RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
MATR3-221ENST00000513121 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
MATR3-221ENST00000513121 C9JAW5 83 aa9.63□□□□□ -0.87
MATR3-221ENST00000513121 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
MATR3-221ENST00000513121 HRES1P13985 223 aa9.62□□□□□ -0.87
MATR3-221ENST00000513121 Q6ZQT0 140 aa9.62□□□□□ -0.87
MATR3-221ENST00000513121 M0R143 59 aa9.61□□□□□ -0.87
MATR3-221ENST00000513121 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
MATR3-221ENST00000513121 MPLKIPQ8TAP9 179 aa9.61□□□□□ -0.87
MATR3-221ENST00000513121 C8orf87E5RJ46 101 aa9.6□□□□□ -0.87
MATR3-221ENST00000513121 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
MATR3-221ENST00000513121 J3KT08 172 aa9.54□□□□□ -0.88
MATR3-221ENST00000513121 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
MATR3-221ENST00000513121 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
MATR3-221ENST00000513121 JMJD7-PLA2G4BH0Y9G9 81 aa9.53□□□□□ -0.88
MATR3-221ENST00000513121 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
MATR3-221ENST00000513121 C21orf62-AS1Q17RA5 79 aa9.52□□□□□ -0.89
MATR3-221ENST00000513121 USH2AO75445 5202 aa9.51□□□□□ -0.89
MATR3-221ENST00000513121 ZCCHC13Q8WW36 166 aaKnown RBP9.51□□□□□ -0.89
MATR3-221ENST00000513121 C14orf132Q9NPU4 83 aa9.51□□□□□ -0.89
MATR3-221ENST00000513121 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
MATR3-221ENST00000513121 IGKV3D-7A0A0C4DH55 119 aa9.48□□□□□ -0.89
MATR3-221ENST00000513121 Q8N9P0 234 aaPredicted RBP9.48□□□□□ -0.89
MATR3-221ENST00000513121 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
MATR3-221ENST00000513121 A8MWP4 228 aa9.47□□□□□ -0.89
MATR3-221ENST00000513121 NDUFB1O75438 58 aa9.47□□□□□ -0.89
MATR3-221ENST00000513121 MT2AP02795 61 aa9.47□□□□□ -0.89
MATR3-221ENST00000513121 BATFQ16520 125 aa9.47□□□□□ -0.89
MATR3-221ENST00000513121 C8orf17Q9NRJ1 99 aa9.47□□□□□ -0.89
MATR3-221ENST00000513121 A0A1B0GW54 56 aa9.45□□□□□ -0.9
MATR3-221ENST00000513121 PDE6GP18545 87 aa9.45□□□□□ -0.9
MATR3-221ENST00000513121 SPINK7P58062 85 aa9.45□□□□□ -0.9
MATR3-221ENST00000513121 TSTD3H0UI37 97 aa9.41□□□□□ -0.9
MATR3-221ENST00000513121 MT1FP04733 61 aa9.41□□□□□ -0.9
MATR3-221ENST00000513121 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
MATR3-221ENST00000513121 LOC105371267A0A1B0GV96 52 aa9.39□□□□□ -0.91
MATR3-221ENST00000513121 TAX1BP3O14907 124 aa9.39□□□□□ -0.91
MATR3-221ENST00000513121 PRR15Q8IV56 129 aa9.39□□□□□ -0.91
MATR3-221ENST00000513121 C9orf118A6NHY6 69 aa9.38□□□□□ -0.91
MATR3-221ENST00000513121 NREPQ16612 68 aa9.38□□□□□ -0.91
MATR3-221ENST00000513121 Q6ZVQ6 151 aa9.38□□□□□ -0.91
MATR3-221ENST00000513121 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
MATR3-221ENST00000513121 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
MATR3-221ENST00000513121 A0A1W2PPM0 123 aa9.34□□□□□ -0.91
MATR3-221ENST00000513121 H3BT86 120 aa9.32□□□□□ -0.92
MATR3-221ENST00000513121 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
MATR3-221ENST00000513121 K7EQZ3 153 aa9.3□□□□□ -0.92
MATR3-221ENST00000513121 WFDC13Q8IUB5 93 aa9.3□□□□□ -0.92
MATR3-221ENST00000513121 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
MATR3-221ENST00000513121 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
MATR3-221ENST00000513121 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
MATR3-221ENST00000513121 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
MATR3-221ENST00000513121 BPY2O14599 106 aa9.2□□□□□ -0.94
MATR3-221ENST00000513121 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
MATR3-221ENST00000513121 FCGBPQ9Y6R7 5405 aaPredicted RBP9.2□□□□□ -0.94
MATR3-221ENST00000513121 NDUFS5O43920 106 aa9.19□□□□□ -0.94
MATR3-221ENST00000513121 Q5W150 140 aa9.19□□□□□ -0.94
MATR3-221ENST00000513121 Q8N9L7 120 aa9.19□□□□□ -0.94
MATR3-221ENST00000513121 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
MATR3-221ENST00000513121 KRTAP19-1Q8IUB9 90 aa9.15□□□□□ -0.94
MATR3-221ENST00000513121 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
MATR3-221ENST00000513121 PRO0461Q9UI25 63 aa9.12□□□□□ -0.95
MATR3-221ENST00000513121 IGKV2D-30A0A075B6S6 120 aa9.11□□□□□ -0.95
MATR3-221ENST00000513121 IGKV2-30P06310 120 aa9.11□□□□□ -0.95
MATR3-221ENST00000513121 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
MATR3-221ENST00000513121 CASC2Q6XLA1 102 aa9.08□□□□□ -0.96
MATR3-221ENST00000513121 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
MATR3-221ENST00000513121 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
MATR3-221ENST00000513121 COL5A1-AS1Q5SY13 56 aa9.06□□□□□ -0.96
MATR3-221ENST00000513121 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
MATR3-221ENST00000513121 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
MATR3-221ENST00000513121 K7EP34 96 aa9.03□□□□□ -0.96
MATR3-221ENST00000513121 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
MATR3-221ENST00000513121 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
MATR3-221ENST00000513121 CXCL6P80162 114 aa8.97□□□□□ -0.97
MATR3-221ENST00000513121 KRTAP19-6Q3LI70 58 aa8.94□□□□□ -0.98
MATR3-221ENST00000513121 MACF1Q9UPN3 7388 aaKnown RBP8.93□□□□□ -0.98
MATR3-221ENST00000513121 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
MATR3-221ENST00000513121 SYNE2Q8WXH0 6885 aaKnown RBP8.9□□□□□ -0.98
MATR3-221ENST00000513121 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
MATR3-221ENST00000513121 GTF2H5Q6ZYL4 71 aa8.85□□□□□ -0.99
MATR3-221ENST00000513121 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
MATR3-221ENST00000513121 F8W1H4 67 aa8.83□□□□□ -1
MATR3-221ENST00000513121 C5orf47Q569G3 176 aa8.82□□□□□ -1
MATR3-221ENST00000513121 C1orf64Q8NEQ6 169 aa8.78□□□□□ -1
MATR3-221ENST00000513121 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
MATR3-221ENST00000513121 S4R3F8 94 aa8.74□□□□□ -1.01
MATR3-221ENST00000513121 LCA10Q71F78 164 aa8.73□□□□□ -1.01
MATR3-221ENST00000513121 LCE3BQ5TA77 95 aa8.72□□□□□ -1.01
MATR3-221ENST00000513121 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
MATR3-221ENST00000513121 FAM236AA0A1B0GUQ0 79 aa8.67□□□□□ -1.02
MATR3-221ENST00000513121 FAM236BA0A1B0GV22 79 aa8.67□□□□□ -1.02
MATR3-221ENST00000513121 CYP4F30PQ9H0H9 118 aa8.67□□□□□ -1.02
MATR3-221ENST00000513121 A0A087WVE0 104 aa8.63□□□□□ -1.03
MATR3-221ENST00000513121 KRTAP4-12Q9BQ66 201 aa8.63□□□□□ -1.03
MATR3-221ENST00000513121 MT1BP07438 61 aa8.62□□□□□ -1.03
MATR3-221ENST00000513121 ACYP1P07311 99 aa8.59□□□□□ -1.03
MATR3-221ENST00000513121 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
MATR3-221ENST00000513121 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
MATR3-221ENST00000513121 KRTAP19-8Q3LI54 63 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms