RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 A8MWP4 228 aa9.36□□□□□ -0.91
AP3S1-208ENST00000515066 LCE2BO14633 110 aa9.35□□□□□ -0.91
AP3S1-208ENST00000515066 ATP5EP2Q5VTU8 51 aa9.35□□□□□ -0.91
AP3S1-208ENST00000515066 Q8N9L7 120 aa9.35□□□□□ -0.91
AP3S1-208ENST00000515066 K7EQZ3 153 aa9.34□□□□□ -0.91
AP3S1-208ENST00000515066 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
AP3S1-208ENST00000515066 PRR4Q16378 134 aa9.31□□□□□ -0.92
AP3S1-208ENST00000515066 PRR15Q8IV56 129 aa9.31□□□□□ -0.92
AP3S1-208ENST00000515066 IGLV7-46A0A075B6I9 117 aa9.3□□□□□ -0.92
AP3S1-208ENST00000515066 NOTCH2NLQ7Z3S9 236 aa9.29□□□□□ -0.92
AP3S1-208ENST00000515066 LPAP08519 4548 aa9.29□□□□□ -0.92
AP3S1-208ENST00000515066 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
AP3S1-208ENST00000515066 NDUFB1O75438 58 aa9.29□□□□□ -0.92
AP3S1-208ENST00000515066 MT-ATP8P03928 68 aa9.29□□□□□ -0.92
AP3S1-208ENST00000515066 KRTAP13-3Q3SY46 172 aa9.25□□□□□ -0.93
AP3S1-208ENST00000515066 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
AP3S1-208ENST00000515066 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
AP3S1-208ENST00000515066 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
AP3S1-208ENST00000515066 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
AP3S1-208ENST00000515066 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
AP3S1-208ENST00000515066 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
AP3S1-208ENST00000515066 A0A087WVE0 104 aa9.21□□□□□ -0.93
AP3S1-208ENST00000515066 LINC00313P59037 77 aa9.21□□□□□ -0.93
AP3S1-208ENST00000515066 LRP2P98164 4655 aa9.2□□□□□ -0.94
AP3S1-208ENST00000515066 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
AP3S1-208ENST00000515066 KRTAP16-1A8MUX0 517 aa9.2□□□□□ -0.94
AP3S1-208ENST00000515066 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
AP3S1-208ENST00000515066 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
AP3S1-208ENST00000515066 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
AP3S1-208ENST00000515066 WFDC13Q8IUB5 93 aa9.15□□□□□ -0.94
AP3S1-208ENST00000515066 XP32Q5T750 250 aa9.13□□□□□ -0.95
AP3S1-208ENST00000515066 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
AP3S1-208ENST00000515066 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
AP3S1-208ENST00000515066 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
AP3S1-208ENST00000515066 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
AP3S1-208ENST00000515066 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
AP3S1-208ENST00000515066 A8MUU9 505 aa9.07□□□□□ -0.96
AP3S1-208ENST00000515066 Q75L30 129 aa9.04□□□□□ -0.96
AP3S1-208ENST00000515066 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
AP3S1-208ENST00000515066 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
AP3S1-208ENST00000515066 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
AP3S1-208ENST00000515066 NDUFS5O43920 106 aa8.99□□□□□ -0.97
AP3S1-208ENST00000515066 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
AP3S1-208ENST00000515066 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
AP3S1-208ENST00000515066 Q5W150 140 aa8.92□□□□□ -0.98
AP3S1-208ENST00000515066 ZCCHC13Q8WW36 166 aaKnown RBP8.91□□□□□ -0.98
AP3S1-208ENST00000515066 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
AP3S1-208ENST00000515066 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
AP3S1-208ENST00000515066 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
AP3S1-208ENST00000515066 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
AP3S1-208ENST00000515066 ATOX1O00244 68 aa8.88□□□□□ -0.99
AP3S1-208ENST00000515066 UQCRQO14949 82 aa8.86□□□□□ -0.99
AP3S1-208ENST00000515066 UBR4Q5T4S7 5183 aa8.86□□□□□ -0.99
AP3S1-208ENST00000515066 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
AP3S1-208ENST00000515066 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
AP3S1-208ENST00000515066 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
AP3S1-208ENST00000515066 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
AP3S1-208ENST00000515066 LCE2CQ5TA81 110 aa8.79□□□□□ -1
AP3S1-208ENST00000515066 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
AP3S1-208ENST00000515066 MUC2Q02817 5179 aa8.78□□□□□ -1
AP3S1-208ENST00000515066 H0Y9P7 68 aa8.78□□□□□ -1
AP3S1-208ENST00000515066 SERP2Q8N6R1 65 aa8.78□□□□□ -1
AP3S1-208ENST00000515066 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
AP3S1-208ENST00000515066 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
AP3S1-208ENST00000515066 IGKV2-30P06310 120 aa8.72□□□□□ -1.01
AP3S1-208ENST00000515066 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
AP3S1-208ENST00000515066 SPINK7P58062 85 aa8.72□□□□□ -1.01
AP3S1-208ENST00000515066 ANAPC13Q9BS18 74 aa8.72□□□□□ -1.01
AP3S1-208ENST00000515066 MP68P56378 58 aa8.71□□□□□ -1.02
AP3S1-208ENST00000515066 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
AP3S1-208ENST00000515066 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
AP3S1-208ENST00000515066 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
AP3S1-208ENST00000515066 COX7CP15954 63 aa8.69□□□□□ -1.02
AP3S1-208ENST00000515066 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
AP3S1-208ENST00000515066 CYP4F30PQ9H0H9 118 aa8.68□□□□□ -1.02
AP3S1-208ENST00000515066 H3BPC8 53 aa8.67□□□□□ -1.02
AP3S1-208ENST00000515066 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
AP3S1-208ENST00000515066 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
AP3S1-208ENST00000515066 C20orf197Q8N268 126 aa8.64□□□□□ -1.03
AP3S1-208ENST00000515066 HRES1P13985 223 aa8.63□□□□□ -1.03
AP3S1-208ENST00000515066 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
AP3S1-208ENST00000515066 KLKP1Q107X0 134 aa8.59□□□□□ -1.03
AP3S1-208ENST00000515066 MPLKIPQ8TAP9 179 aa8.59□□□□□ -1.03
AP3S1-208ENST00000515066 CCDC179H3BU77 68 aa8.56□□□□□ -1.04
AP3S1-208ENST00000515066 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
AP3S1-208ENST00000515066 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
AP3S1-208ENST00000515066 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
AP3S1-208ENST00000515066 KRTAP19-2Q3LHN2 52 aa8.53□□□□□ -1.04
AP3S1-208ENST00000515066 FAT4Q6V0I7 4981 aa8.48□□□□□ -1.05
AP3S1-208ENST00000515066 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
AP3S1-208ENST00000515066 H7BZZ5 65 aa8.45□□□□□ -1.06
AP3S1-208ENST00000515066 PCP4P48539 62 aa8.45□□□□□ -1.06
AP3S1-208ENST00000515066 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
AP3S1-208ENST00000515066 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
AP3S1-208ENST00000515066 NDUFC1O43677 76 aa8.42□□□□□ -1.06
AP3S1-208ENST00000515066 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
AP3S1-208ENST00000515066 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
AP3S1-208ENST00000515066 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
AP3S1-208ENST00000515066 FLGP20930 4061 aaPredicted RBP8.35□□□□□ -1.07
AP3S1-208ENST00000515066 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms