RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 UQCR11O14957 56 aa2□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 RPS29P62273 56 aaKnown RBP2□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 C4orf48Q5BLP8 95 aa2□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 A6NN06 94 aa1.99□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 SPINK1P00995 79 aa1.99□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 IGKV2-30P06310 120 aa1.99□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 SPINK6Q6UWN8 80 aa1.99□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 TENM1Q9UKZ4 2725 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 MAST4O15021 2626 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 PANO1I0J062 215 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 KRTAP13-3Q3SY46 172 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 Q5W150 140 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 LCA10Q71F78 164 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 TENM3Q9P273 2699 aa1.98□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 BAHCC1Q9P281 2608 aa1.97□□□□□ -2.09
RNU4ATAC3P-201ENST00000516699 HECTD1Q9ULT8 2610 aa1.96□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 MIR22HGQ0VDD5 57 aa1.96□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 Q6ZSA8 131 aa1.96□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 RBM12B-AS1Q9P1G2 102 aa1.96□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 DNAH3Q8TD57 4116 aa1.96□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 IGKV2D-30A0A075B6S6 120 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 LY6G6CO95867 125 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 PLA2G1BP04054 148 aaKnown RBP1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 SPINK7P58062 85 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 PKD1L1Q8TDX9 2849 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 TRRAPQ9Y4A5 3859 aa1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 NOTCH2NLQ7Z3S9 236 aa1.94□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 TYMSOSQ8TAI1 123 aa1.94□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 STAB1Q9NY15 2570 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 ANK2Q01484 3957 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 KRTAP16-1A8MUX0 517 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 K7ERS5 55 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 ANAPC11Q9NYG5 84 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 TENM2Q9NT68 2774 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 NBEAL1Q6ZS30 2694 aa1.93□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 DNAH1Q9P2D7 4330 aa1.92□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 A8MU10 97 aa1.91□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 LCE3BQ5TA77 95 aa1.91□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 KRTAP9-4Q9BYQ2 154 aa1.91□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
RNU4ATAC3P-201ENST00000516699 KRTAP1-4P0C5Y4 121 aa1.9□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 LINC01554Q52M75 96 aa1.9□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 STAB2Q8WWQ8 2551 aa1.9□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 CMYA5Q8N3K9 4069 aa1.89□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 HUWE1Q7Z6Z7 4374 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 KRTAP10-2P60368 255 aa1.89□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 C20orf166-AS1Q96NR2 134 aa1.89□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 FBN1P35555 2871 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 A8MUU9 505 aa1.88□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 COL6A5A8TX70 2615 aa1.88□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 MGAM2Q2M2H8 2515 aa1.87□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 KRTAP4-8A0A0G2JLE6 195 aa1.87□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 A0A1B0GU33 70 aa1.87□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 KRTAP10-1P60331 282 aa1.87□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 DYNC2H1Q8NCM8 4307 aaKnown RBP1.86□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 KRTAP19-1Q8IUB9 90 aa1.86□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 H1FX-AS1Q4G0G2 97 aa1.85□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 COX6B2Q6YFQ2 88 aa1.85□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 Q8N1X5 172 aa1.85□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 COL7A1Q02388 2944 aa1.85□□□□□ -2.11
RNU4ATAC3P-201ENST00000516699 CSAG1Q6PB30 78 aa1.83□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 PRAC1Q96KF2 57 aa1.83□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 ALMS1Q8TCU4 4167 aa1.83□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 SRRM2Q9UQ35 2752 aaKnown RBP1.83□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 DNAH6Q9C0G6 4158 aa1.82□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 DNAH9Q9NYC9 4486 aa1.82□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 H0YAA0 97 aa1.82□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 KRTAP25-1Q3LHN0 102 aa1.82□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 LYSTQ99698 3801 aa1.82□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 PRKDCP78527 4128 aaKnown RBP1.81□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 CSMD3Q7Z407 3707 aa1.81□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 C9orf92A6NGG3 77 aa1.81□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 DNAH10Q8IVF4 4471 aa1.81□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 DNAH7Q8WXX0 4024 aa1.81□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 HECTD4Q9Y4D8 3996 aa1.81□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 MEGF8Q7Z7M0 2845 aa1.8□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 ROMO1P60602 79 aa1.8□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 RPL37P61927 97 aaKnown RBP1.8□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 S4R3F8 94 aa1.8□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 FRAS1Q86XX4 4008 aa1.8□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 LCE1DQ5T752 114 aa1.79□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 ADM2Q7Z4H4 148 aa1.79□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 VPS13DQ5THJ4 4388 aa1.79□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 TGP01266 2768 aa1.78□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 A0A1B0GVY2 172 aa1.78□□□□□ -2.12
RNU4ATAC3P-201ENST00000516699 STARD9Q9P2P6 4700 aa1.77□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 FBN3Q75N90 2809 aa1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 DNAH17Q9UFH2 4485 aa1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 M0QZ58 72 aa1.76□□□□□ -2.13
RNU4ATAC3P-201ENST00000516699 SMR3BP02814 79 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms