RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
TOPBP1-209ENST00000513818 TRBV7-4A0A0J9YYF1 115 aa5.47□□□□□ -1.53
TOPBP1-209ENST00000513818 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
TOPBP1-209ENST00000513818 TEN1Q86WV5 123 aa5.47□□□□□ -1.53
TOPBP1-209ENST00000513818 H3BT86 120 aa5.46□□□□□ -1.54
TOPBP1-209ENST00000513818 CCKP06307 115 aa5.46□□□□□ -1.54
TOPBP1-209ENST00000513818 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-209ENST00000513818 Q5XG85 94 aa5.46□□□□□ -1.54
TOPBP1-209ENST00000513818 Q6Q795 121 aa5.46□□□□□ -1.54
TOPBP1-209ENST00000513818 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
TOPBP1-209ENST00000513818 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
TOPBP1-209ENST00000513818 DSCR8Q96T75 97 aa5.45□□□□□ -1.54
TOPBP1-209ENST00000513818 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
TOPBP1-209ENST00000513818 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
TOPBP1-209ENST00000513818 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
TOPBP1-209ENST00000513818 PRO0461Q9UI25 63 aa5.43□□□□□ -1.54
TOPBP1-209ENST00000513818 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
TOPBP1-209ENST00000513818 Q6ZQT0 140 aa5.42□□□□□ -1.54
TOPBP1-209ENST00000513818 OBSCN-AS1Q96MR7 158 aa5.42□□□□□ -1.54
TOPBP1-209ENST00000513818 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
TOPBP1-209ENST00000513818 LOC110117498A0A087WWA1 95 aa5.41□□□□□ -1.54
TOPBP1-209ENST00000513818 Q96NJ1 140 aa5.41□□□□□ -1.54
TOPBP1-209ENST00000513818 DEFB116Q30KQ4 102 aa5.4□□□□□ -1.54
TOPBP1-209ENST00000513818 GTF2H5Q6ZYL4 71 aa5.4□□□□□ -1.54
TOPBP1-209ENST00000513818 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
TOPBP1-209ENST00000513818 A0A1B0GV90 55 aa5.37□□□□□ -1.55
TOPBP1-209ENST00000513818 IGKV4-1P06312 121 aa5.35□□□□□ -1.55
TOPBP1-209ENST00000513818 PDE6GP18545 87 aa5.35□□□□□ -1.55
TOPBP1-209ENST00000513818 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
TOPBP1-209ENST00000513818 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
TOPBP1-209ENST00000513818 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
TOPBP1-209ENST00000513818 DSCR10P59022 87 aa5.33□□□□□ -1.56
TOPBP1-209ENST00000513818 ETDBQ3ZM63 59 aa5.33□□□□□ -1.56
TOPBP1-209ENST00000513818 F8W1H4 67 aa5.32□□□□□ -1.56
TOPBP1-209ENST00000513818 MUC2Q02817 5179 aa5.31□□□□□ -1.56
TOPBP1-209ENST00000513818 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
TOPBP1-209ENST00000513818 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
TOPBP1-209ENST00000513818 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
TOPBP1-209ENST00000513818 NOTCH2NLQ7Z3S9 236 aa5.3□□□□□ -1.56
TOPBP1-209ENST00000513818 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
TOPBP1-209ENST00000513818 A0A1B0GW54 56 aa5.28□□□□□ -1.56
TOPBP1-209ENST00000513818 NREPQ16612 68 aa5.28□□□□□ -1.56
TOPBP1-209ENST00000513818 RPL37P61927 97 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-209ENST00000513818 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
TOPBP1-209ENST00000513818 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
TOPBP1-209ENST00000513818 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
TOPBP1-209ENST00000513818 LINC00846Q9NV44 126 aa5.26□□□□□ -1.57
TOPBP1-209ENST00000513818 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
TOPBP1-209ENST00000513818 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
TOPBP1-209ENST00000513818 J3KT08 172 aa5.25□□□□□ -1.57
TOPBP1-209ENST00000513818 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
TOPBP1-209ENST00000513818 A8MWP4 228 aa5.24□□□□□ -1.57
TOPBP1-209ENST00000513818 LINC00313P59037 77 aa5.24□□□□□ -1.57
TOPBP1-209ENST00000513818 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
TOPBP1-209ENST00000513818 K7EQZ3 153 aa5.23□□□□□ -1.57
TOPBP1-209ENST00000513818 BPY2O14599 106 aa5.22□□□□□ -1.57
TOPBP1-209ENST00000513818 Q8N9L7 120 aa5.22□□□□□ -1.57
TOPBP1-209ENST00000513818 A8MUU9 505 aa5.21□□□□□ -1.58
TOPBP1-209ENST00000513818 C8orf87E5RJ46 101 aa5.21□□□□□ -1.58
TOPBP1-209ENST00000513818 NDUFB1O75438 58 aa5.21□□□□□ -1.58
TOPBP1-209ENST00000513818 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
TOPBP1-209ENST00000513818 C8orf17Q9NRJ1 99 aa5.21□□□□□ -1.58
TOPBP1-209ENST00000513818 FAM240AA0A1B0GVK7 77 aa5.2□□□□□ -1.58
TOPBP1-209ENST00000513818 PRR15Q8IV56 129 aa5.2□□□□□ -1.58
TOPBP1-209ENST00000513818 OCR1Q9BZK8 76 aa5.2□□□□□ -1.58
TOPBP1-209ENST00000513818 UBL5Q9BZL1 73 aa5.2□□□□□ -1.58
TOPBP1-209ENST00000513818 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
TOPBP1-209ENST00000513818 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
TOPBP1-209ENST00000513818 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
TOPBP1-209ENST00000513818 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
TOPBP1-209ENST00000513818 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
TOPBP1-209ENST00000513818 ACYP1P07311 99 aa5.12□□□□□ -1.59
TOPBP1-209ENST00000513818 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-209ENST00000513818 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
TOPBP1-209ENST00000513818 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-209ENST00000513818 NDUFS5O43920 106 aa5.1□□□□□ -1.59
TOPBP1-209ENST00000513818 CASC2Q6XLA1 102 aa5.1□□□□□ -1.59
TOPBP1-209ENST00000513818 ZCCHC13Q8WW36 166 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-209ENST00000513818 CXCL6P80162 114 aa5.09□□□□□ -1.59
TOPBP1-209ENST00000513818 HCG22E2RYF7 251 aa5.08□□□□□ -1.6
TOPBP1-209ENST00000513818 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
TOPBP1-209ENST00000513818 A0A0U1RQV1 116 aa5.07□□□□□ -1.6
TOPBP1-209ENST00000513818 J3QR89 54 aa5.05□□□□□ -1.6
TOPBP1-209ENST00000513818 HIST1H4AP62805 103 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-209ENST00000513818 ATP5EP2Q5VTU8 51 aa5.05□□□□□ -1.6
TOPBP1-209ENST00000513818 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
TOPBP1-209ENST00000513818 A0A087WVE0 104 aa5.03□□□□□ -1.6
TOPBP1-209ENST00000513818 Q5W150 140 aa5.03□□□□□ -1.6
TOPBP1-209ENST00000513818 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-209ENST00000513818 HRES1P13985 223 aa5.01□□□□□ -1.61
TOPBP1-209ENST00000513818 COX6B2Q6YFQ2 88 aa5.01□□□□□ -1.61
TOPBP1-209ENST00000513818 PRO0628Q9UI54 55 aa5.01□□□□□ -1.61
TOPBP1-209ENST00000513818 SPINK7P58062 85 aa5□□□□□ -1.61
TOPBP1-209ENST00000513818 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
TOPBP1-209ENST00000513818 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
TOPBP1-209ENST00000513818 K7ERU9 68 aa4.97□□□□□ -1.61
TOPBP1-209ENST00000513818 PSPHP1O15172 72 aa4.97□□□□□ -1.61
TOPBP1-209ENST00000513818 MT1HP80294 61 aa4.97□□□□□ -1.61
TOPBP1-209ENST00000513818 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
TOPBP1-209ENST00000513818 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms