RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 ITPR2Q14571 2701 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 EPPK1P58107 5090 aaKnown RBP0.77□□□□□ -2.29
LINC01088-210ENST00000513153 COL12A1Q99715 3063 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 VPS13AQ96RL7 3174 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 A0A0D9SG42 100 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 LINC01549A6NIU2 74 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 K7EMI3 77 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 CD52P31358 61 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 SERF2P84101 59 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 WNK1Q9H4A3 2382 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 ACANP16112 2415 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 MGAM2Q2M2H8 2515 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 DMXL2Q8TDJ6 3036 aa0.77□□□□□ -2.29
LINC01088-210ENST00000513153 RYR1P21817 5038 aa0.76□□□□□ -2.29
LINC01088-210ENST00000513153 HERC2O95714 4834 aa0.76□□□□□ -2.29
LINC01088-210ENST00000513153 SMIM27A0A1W2PRY6 76 aa0.76□□□□□ -2.29
LINC01088-210ENST00000513153 CDKN2A-AS1Q9UH64 79 aa0.76□□□□□ -2.29
LINC01088-210ENST00000513153 APLNQ9ULZ1 77 aa0.76□□□□□ -2.29
LINC01088-210ENST00000513153 RYR2Q92736 4967 aa0.76□□□□□ -2.29
LINC01088-210ENST00000513153 AKAP9Q99996 3911 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 VPS13CQ709C8 3753 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 CADP27708 2225 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 I3L2K1 104 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 K7EQZ3 153 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 SPINK4O60575 86 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 MRPL34Q9BQ48 92 aaKnown RBP0.75□□□□□ -2.29
LINC01088-210ENST00000513153 AKAP13Q12802 2813 aa0.75□□□□□ -2.29
LINC01088-210ENST00000513153 KNTC1P50748 2209 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 CSMD2Q7Z408 3487 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 DNAH1Q9P2D7 4330 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 BOD1L1Q8NFC6 3051 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 FRYLO94915 3013 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 PDZD2O15018 2839 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 LINC01546A6NGU7 62 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 COX6B2Q6YFQ2 88 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 PRKDCP78527 4128 aaKnown RBP0.74□□□□□ -2.29
LINC01088-210ENST00000513153 ADGRG4Q8IZF6 3080 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 LRBAP50851 2863 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 KIAA1109Q2LD37 5005 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
LINC01088-210ENST00000513153 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
LINC01088-210ENST00000513153 SONP18583 2426 aaKnown RBP0.73□□□□□ -2.29
LINC01088-210ENST00000513153 LCE6AA0A183 80 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 ETDCA0A1B0GVM5 59 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 IGIPA6NJ69 53 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 PLNP26678 52 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 DEFB105AQ8NG35 78 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 CENPEQ02224 2701 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
LINC01088-210ENST00000513153 NBEAQ8NFP9 2946 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 ATMQ13315 3056 aa0.73□□□□□ -2.29
LINC01088-210ENST00000513153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.72□□□□□ -2.29
LINC01088-210ENST00000513153 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
LINC01088-210ENST00000513153 M0R1W7 72 aa0.72□□□□□ -2.29
LINC01088-210ENST00000513153 KRTAP10-4P60372 401 aaPredicted RBP0.72□□□□□ -2.29
LINC01088-210ENST00000513153 SPINK6Q6UWN8 80 aa0.72□□□□□ -2.29
LINC01088-210ENST00000513153 U3KQA8 63 aa0.72□□□□□ -2.29
LINC01088-210ENST00000513153 CELSR2Q9HCU4 2923 aa0.72□□□□□ -2.29
LINC01088-210ENST00000513153 APCP25054 2843 aa0.72□□□□□ -2.29
LINC01088-210ENST00000513153 ANK3Q12955 4377 aaKnown RBP0.72□□□□□ -2.29
LINC01088-210ENST00000513153 CUBNO60494 3623 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 MGAQ8IWI9 3026 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 SPRR1BP22528 89 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 DEFB109BQ30KR1 87 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 Q5VSD8 79 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 RPS27LQ71UM5 84 aaKnown RBP0.71□□□□□ -2.3
LINC01088-210ENST00000513153 TIMM8BQ9Y5J9 83 aaPredicted RBP0.71□□□□□ -2.3
LINC01088-210ENST00000513153 SVEP1Q4LDE5 3571 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 NIPBLQ6KC79 2804 aaeCLIP0.71□□□□□ -2.3
LINC01088-210ENST00000513153 PKD1L1Q8TDX9 2849 aa0.71□□□□□ -2.3
LINC01088-210ENST00000513153 TRRAPQ9Y4A5 3859 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 ABCA13Q86UQ4 5058 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 ROS1P08922 2347 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 DEFB131BA0A096LNP1 70 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 NDUFA3O95167 84 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 SPINK1P00995 79 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 SPRR1AP35321 89 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 LINC00158P58513 81 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 TFF3Q07654 80 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 SACSQ9NZJ4 4579 aa0.7□□□□□ -2.3
LINC01088-210ENST00000513153 DMBT1Q9UGM3 2413 aaPredicted RBP0.7□□□□□ -2.3
LINC01088-210ENST00000513153 MUC2Q02817 5179 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 CELSR1Q9NYQ6 3014 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 DEFB114Q30KQ6 69 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 H1FX-AS1Q4G0G2 97 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 SMR3AQ99954 134 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 TTTY10Q9BZA0 68 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 TMEM167BQ9NRX6 74 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 LAMA1P25391 3075 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 CACNA1CQ13936 2221 aa0.69□□□□□ -2.3
LINC01088-210ENST00000513153 DNAH11Q96DT5 4516 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
LINC01088-210ENST00000513153 HERC1Q15751 4861 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 IAPPP10997 89 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 KLK9Q2XQG4 91 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 LINC01590Q5TEZ4 76 aa0.68□□□□□ -2.3
LINC01088-210ENST00000513153 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms