94 aa6.26□□□□□ -1.41
SPIDR-204ENST00000517824 SPINK1P00995 79 aa6.25□□□□□ -1.41
SPIDR-204ENST00000517824 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
SPIDR-204ENST00000517824 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
SPIDR-204ENST00000517824 LINC00313P59037 77 aa6.24□□□□□ -1.41
SPIDR-204ENST00000517824 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
SPIDR-204ENST00000517824 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
SPIDR-204ENST00000517824 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
SPIDR-204ENST00000517824 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
SPIDR-204ENST00000517824 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
SPIDR-204ENST00000517824 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
SPIDR-204ENST00000517824 XP32Q5T750 250 aa6.21□□□□□ -1.42
SPIDR-204ENST00000517824 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
SPIDR-204ENST00000517824 PRR4Q16378 134 aa6.2□□□□□ -1.42
SPIDR-204ENST00000517824 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
SPIDR-204ENST00000517824 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
SPIDR-204ENST00000517824 OXTP01178 125 aa6.19□□□□□ -1.42
SPIDR-204ENST00000517824 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
SPIDR-204ENST00000517824 Q5VSD8 79 aa6.19□□□□□ -1.42
SPIDR-204ENST00000517824 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
SPIDR-204ENST00000517824 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
SPIDR-204ENST00000517824 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
SPIDR-204ENST00000517824 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
SPIDR-204ENST00000517824 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
SPIDR-204ENST00000517824 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
SPIDR-204ENST00000517824 RETNLBQ9BQ08 111 aa6.1□□□□□ -1.43
SPIDR-204ENST00000517824 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
SPIDR-204ENST00000517824 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
SPIDR-204ENST00000517824 V9GYY9 64 aa6.08□□□□□ -1.44
SPIDR-204ENST00000517824 Q5W150 140 aa6.07□□□□□ -1.44
SPIDR-204ENST00000517824 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
SPIDR-204ENST00000517824 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
SPIDR-204ENST00000517824 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
SPIDR-204ENST00000517824 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
SPIDR-204ENST00000517824 COA5Q86WW8 74 aa6.05□□□□□ -1.44
SPIDR-204ENST00000517824 KRTAP13-3Q3SY46 172 aa6.04□□□□□ -1.44
SPIDR-204ENST00000517824 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
SPIDR-204ENST00000517824 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
SPIDR-204ENST00000517824 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
SPIDR-204ENST00000517824 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
SPIDR-204ENST00000517824 C9orf92A6NGG3 77 aa6□□□□□ -1.45
SPIDR-204ENST00000517824 ACYP2P14621 99 aa6□□□□□ -1.45
SPIDR-204ENST00000517824 LRP2P98164 4655 aa6□□□□□ -1.45
SPIDR-204ENST00000517824 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
SPIDR-204ENST00000517824 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
SPIDR-204ENST00000517824 TNXBP22105 4242 aa6□□□□□ -1.45
SPIDR-204ENST00000517824 HRES1P13985 223 aa5.99□□□□□ -1.45
SPIDR-204ENST00000517824 Q1T7F1 81 aa5.99□□□□□ -1.45
SPIDR-204ENST00000517824 DMAC1Q96GE9 116 aa5.95□□□□□ -1.46
SPIDR-204ENST00000517824 PSPHP1O15172 72 aa5.93□□□□□ -1.46
SPIDR-204ENST00000517824 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
SPIDR-204ENST00000517824 RNF213Q63HN8 5207 aa5.93□□□□□ -1.46
SPIDR-204ENST00000517824 A8MUU9 505 aa5.92□□□□□ -1.46
SPIDR-204ENST00000517824 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
SPIDR-204ENST00000517824 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms