RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
CCL28-203ENST00000513525 CXCL6P80162 114 aa5.83□□□□□ -1.48
CCL28-203ENST00000513525 SMIM29Q86T20 159 aa5.83□□□□□ -1.48
CCL28-203ENST00000513525 KRTAP13-1Q8IUC0 172 aa5.82□□□□□ -1.48
CCL28-203ENST00000513525 C3orf22Q8N5N4 141 aa5.81□□□□□ -1.48
CCL28-203ENST00000513525 Q8NBF4 154 aa5.81□□□□□ -1.48
CCL28-203ENST00000513525 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
CCL28-203ENST00000513525 A0A087X002 238 aa5.79□□□□□ -1.48
CCL28-203ENST00000513525 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
CCL28-203ENST00000513525 ATOX1O00244 68 aa5.79□□□□□ -1.48
CCL28-203ENST00000513525 NREPQ16612 68 aa5.79□□□□□ -1.48
CCL28-203ENST00000513525 CRYGAP11844 174 aa5.78□□□□□ -1.48
CCL28-203ENST00000513525 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
CCL28-203ENST00000513525 ZNF706Q9Y5V0 76 aaPredicted RBP5.77□□□□□ -1.49
CCL28-203ENST00000513525 A0A087WVE0 104 aa5.76□□□□□ -1.49
CCL28-203ENST00000513525 PRR4Q16378 134 aa5.76□□□□□ -1.49
CCL28-203ENST00000513525 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
CCL28-203ENST00000513525 IGFL1Q6UW32 110 aa5.76□□□□□ -1.49
CCL28-203ENST00000513525 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
CCL28-203ENST00000513525 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
CCL28-203ENST00000513525 BPY2O14599 106 aa5.74□□□□□ -1.49
CCL28-203ENST00000513525 ANAPC11Q9NYG5 84 aa5.74□□□□□ -1.49
CCL28-203ENST00000513525 UQCRQO14949 82 aa5.72□□□□□ -1.49
CCL28-203ENST00000513525 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
CCL28-203ENST00000513525 COX7CP15954 63 aa5.71□□□□□ -1.5
CCL28-203ENST00000513525 SMIM20Q8N5G0 67 aa5.71□□□□□ -1.5
CCL28-203ENST00000513525 SERP2Q8N6R1 65 aa5.71□□□□□ -1.5
CCL28-203ENST00000513525 MUC2Q02817 5179 aa5.71□□□□□ -1.5
CCL28-203ENST00000513525 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
CCL28-203ENST00000513525 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
CCL28-203ENST00000513525 A0A087WSZ3 146 aa5.68□□□□□ -1.5
CCL28-203ENST00000513525 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
CCL28-203ENST00000513525 A0A0G2JQZ4 141 aa5.66□□□□□ -1.5
CCL28-203ENST00000513525 DSCR10P59022 87 aa5.65□□□□□ -1.5
CCL28-203ENST00000513525 TPRXLQ17RH7 258 aa5.65□□□□□ -1.5
CCL28-203ENST00000513525 C9orf153Q5TBE3 101 aa5.65□□□□□ -1.5
CCL28-203ENST00000513525 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
CCL28-203ENST00000513525 IGLV9-49A0A0B4J1Y8 123 aa5.64□□□□□ -1.51
CCL28-203ENST00000513525 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
CCL28-203ENST00000513525 Q8N9L7 120 aa5.64□□□□□ -1.51
CCL28-203ENST00000513525 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
CCL28-203ENST00000513525 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
CCL28-203ENST00000513525 A0A0U1RQV1 116 aa5.63□□□□□ -1.51
CCL28-203ENST00000513525 J3KT08 172 aa5.63□□□□□ -1.51
CCL28-203ENST00000513525 SS18L2Q9UHA2 77 aa5.63□□□□□ -1.51
CCL28-203ENST00000513525 LINC00472Q9H8W2 130 aa5.62□□□□□ -1.51
CCL28-203ENST00000513525 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
CCL28-203ENST00000513525 MOBPQ13875 183 aa5.61□□□□□ -1.51
CCL28-203ENST00000513525 K7EQZ3 153 aa5.6□□□□□ -1.51
CCL28-203ENST00000513525 CD164Q04900 197 aa5.59□□□□□ -1.51
CCL28-203ENST00000513525 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
CCL28-203ENST00000513525 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
CCL28-203ENST00000513525 A8MWP4 228 aa5.58□□□□□ -1.52
CCL28-203ENST00000513525 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
CCL28-203ENST00000513525 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
CCL28-203ENST00000513525 SPINK1P00995 79 aa5.58□□□□□ -1.52
CCL28-203ENST00000513525 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
CCL28-203ENST00000513525 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
CCL28-203ENST00000513525 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
CCL28-203ENST00000513525 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
CCL28-203ENST00000513525 NDUFB1O75438 58 aa5.55□□□□□ -1.52
CCL28-203ENST00000513525 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
CCL28-203ENST00000513525 C20orf197Q8N268 126 aa5.55□□□□□ -1.52
CCL28-203ENST00000513525 Q96NJ1 140 aa5.55□□□□□ -1.52
CCL28-203ENST00000513525 TMEM258P61165 79 aa5.53□□□□□ -1.52
CCL28-203ENST00000513525 KRTAP13-3Q3SY46 172 aa5.53□□□□□ -1.52
CCL28-203ENST00000513525 HRCT1Q6UXD1 115 aa5.53□□□□□ -1.52
CCL28-203ENST00000513525 NDUFC1O43677 76 aa5.53□□□□□ -1.52
CCL28-203ENST00000513525 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CCL28-203ENST00000513525 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
CCL28-203ENST00000513525 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
CCL28-203ENST00000513525 CYSTM1Q9H1C7 97 aa5.52□□□□□ -1.53
CCL28-203ENST00000513525 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
CCL28-203ENST00000513525 Q5XG85 94 aa5.5□□□□□ -1.53
CCL28-203ENST00000513525 WFDC13Q8IUB5 93 aa5.5□□□□□ -1.53
CCL28-203ENST00000513525 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
CCL28-203ENST00000513525 C5orf47Q569G3 176 aa5.49□□□□□ -1.53
CCL28-203ENST00000513525 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
CCL28-203ENST00000513525 H7BZZ5 65 aa5.48□□□□□ -1.53
CCL28-203ENST00000513525 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
CCL28-203ENST00000513525 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
CCL28-203ENST00000513525 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
CCL28-203ENST00000513525 LIMD2Q9BT23 127 aa5.46□□□□□ -1.54
CCL28-203ENST00000513525 H3BPC8 53 aa5.44□□□□□ -1.54
CCL28-203ENST00000513525 MP68P56378 58 aa5.44□□□□□ -1.54
CCL28-203ENST00000513525 ATP5EP56381 51 aaPredicted RBP5.44□□□□□ -1.54
CCL28-203ENST00000513525 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
CCL28-203ENST00000513525 TP53AIP1Q9HCN2 124 aa5.44□□□□□ -1.54
CCL28-203ENST00000513525 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
CCL28-203ENST00000513525 FAM236DA0A1B0GTK5 79 aa5.43□□□□□ -1.54
CCL28-203ENST00000513525 C8orf87E5RJ46 101 aa5.43□□□□□ -1.54
CCL28-203ENST00000513525 FAM236CP0DP71 79 aa5.43□□□□□ -1.54
CCL28-203ENST00000513525 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
CCL28-203ENST00000513525 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
CCL28-203ENST00000513525 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
CCL28-203ENST00000513525 C1orf195Q5TG92 126 aa5.41□□□□□ -1.54
CCL28-203ENST00000513525 MRPL34Q9BQ48 92 aaKnown RBP5.41□□□□□ -1.54
CCL28-203ENST00000513525 H0Y9P7 68 aa5.39□□□□□ -1.55
CCL28-203ENST00000513525 TRAV22A0A0B4J277 110 aa5.38□□□□□ -1.55
CCL28-203ENST00000513525 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms