RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 FAM229AH3BQW9 127 aa4.82□□□□□ -1.64
CPNE4-211ENST00000514439 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
CPNE4-211ENST00000514439 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
CPNE4-211ENST00000514439 Q5XG85 94 aa4.81□□□□□ -1.64
CPNE4-211ENST00000514439 SSBP3-AS1Q7Z2R9 100 aa4.81□□□□□ -1.64
CPNE4-211ENST00000514439 LRP1BQ9NZR2 4599 aa4.81□□□□□ -1.64
CPNE4-211ENST00000514439 TRAV22A0A0B4J277 110 aa4.81□□□□□ -1.64
CPNE4-211ENST00000514439 CD164Q04900 197 aa4.81□□□□□ -1.64
CPNE4-211ENST00000514439 A0A087X002 238 aa4.8□□□□□ -1.64
CPNE4-211ENST00000514439 H3BPC8 53 aa4.8□□□□□ -1.64
CPNE4-211ENST00000514439 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
CPNE4-211ENST00000514439 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CPNE4-211ENST00000514439 SMIM26A0A096LP01 95 aa4.78□□□□□ -1.64
CPNE4-211ENST00000514439 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
CPNE4-211ENST00000514439 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
CPNE4-211ENST00000514439 C1orf64Q8NEQ6 169 aa4.78□□□□□ -1.64
CPNE4-211ENST00000514439 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
CPNE4-211ENST00000514439 PRR4Q16378 134 aa4.77□□□□□ -1.65
CPNE4-211ENST00000514439 FAM229BQ4G0N7 80 aa4.77□□□□□ -1.65
CPNE4-211ENST00000514439 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
CPNE4-211ENST00000514439 MRPL34Q9BQ48 92 aaKnown RBP4.77□□□□□ -1.65
CPNE4-211ENST00000514439 NDUFS5O43920 106 aa4.77□□□□□ -1.65
CPNE4-211ENST00000514439 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
CPNE4-211ENST00000514439 SACSQ9NZJ4 4579 aa4.76□□□□□ -1.65
CPNE4-211ENST00000514439 VPS13BQ7Z7G8 4022 aa4.76□□□□□ -1.65
CPNE4-211ENST00000514439 CYP4F30PQ9H0H9 118 aa4.75□□□□□ -1.65
CPNE4-211ENST00000514439 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
CPNE4-211ENST00000514439 SPANXA2-OT1Q8N9U9 137 aa4.73□□□□□ -1.65
CPNE4-211ENST00000514439 LINC00336Q6ZUF6 198 aa4.72□□□□□ -1.65
CPNE4-211ENST00000514439 C1orf195Q5TG92 126 aa4.72□□□□□ -1.65
CPNE4-211ENST00000514439 C8orf87E5RJ46 101 aa4.71□□□□□ -1.66
CPNE4-211ENST00000514439 PLA2G1BP04054 148 aaKnown RBP4.71□□□□□ -1.66
CPNE4-211ENST00000514439 PCOTHQ58A44 107 aa4.7□□□□□ -1.66
CPNE4-211ENST00000514439 MPLKIPQ8TAP9 179 aa4.7□□□□□ -1.66
CPNE4-211ENST00000514439 A0A1B0GVY2 172 aa4.69□□□□□ -1.66
CPNE4-211ENST00000514439 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
CPNE4-211ENST00000514439 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
CPNE4-211ENST00000514439 LINC00313P59037 77 aa4.68□□□□□ -1.66
CPNE4-211ENST00000514439 Q5W150 140 aa4.68□□□□□ -1.66
CPNE4-211ENST00000514439 IGLV7-46A0A075B6I9 117 aa4.68□□□□□ -1.66
CPNE4-211ENST00000514439 SMR3BP02814 79 aaPredicted RBP4.68□□□□□ -1.66
CPNE4-211ENST00000514439 KRTAP13-3Q3SY46 172 aa4.68□□□□□ -1.66
CPNE4-211ENST00000514439 DYNC1H1Q14204 4646 aaKnown RBP4.68□□□□□ -1.66
CPNE4-211ENST00000514439 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
CPNE4-211ENST00000514439 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
CPNE4-211ENST00000514439 SPINK1P00995 79 aa4.66□□□□□ -1.66
CPNE4-211ENST00000514439 PRR26Q8N8Z3 221 aa4.66□□□□□ -1.66
CPNE4-211ENST00000514439 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.66
CPNE4-211ENST00000514439 KRTAP16-1A8MUX0 517 aa4.64□□□□□ -1.67
CPNE4-211ENST00000514439 Q1T7F1 81 aa4.64□□□□□ -1.67
CPNE4-211ENST00000514439 LINC00304Q8N9R0 145 aa4.63□□□□□ -1.67
CPNE4-211ENST00000514439 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
CPNE4-211ENST00000514439 COA5Q86WW8 74 aa4.63□□□□□ -1.67
CPNE4-211ENST00000514439 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
CPNE4-211ENST00000514439 RYR2Q92736 4967 aa4.62□□□□□ -1.67
CPNE4-211ENST00000514439 RETNLBQ9BQ08 111 aa4.62□□□□□ -1.67
CPNE4-211ENST00000514439 FAT1Q14517 4588 aa4.61□□□□□ -1.67
CPNE4-211ENST00000514439 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
CPNE4-211ENST00000514439 SPAG11AQ6PDA7 123 aa4.6□□□□□ -1.67
CPNE4-211ENST00000514439 KMT2CQ8NEZ4 4911 aaKnown RBP4.59□□□□□ -1.68
CPNE4-211ENST00000514439 PSPHP1O15172 72 aa4.58□□□□□ -1.68
CPNE4-211ENST00000514439 HRES1P13985 223 aa4.58□□□□□ -1.68
CPNE4-211ENST00000514439 V9GYY9 64 aa4.58□□□□□ -1.68
CPNE4-211ENST00000514439 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
CPNE4-211ENST00000514439 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
CPNE4-211ENST00000514439 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
CPNE4-211ENST00000514439 A8MUN3 132 aa4.56□□□□□ -1.68
CPNE4-211ENST00000514439 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
CPNE4-211ENST00000514439 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
CPNE4-211ENST00000514439 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
CPNE4-211ENST00000514439 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
CPNE4-211ENST00000514439 IGKV2D-30A0A075B6S6 120 aa4.53□□□□□ -1.68
CPNE4-211ENST00000514439 Q5VV11 94 aa4.53□□□□□ -1.68
CPNE4-211ENST00000514439 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
CPNE4-211ENST00000514439 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
CPNE4-211ENST00000514439 ACYP2P14621 99 aa4.52□□□□□ -1.69
CPNE4-211ENST00000514439 C9orf92A6NGG3 77 aa4.5□□□□□ -1.69
CPNE4-211ENST00000514439 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
CPNE4-211ENST00000514439 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
CPNE4-211ENST00000514439 CHKB-CPT1BH3BT56 60 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 C7orf65Q6ZTY9 151 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 Q75L30 129 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 HSPG2P98160 4391 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 A8MUU9 505 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 Q5VSD8 79 aa4.47□□□□□ -1.69
CPNE4-211ENST00000514439 FLG2Q5D862 2391 aaPredicted RBP4.46□□□□□ -1.7
CPNE4-211ENST00000514439 Q8N1X5 172 aa4.46□□□□□ -1.7
CPNE4-211ENST00000514439 RYR3Q15413 4870 aa4.44□□□□□ -1.7
CPNE4-211ENST00000514439 TNXBP22105 4242 aa4.44□□□□□ -1.7
CPNE4-211ENST00000514439 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
CPNE4-211ENST00000514439 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
CPNE4-211ENST00000514439 A8MU10 97 aa4.43□□□□□ -1.7
CPNE4-211ENST00000514439 A6NED7 52 aa4.42□□□□□ -1.7
CPNE4-211ENST00000514439 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
CPNE4-211ENST00000514439 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
CPNE4-211ENST00000514439 RYR1P21817 5038 aa4.4□□□□□ -1.7
CPNE4-211ENST00000514439 LCA10Q71F78 164 aa4.39□□□□□ -1.71
CPNE4-211ENST00000514439 SPINK7P58062 85 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms