RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
SMAD1-214ENST00000514831 A6NJY4 79 aa10.87□□□□□ -0.67
SMAD1-214ENST00000514831 CEND1Q8N111 149 aa10.87□□□□□ -0.67
SMAD1-214ENST00000514831 TMEM256-PLSCR3K7ERE1 68 aa10.86□□□□□ -0.67
SMAD1-214ENST00000514831 WFDC13Q8IUB5 93 aa10.86□□□□□ -0.67
SMAD1-214ENST00000514831 S100A6P06703 90 aa10.85□□□□□ -0.67
SMAD1-214ENST00000514831 FXYD2P54710 66 aa10.81□□□□□ -0.68
SMAD1-214ENST00000514831 SPATA45Q537H7 98 aa10.8□□□□□ -0.68
SMAD1-214ENST00000514831 PAM16Q9Y3D7 125 aa10.8□□□□□ -0.68
SMAD1-214ENST00000514831 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
SMAD1-214ENST00000514831 J3KT08 172 aa10.78□□□□□ -0.68
SMAD1-214ENST00000514831 VPS25Q9BRG1 176 aa10.78□□□□□ -0.68
SMAD1-214ENST00000514831 PSMB2P49721 201 aa10.73□□□□□ -0.69
SMAD1-214ENST00000514831 VAMP8Q9BV40 100 aa10.71□□□□□ -0.69
SMAD1-214ENST00000514831 COX6CP09669 75 aa10.7□□□□□ -0.7
SMAD1-214ENST00000514831 RBM3P98179 157 aaKnown RBP10.7□□□□□ -0.7
SMAD1-214ENST00000514831 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
SMAD1-214ENST00000514831 NDUFB1O75438 58 aa10.69□□□□□ -0.7
SMAD1-214ENST00000514831 DSCR8Q96T75 97 aa10.69□□□□□ -0.7
SMAD1-214ENST00000514831 LYRM7Q5U5X0 104 aa10.68□□□□□ -0.7
SMAD1-214ENST00000514831 NEBP20929 6669 aa10.67□□□□□ -0.7
SMAD1-214ENST00000514831 K7ERJ3 54 aa10.66□□□□□ -0.7
SMAD1-214ENST00000514831 C8orf17Q9NRJ1 99 aa10.66□□□□□ -0.7
SMAD1-214ENST00000514831 S100A1P23297 94 aa10.64□□□□□ -0.71
SMAD1-214ENST00000514831 H1FX-AS1Q4G0G2 97 aa10.64□□□□□ -0.71
SMAD1-214ENST00000514831 Q6ZQT0 140 aa10.64□□□□□ -0.71
SMAD1-214ENST00000514831 IGKV3D-7A0A0C4DH55 119 aa10.6□□□□□ -0.71
SMAD1-214ENST00000514831 C9JAW5 83 aa10.59□□□□□ -0.71
SMAD1-214ENST00000514831 HSD52Q0P140 79 aa10.59□□□□□ -0.71
SMAD1-214ENST00000514831 Q6ZVQ6 151 aa10.57□□□□□ -0.72
SMAD1-214ENST00000514831 A0A1B0GW54 56 aa10.48□□□□□ -0.73
SMAD1-214ENST00000514831 A6NN06 94 aa10.48□□□□□ -0.73
SMAD1-214ENST00000514831 BAALC-AS2P0C853 105 aa10.48□□□□□ -0.73
SMAD1-214ENST00000514831 SCGB1C2P0DMR2 95 aa10.47□□□□□ -0.73
SMAD1-214ENST00000514831 PRR15Q8IV56 129 aa10.47□□□□□ -0.73
SMAD1-214ENST00000514831 TMEM254Q8TBM7 123 aa10.46□□□□□ -0.73
SMAD1-214ENST00000514831 MRPL34Q9BQ48 92 aaKnown RBP10.46□□□□□ -0.73
SMAD1-214ENST00000514831 MUC12Q9UKN1 5478 aa10.44□□□□□ -0.74
SMAD1-214ENST00000514831 MMP24-AS1A0A0U1RRL7 71 aa10.44□□□□□ -0.74
SMAD1-214ENST00000514831 KRTAP20-1Q3LI63 56 aa10.44□□□□□ -0.74
SMAD1-214ENST00000514831 LOC110117498A0A087WWA1 95 aa10.42□□□□□ -0.74
SMAD1-214ENST00000514831 MT1BP07438 61 aa10.4□□□□□ -0.74
SMAD1-214ENST00000514831 JMJD7-PLA2G4BH0Y9G9 81 aa10.39□□□□□ -0.75
SMAD1-214ENST00000514831 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
SMAD1-214ENST00000514831 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
SMAD1-214ENST00000514831 C7orf65Q6ZTY9 151 aa10.37□□□□□ -0.75
SMAD1-214ENST00000514831 NDUFS5O43920 106 aa10.35□□□□□ -0.75
SMAD1-214ENST00000514831 PDE6GP18545 87 aa10.35□□□□□ -0.75
SMAD1-214ENST00000514831 hDV103S1A0JD37 113 aa10.34□□□□□ -0.75
SMAD1-214ENST00000514831 Q5VV11 94 aa10.34□□□□□ -0.75
SMAD1-214ENST00000514831 FAM236AA0A1B0GUQ0 79 aa10.31□□□□□ -0.76
SMAD1-214ENST00000514831 FAM236BA0A1B0GV22 79 aa10.31□□□□□ -0.76
SMAD1-214ENST00000514831 NREPQ16612 68 aa10.31□□□□□ -0.76
SMAD1-214ENST00000514831 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
SMAD1-214ENST00000514831 KRTAP5-9P26371 169 aa10.3□□□□□ -0.76
SMAD1-214ENST00000514831 KRTAP19-8Q3LI54 63 aa10.3□□□□□ -0.76
SMAD1-214ENST00000514831 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
SMAD1-214ENST00000514831 UQCR10Q9UDW1 63 aa10.29□□□□□ -0.76
SMAD1-214ENST00000514831 K7EQZ3 153 aa10.28□□□□□ -0.76
SMAD1-214ENST00000514831 KRTAP10-5P60370 271 aa10.28□□□□□ -0.76
SMAD1-214ENST00000514831 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
SMAD1-214ENST00000514831 Q5W150 140 aa10.27□□□□□ -0.77
SMAD1-214ENST00000514831 SPRR2GQ9BYE4 73 aa10.27□□□□□ -0.77
SMAD1-214ENST00000514831 C4orf26Q17RF5 130 aa10.25□□□□□ -0.77
SMAD1-214ENST00000514831 C5orf47Q569G3 176 aa10.25□□□□□ -0.77
SMAD1-214ENST00000514831 NAA38Q9BRA0 125 aaKnown RBP10.13□□□□□ -0.79
SMAD1-214ENST00000514831 S4R3F8 94 aa10.13□□□□□ -0.79
SMAD1-214ENST00000514831 KMT2DO14686 5537 aa10.12□□□□□ -0.79
SMAD1-214ENST00000514831 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
SMAD1-214ENST00000514831 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
SMAD1-214ENST00000514831 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
SMAD1-214ENST00000514831 BPY2O14599 106 aa10.08□□□□□ -0.8
SMAD1-214ENST00000514831 CASC2Q6XLA1 102 aa10.07□□□□□ -0.8
SMAD1-214ENST00000514831 MDN1Q9NU22 5596 aa10.06□□□□□ -0.8
SMAD1-214ENST00000514831 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
SMAD1-214ENST00000514831 CXCL6P80162 114 aa10.05□□□□□ -0.8
SMAD1-214ENST00000514831 LCA10Q71F78 164 aa10.05□□□□□ -0.8
SMAD1-214ENST00000514831 KRTAP2-3P0C7H8 128 aa10.02□□□□□ -0.81
SMAD1-214ENST00000514831 KRTAP2-4Q9BYR9 128 aa10.02□□□□□ -0.81
SMAD1-214ENST00000514831 M0R143 59 aa10.01□□□□□ -0.81
SMAD1-214ENST00000514831 Q8N9L7 120 aa10.01□□□□□ -0.81
SMAD1-214ENST00000514831 C1orf64Q8NEQ6 169 aa9.99□□□□□ -0.81
SMAD1-214ENST00000514831 IMUPQ9GZP8 106 aa9.96□□□□□ -0.82
SMAD1-214ENST00000514831 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-214ENST00000514831 H3BT86 120 aa9.9□□□□□ -0.82
SMAD1-214ENST00000514831 CRIPTQ9P021 101 aa9.88□□□□□ -0.83
SMAD1-214ENST00000514831 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
SMAD1-214ENST00000514831 SPRR2FQ96RM1 72 aa9.83□□□□□ -0.84
SMAD1-214ENST00000514831 SPRR2EP22531 72 aa9.82□□□□□ -0.84
SMAD1-214ENST00000514831 SPRR2BP35325 72 aa9.82□□□□□ -0.84
SMAD1-214ENST00000514831 SPRR2AP35326 72 aa9.82□□□□□ -0.84
SMAD1-214ENST00000514831 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
SMAD1-214ENST00000514831 TMA7Q9Y2S6 64 aaKnown RBP9.74□□□□□ -0.85
SMAD1-214ENST00000514831 TP53AIP1Q9HCN2 124 aa9.69□□□□□ -0.86
SMAD1-214ENST00000514831 KRTAP2-2Q9BYT5 123 aa9.67□□□□□ -0.86
SMAD1-214ENST00000514831 KRTAP2-1Q9BYU5 128 aa9.67□□□□□ -0.86
SMAD1-214ENST00000514831 A0A087WVE0 104 aa9.66□□□□□ -0.86
SMAD1-214ENST00000514831 C9orf118A6NHY6 69 aa9.66□□□□□ -0.86
SMAD1-214ENST00000514831 BATFQ16520 125 aa9.66□□□□□ -0.86
SMAD1-214ENST00000514831 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms