RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TMEM256-PLSCR3K7ERE1 68 aa4.76□□□□□ -1.65
TCOF1-212ENST00000513538 FAM236CP0DP71 79 aa4.76□□□□□ -1.65
TCOF1-212ENST00000513538 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
TCOF1-212ENST00000513538 ORMDL1Q9P0S3 153 aa4.76□□□□□ -1.65
TCOF1-212ENST00000513538 TRBV7-4A0A0J9YYF1 115 aa4.75□□□□□ -1.65
TCOF1-212ENST00000513538 ANKRD29Q8N6D5 301 aa4.75□□□□□ -1.65
TCOF1-212ENST00000513538 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
TCOF1-212ENST00000513538 TRACP01848 142 aa4.73□□□□□ -1.65
TCOF1-212ENST00000513538 LINC00472Q9H8W2 130 aa4.73□□□□□ -1.65
TCOF1-212ENST00000513538 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
TCOF1-212ENST00000513538 SCGB1C2P0DMR2 95 aa4.71□□□□□ -1.66
TCOF1-212ENST00000513538 LINC00313P59037 77 aa4.71□□□□□ -1.66
TCOF1-212ENST00000513538 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
TCOF1-212ENST00000513538 CCKP06307 115 aa4.7□□□□□ -1.66
TCOF1-212ENST00000513538 SIGMAR1Q99720 223 aa4.7□□□□□ -1.66
TCOF1-212ENST00000513538 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
TCOF1-212ENST00000513538 A0A1B0GV72 72 aa4.69□□□□□ -1.66
TCOF1-212ENST00000513538 IGKV4-1P06312 121 aa4.69□□□□□ -1.66
TCOF1-212ENST00000513538 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
TCOF1-212ENST00000513538 DEFB116Q30KQ4 102 aa4.68□□□□□ -1.66
TCOF1-212ENST00000513538 RBM3P98179 157 aaKnown RBP4.67□□□□□ -1.66
TCOF1-212ENST00000513538 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
TCOF1-212ENST00000513538 DSCR8Q96T75 97 aa4.67□□□□□ -1.66
TCOF1-212ENST00000513538 BAALC-AS2P0C853 105 aa4.66□□□□□ -1.66
TCOF1-212ENST00000513538 LINC00846Q9NV44 126 aa4.65□□□□□ -1.67
TCOF1-212ENST00000513538 VPS25Q9BRG1 176 aa4.64□□□□□ -1.67
TCOF1-212ENST00000513538 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
TCOF1-212ENST00000513538 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
TCOF1-212ENST00000513538 C9JAW5 83 aa4.63□□□□□ -1.67
TCOF1-212ENST00000513538 Q6ZQT0 140 aa4.63□□□□□ -1.67
TCOF1-212ENST00000513538 A0A1B0GVX0 72 aa4.62□□□□□ -1.67
TCOF1-212ENST00000513538 C8orf87E5RJ46 101 aa4.62□□□□□ -1.67
TCOF1-212ENST00000513538 J3KT08 172 aa4.62□□□□□ -1.67
TCOF1-212ENST00000513538 M0R143 59 aa4.62□□□□□ -1.67
TCOF1-212ENST00000513538 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
TCOF1-212ENST00000513538 A0A1B0GW54 56 aa4.61□□□□□ -1.67
TCOF1-212ENST00000513538 JMJD7-PLA2G4BH0Y9G9 81 aa4.61□□□□□ -1.67
TCOF1-212ENST00000513538 NDUFB1O75438 58 aa4.61□□□□□ -1.67
TCOF1-212ENST00000513538 SMIM6P0DI80 62 aa4.61□□□□□ -1.67
TCOF1-212ENST00000513538 ATXN8Q156A1 80 aa4.61□□□□□ -1.67
TCOF1-212ENST00000513538 Q8N9P0 234 aaPredicted RBP4.61□□□□□ -1.67
TCOF1-212ENST00000513538 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
TCOF1-212ENST00000513538 LOC110117498A0A087WWA1 95 aa4.6□□□□□ -1.67
TCOF1-212ENST00000513538 PDE6GP18545 87 aa4.6□□□□□ -1.67
TCOF1-212ENST00000513538 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
TCOF1-212ENST00000513538 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
TCOF1-212ENST00000513538 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
TCOF1-212ENST00000513538 A8MWP4 228 aa4.58□□□□□ -1.68
TCOF1-212ENST00000513538 SPINK7P58062 85 aa4.58□□□□□ -1.68
TCOF1-212ENST00000513538 LYRM7Q5U5X0 104 aa4.58□□□□□ -1.68
TCOF1-212ENST00000513538 MTURNQ8N3F0 131 aa4.58□□□□□ -1.68
TCOF1-212ENST00000513538 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
TCOF1-212ENST00000513538 ZCCHC13Q8WW36 166 aaKnown RBP4.57□□□□□ -1.68
TCOF1-212ENST00000513538 IGKV3D-7A0A0C4DH55 119 aa4.55□□□□□ -1.68
TCOF1-212ENST00000513538 LOC105371267A0A1B0GV96 52 aa4.55□□□□□ -1.68
TCOF1-212ENST00000513538 C14orf132Q9NPU4 83 aa4.55□□□□□ -1.68
TCOF1-212ENST00000513538 C8orf17Q9NRJ1 99 aa4.55□□□□□ -1.68
TCOF1-212ENST00000513538 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
TCOF1-212ENST00000513538 TSTD3H0UI37 97 aa4.53□□□□□ -1.68
TCOF1-212ENST00000513538 TAX1BP3O14907 124 aa4.52□□□□□ -1.69
TCOF1-212ENST00000513538 NREPQ16612 68 aa4.52□□□□□ -1.69
TCOF1-212ENST00000513538 PRR15Q8IV56 129 aa4.51□□□□□ -1.69
TCOF1-212ENST00000513538 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
TCOF1-212ENST00000513538 H3BT86 120 aa4.5□□□□□ -1.69
TCOF1-212ENST00000513538 BATFQ16520 125 aa4.5□□□□□ -1.69
TCOF1-212ENST00000513538 A0A1W2PPM0 123 aa4.49□□□□□ -1.69
TCOF1-212ENST00000513538 Q6ZVQ6 151 aa4.49□□□□□ -1.69
TCOF1-212ENST00000513538 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
TCOF1-212ENST00000513538 MRPL34Q9BQ48 92 aaKnown RBP4.47□□□□□ -1.69
TCOF1-212ENST00000513538 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
TCOF1-212ENST00000513538 K7EQZ3 153 aa4.46□□□□□ -1.7
TCOF1-212ENST00000513538 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
TCOF1-212ENST00000513538 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
TCOF1-212ENST00000513538 NEBP20929 6669 aa4.43□□□□□ -1.7
TCOF1-212ENST00000513538 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
TCOF1-212ENST00000513538 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
TCOF1-212ENST00000513538 BPY2O14599 106 aa4.42□□□□□ -1.7
TCOF1-212ENST00000513538 NDUFS5O43920 106 aa4.42□□□□□ -1.7
TCOF1-212ENST00000513538 MT1BP07438 61 aa4.42□□□□□ -1.7
TCOF1-212ENST00000513538 Q5W150 140 aa4.41□□□□□ -1.7
TCOF1-212ENST00000513538 SPCS1Q9Y6A9 102 aa4.41□□□□□ -1.7
TCOF1-212ENST00000513538 A6NN06 94 aa4.4□□□□□ -1.71
TCOF1-212ENST00000513538 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
TCOF1-212ENST00000513538 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
TCOF1-212ENST00000513538 Q8N9L7 120 aa4.38□□□□□ -1.71
TCOF1-212ENST00000513538 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
TCOF1-212ENST00000513538 K7EP34 96 aa4.35□□□□□ -1.71
TCOF1-212ENST00000513538 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
TCOF1-212ENST00000513538 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
TCOF1-212ENST00000513538 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
TCOF1-212ENST00000513538 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
TCOF1-212ENST00000513538 IGKV2-30P06310 120 aa4.34□□□□□ -1.71
TCOF1-212ENST00000513538 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
TCOF1-212ENST00000513538 C7orf65Q6ZTY9 151 aa4.34□□□□□ -1.71
TCOF1-212ENST00000513538 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
TCOF1-212ENST00000513538 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
TCOF1-212ENST00000513538 CXCL6P80162 114 aa4.33□□□□□ -1.72
TCOF1-212ENST00000513538 Q5VV11 94 aa4.32□□□□□ -1.72
TCOF1-212ENST00000513538 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
TCOF1-212ENST00000513538 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms