RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 IGLV8-61A0A075B6I0 122 aa6.5□□□□□ -1.37
TRIM55-205ENST00000517647 FAM19A1Q7Z5A9 133 aa6.5□□□□□ -1.37
TRIM55-205ENST00000517647 Q8NBF4 154 aa6.5□□□□□ -1.37
TRIM55-205ENST00000517647 DEFB105AQ8NG35 78 aa6.5□□□□□ -1.37
TRIM55-205ENST00000517647 SPRR4Q96PI1 79 aa6.5□□□□□ -1.37
TRIM55-205ENST00000517647 SPRR1BP22528 89 aa6.49□□□□□ -1.37
TRIM55-205ENST00000517647 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
TRIM55-205ENST00000517647 A0A087X002 238 aa6.48□□□□□ -1.37
TRIM55-205ENST00000517647 PRLHP81277 87 aa6.48□□□□□ -1.37
TRIM55-205ENST00000517647 LRP2P98164 4655 aa6.46□□□□□ -1.37
TRIM55-205ENST00000517647 A0A087WVE0 104 aa6.46□□□□□ -1.38
TRIM55-205ENST00000517647 A0A0A0MQY5 61 aa6.46□□□□□ -1.38
TRIM55-205ENST00000517647 BPY2O14599 106 aa6.46□□□□□ -1.38
TRIM55-205ENST00000517647 ZNF706Q9Y5V0 76 aaPredicted RBP6.46□□□□□ -1.38
TRIM55-205ENST00000517647 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
TRIM55-205ENST00000517647 TYMSOSQ8TAI1 123 aa6.45□□□□□ -1.38
TRIM55-205ENST00000517647 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
TRIM55-205ENST00000517647 SMIM29Q86T20 159 aa6.44□□□□□ -1.38
TRIM55-205ENST00000517647 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
TRIM55-205ENST00000517647 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
TRIM55-205ENST00000517647 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
TRIM55-205ENST00000517647 HIGD2AQ9BW72 106 aa6.43□□□□□ -1.38
TRIM55-205ENST00000517647 TMEM258P61165 79 aa6.42□□□□□ -1.38
TRIM55-205ENST00000517647 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
TRIM55-205ENST00000517647 ANAPC11Q9NYG5 84 aa6.41□□□□□ -1.38
TRIM55-205ENST00000517647 NDUFC1O43677 76 aa6.4□□□□□ -1.38
TRIM55-205ENST00000517647 IGKV4-1P06312 121 aa6.39□□□□□ -1.39
TRIM55-205ENST00000517647 SPAG11AQ6PDA7 123 aa6.39□□□□□ -1.39
TRIM55-205ENST00000517647 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
TRIM55-205ENST00000517647 IGFL1Q6UW32 110 aa6.38□□□□□ -1.39
TRIM55-205ENST00000517647 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
TRIM55-205ENST00000517647 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
TRIM55-205ENST00000517647 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
TRIM55-205ENST00000517647 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
TRIM55-205ENST00000517647 J3KT08 172 aa6.35□□□□□ -1.39
TRIM55-205ENST00000517647 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
TRIM55-205ENST00000517647 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
TRIM55-205ENST00000517647 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
TRIM55-205ENST00000517647 SPINK1P00995 79 aa6.32□□□□□ -1.4
TRIM55-205ENST00000517647 C20orf197Q8N268 126 aa6.32□□□□□ -1.4
TRIM55-205ENST00000517647 SEC61GP60059 68 aa6.31□□□□□ -1.4
TRIM55-205ENST00000517647 PRR4Q16378 134 aa6.31□□□□□ -1.4
TRIM55-205ENST00000517647 OCR1Q9BZK8 76 aa6.31□□□□□ -1.4
TRIM55-205ENST00000517647 LPAP08519 4548 aa6.31□□□□□ -1.4
TRIM55-205ENST00000517647 A0A087WSZ3 146 aa6.3□□□□□ -1.4
TRIM55-205ENST00000517647 DSCR10P59022 87 aa6.3□□□□□ -1.4
TRIM55-205ENST00000517647 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
TRIM55-205ENST00000517647 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-205ENST00000517647 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
TRIM55-205ENST00000517647 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
TRIM55-205ENST00000517647 C5orf47Q569G3 176 aa6.27□□□□□ -1.41
TRIM55-205ENST00000517647 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
TRIM55-205ENST00000517647 A8MWP4 228 aa6.26□□□□□ -1.41
TRIM55-205ENST00000517647 NDUFB1O75438 58 aa6.26□□□□□ -1.41
TRIM55-205ENST00000517647 MOBPQ13875 183 aa6.26□□□□□ -1.41
TRIM55-205ENST00000517647 Q8N9L7 120 aa6.26□□□□□ -1.41
TRIM55-205ENST00000517647 LINC00472Q9H8W2 130 aa6.26□□□□□ -1.41
TRIM55-205ENST00000517647 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
TRIM55-205ENST00000517647 FAM236DA0A1B0GTK5 79 aa6.25□□□□□ -1.41
TRIM55-205ENST00000517647 H7BZZ5 65 aa6.25□□□□□ -1.41
TRIM55-205ENST00000517647 K7EQZ3 153 aa6.25□□□□□ -1.41
TRIM55-205ENST00000517647 FAM236CP0DP71 79 aa6.25□□□□□ -1.41
TRIM55-205ENST00000517647 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
TRIM55-205ENST00000517647 H3BPC8 53 aa6.24□□□□□ -1.41
TRIM55-205ENST00000517647 PRR15Q8IV56 129 aa6.24□□□□□ -1.41
TRIM55-205ENST00000517647 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
TRIM55-205ENST00000517647 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
TRIM55-205ENST00000517647 CD164Q04900 197 aa6.23□□□□□ -1.41
TRIM55-205ENST00000517647 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
TRIM55-205ENST00000517647 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
TRIM55-205ENST00000517647 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
TRIM55-205ENST00000517647 Q5XG85 94 aa6.2□□□□□ -1.42
TRIM55-205ENST00000517647 MP68P56378 58 aa6.19□□□□□ -1.42
TRIM55-205ENST00000517647 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
TRIM55-205ENST00000517647 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
TRIM55-205ENST00000517647 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
TRIM55-205ENST00000517647 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
TRIM55-205ENST00000517647 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
TRIM55-205ENST00000517647 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
TRIM55-205ENST00000517647 A0A0G2JQZ4 141 aa6.16□□□□□ -1.42
TRIM55-205ENST00000517647 ZCCHC13Q8WW36 166 aaKnown RBP6.15□□□□□ -1.42
TRIM55-205ENST00000517647 hDV103S1A0JD37 113 aa6.14□□□□□ -1.43
TRIM55-205ENST00000517647 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
TRIM55-205ENST00000517647 WFDC13Q8IUB5 93 aa6.13□□□□□ -1.43
TRIM55-205ENST00000517647 Q96NJ1 140 aa6.13□□□□□ -1.43
TRIM55-205ENST00000517647 MUC2Q02817 5179 aa6.13□□□□□ -1.43
TRIM55-205ENST00000517647 MMP24-AS1A0A0U1RRL7 71 aa6.12□□□□□ -1.43
TRIM55-205ENST00000517647 A0A1B0GVX0 72 aa6.12□□□□□ -1.43
TRIM55-205ENST00000517647 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
TRIM55-205ENST00000517647 Q75L30 129 aa6.12□□□□□ -1.43
TRIM55-205ENST00000517647 SMIM26A0A096LP01 95 aa6.1□□□□□ -1.43
TRIM55-205ENST00000517647 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
TRIM55-205ENST00000517647 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
TRIM55-205ENST00000517647 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
TRIM55-205ENST00000517647 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
TRIM55-205ENST00000517647 H0Y9P7 68 aa6.08□□□□□ -1.44
TRIM55-205ENST00000517647 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
TRIM55-205ENST00000517647 TRAV22A0A0B4J277 110 aa6.07□□□□□ -1.44
TRIM55-205ENST00000517647 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
TRIM55-205ENST00000517647 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms