RNA–Protein interactions for RNA: ENST00000514485.5

PACRGL-231, Transcript of parkin coregulated like, human

TSL 3

Gene PACRGL, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-231	ENST00000514485	FSIP2	Q5CZC0	6907 aa		11.17	□□□□□ -0.62
PACRGL-231	ENST00000514485		A8MUU9	505 aa		11.17	□□□□□ -0.62
PACRGL-231	ENST00000514485	LINC00313	P59037	77 aa		11.17	□□□□□ -0.62
PACRGL-231	ENST00000514485	NOTCH2NL	Q7Z3S9	236 aa		11.16	□□□□□ -0.62
PACRGL-231	ENST00000514485	IGHV6-1	A0A0B4J1U7	121 aa		11.15	□□□□□ -0.62
PACRGL-231	ENST00000514485	C21orf62-AS1	Q17RA5	79 aa		11.14	□□□□□ -0.63
PACRGL-231	ENST00000514485	PDE6G	P18545	87 aa		11.13	□□□□□ -0.63
PACRGL-231	ENST00000514485	KRTAP16-1	A8MUX0	517 aa		11.12	□□□□□ -0.63
PACRGL-231	ENST00000514485		H3BT86	120 aa		11.12	□□□□□ -0.63
PACRGL-231	ENST00000514485	CRCT1	Q9UGL9	99 aa		11.12	□□□□□ -0.63
PACRGL-231	ENST00000514485	LOR	P23490	312 aa	Predicted RBP	11.1	□□□□□ -0.63
PACRGL-231	ENST00000514485		A0A1B0GVX0	72 aa		11.09	□□□□□ -0.63
PACRGL-231	ENST00000514485	SPCS1	Q9Y6A9	102 aa		11.09	□□□□□ -0.63
PACRGL-231	ENST00000514485	KRTAP10-6	P60371	365 aa	Predicted RBP	11.08	□□□□□ -0.64
PACRGL-231	ENST00000514485	COL5A1-AS1	Q5SY13	56 aa		11.08	□□□□□ -0.64
PACRGL-231	ENST00000514485		A0A1B0GW54	56 aa		11.07	□□□□□ -0.64
PACRGL-231	ENST00000514485		J3KT08	172 aa		11.07	□□□□□ -0.64
PACRGL-231	ENST00000514485	C8orf87	E5RJ46	101 aa		11.04	□□□□□ -0.64
PACRGL-231	ENST00000514485	COX6B2	Q6YFQ2	88 aa		11.03	□□□□□ -0.64
PACRGL-231	ENST00000514485	PCP4L1	A6NKN8	68 aa		11.01	□□□□□ -0.65
PACRGL-231	ENST00000514485		M0R2T5	61 aa		11.01	□□□□□ -0.65
PACRGL-231	ENST00000514485	NDUFB1	O75438	58 aa		11	□□□□□ -0.65
PACRGL-231	ENST00000514485	NREP	Q16612	68 aa		10.98	□□□□□ -0.65
PACRGL-231	ENST00000514485		A8MWP4	228 aa		10.97	□□□□□ -0.65
PACRGL-231	ENST00000514485	SMCP	P49901	116 aa	Predicted RBP	10.97	□□□□□ -0.65
PACRGL-231	ENST00000514485	IGKV3D-7	A0A0C4DH55	119 aa		10.94	□□□□□ -0.66
PACRGL-231	ENST00000514485		K7EP34	96 aa		10.93	□□□□□ -0.66
PACRGL-231	ENST00000514485	C8orf17	Q9NRJ1	99 aa		10.93	□□□□□ -0.66
PACRGL-231	ENST00000514485	PRO0461	Q9UI25	63 aa		10.91	□□□□□ -0.66
PACRGL-231	ENST00000514485	PRR15	Q8IV56	129 aa		10.87	□□□□□ -0.67
PACRGL-231	ENST00000514485		Q8N9P0	234 aa	Predicted RBP	10.84	□□□□□ -0.67
PACRGL-231	ENST00000514485	ZCCHC13	Q8WW36	166 aa	Known RBP	10.83	□□□□□ -0.68
PACRGL-231	ENST00000514485		Q6ZVQ6	151 aa		10.82	□□□□□ -0.68
PACRGL-231	ENST00000514485		K7EQZ3	153 aa		10.81	□□□□□ -0.68
PACRGL-231	ENST00000514485	BPY2	O14599	106 aa		10.81	□□□□□ -0.68
PACRGL-231	ENST00000514485	GTF2H5	Q6ZYL4	71 aa		10.81	□□□□□ -0.68
PACRGL-231	ENST00000514485	MMP24-AS1	A0A0U1RRL7	71 aa		10.8	□□□□□ -0.68
PACRGL-231	ENST00000514485	HRES1	P13985	223 aa		10.76	□□□□□ -0.69
PACRGL-231	ENST00000514485	MRPL34	Q9BQ48	92 aa	Known RBP	10.75	□□□□□ -0.69
PACRGL-231	ENST00000514485	TMEM254	Q8TBM7	123 aa		10.74	□□□□□ -0.69
PACRGL-231	ENST00000514485	FAM236D	A0A1B0GTK5	79 aa		10.73	□□□□□ -0.69
PACRGL-231	ENST00000514485	hDV103S1	A0JD37	113 aa		10.73	□□□□□ -0.69
PACRGL-231	ENST00000514485	FAM236C	P0DP71	79 aa		10.73	□□□□□ -0.69
PACRGL-231	ENST00000514485	LINC00846	Q9NV44	126 aa		10.73	□□□□□ -0.69
PACRGL-231	ENST00000514485		Q8N9L7	120 aa		10.72	□□□□□ -0.69
PACRGL-231	ENST00000514485	RBM12B-AS1	Q9P1G2	102 aa		10.71	□□□□□ -0.69
PACRGL-231	ENST00000514485		F8W1H4	67 aa		10.7	□□□□□ -0.7
PACRGL-231	ENST00000514485	MPLKIP	Q8TAP9	179 aa		10.7	□□□□□ -0.7
PACRGL-231	ENST00000514485	SPINK7	P58062	85 aa		10.69	□□□□□ -0.7
PACRGL-231	ENST00000514485	NDUFS5	O43920	106 aa		10.68	□□□□□ -0.7
PACRGL-231	ENST00000514485	ETDB	Q3ZM63	59 aa		10.68	□□□□□ -0.7
PACRGL-231	ENST00000514485	UBL5	Q9BZL1	73 aa		10.68	□□□□□ -0.7
PACRGL-231	ENST00000514485	WFDC13	Q8IUB5	93 aa		10.66	□□□□□ -0.7
PACRGL-231	ENST00000514485	KRTAP9-8	Q9BYQ0	159 aa		10.64	□□□□□ -0.71
PACRGL-231	ENST00000514485	CASC2	Q6XLA1	102 aa		10.61	□□□□□ -0.71
PACRGL-231	ENST00000514485	USH2A	O75445	5202 aa		10.61	□□□□□ -0.71
PACRGL-231	ENST00000514485	SSPO	A2VEC9	5147 aa		10.56	□□□□□ -0.72
PACRGL-231	ENST00000514485	HCG22	E2RYF7	251 aa		10.55	□□□□□ -0.72
PACRGL-231	ENST00000514485		Q5W150	140 aa		10.53	□□□□□ -0.72
PACRGL-231	ENST00000514485	IGKV2D-30	A0A075B6S6	120 aa		10.47	□□□□□ -0.73
PACRGL-231	ENST00000514485	MT2A	P02795	61 aa		10.47	□□□□□ -0.73
PACRGL-231	ENST00000514485	IGKV2-30	P06310	120 aa		10.47	□□□□□ -0.73
PACRGL-231	ENST00000514485	CXCL6	P80162	114 aa		10.46	□□□□□ -0.73
PACRGL-231	ENST00000514485	C7orf65	Q6ZTY9	151 aa		10.42	□□□□□ -0.74
PACRGL-231	ENST00000514485		A0A1B0GV90	55 aa		10.4	□□□□□ -0.74
PACRGL-231	ENST00000514485	MT1F	P04733	61 aa		10.4	□□□□□ -0.74
PACRGL-231	ENST00000514485	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.38	□□□□□ -0.75
PACRGL-231	ENST00000514485	ACYP1	P07311	99 aa		10.38	□□□□□ -0.75
PACRGL-231	ENST00000514485	FAM240A	A0A1B0GVK7	77 aa		10.34	□□□□□ -0.75
PACRGL-231	ENST00000514485	LCE2B	O14633	110 aa		10.33	□□□□□ -0.76
PACRGL-231	ENST00000514485	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.32	□□□□□ -0.76
PACRGL-231	ENST00000514485	KRTAP9-3	Q9BYQ3	159 aa		10.31	□□□□□ -0.76
PACRGL-231	ENST00000514485	KRTAP9-7	A8MTY7	169 aa		10.3	□□□□□ -0.76
PACRGL-231	ENST00000514485	KRTAP10-10	P60014	251 aa		10.3	□□□□□ -0.76
PACRGL-231	ENST00000514485	H1FX-AS1	Q4G0G2	97 aa		10.29	□□□□□ -0.76
PACRGL-231	ENST00000514485	TP53AIP1	Q9HCN2	124 aa		10.27	□□□□□ -0.77
PACRGL-231	ENST00000514485	C4orf26	Q17RF5	130 aa		10.26	□□□□□ -0.77
PACRGL-231	ENST00000514485	ATP5EP2	Q5VTU8	51 aa		10.25	□□□□□ -0.77
PACRGL-231	ENST00000514485	KRTAP19-1	Q8IUB9	90 aa		10.24	□□□□□ -0.77
PACRGL-231	ENST00000514485	HIST1H4A	P62805	103 aa	Known RBP	10.23	□□□□□ -0.77
PACRGL-231	ENST00000514485	LINC00643	Q86TS7	51 aa		10.16	□□□□□ -0.78
PACRGL-231	ENST00000514485		A0A087WVE0	104 aa		10.12	□□□□□ -0.79
PACRGL-231	ENST00000514485	TRAV22	A0A0B4J277	110 aa		10.1	□□□□□ -0.79
PACRGL-231	ENST00000514485	KRTAP3-1	Q9BYR8	98 aa		10.1	□□□□□ -0.79
PACRGL-231	ENST00000514485	C1orf64	Q8NEQ6	169 aa		10.09	□□□□□ -0.79
PACRGL-231	ENST00000514485	CYP4F30P	Q9H0H9	118 aa		10.07	□□□□□ -0.8
PACRGL-231	ENST00000514485		J3QR89	54 aa		10.03	□□□□□ -0.8
PACRGL-231	ENST00000514485	UQCRQ	O14949	82 aa		10.03	□□□□□ -0.8
PACRGL-231	ENST00000514485	MACF1	Q9UPN3	7388 aa	Known RBP	10.02	□□□□□ -0.81
PACRGL-231	ENST00000514485	LOC101927531	A0A1B0GV80	90 aa		10.01	□□□□□ -0.81
PACRGL-231	ENST00000514485		H0Y9P7	68 aa		10.01	□□□□□ -0.81
PACRGL-231	ENST00000514485		S4R3F8	94 aa		10	□□□□□ -0.81
PACRGL-231	ENST00000514485	C5orf47	Q569G3	176 aa		9.99	□□□□□ -0.81
PACRGL-231	ENST00000514485	KRTAP19-6	Q3LI70	58 aa		9.97	□□□□□ -0.81
PACRGL-231	ENST00000514485	ATOX1	O00244	68 aa		9.94	□□□□□ -0.82
PACRGL-231	ENST00000514485	LCA10	Q71F78	164 aa		9.93	□□□□□ -0.82
PACRGL-231	ENST00000514485	SYNE2	Q8WXH0	6885 aa	Known RBP	9.91	□□□□□ -0.82
PACRGL-231	ENST00000514485	OCR1	Q9BZK8	76 aa		9.88	□□□□□ -0.83
PACRGL-231	ENST00000514485	CSAG1	Q6PB30	78 aa		9.87	□□□□□ -0.83
PACRGL-231	ENST00000514485	LINC00208	Q96KT6	92 aa		9.86	□□□□□ -0.83

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