RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 LRBAP50851 2863 aa8.95□□□□□ -0.98
ARHGEF28-212ENST00000513042 VCANP13611 3396 aa8.93□□□□□ -0.98
ARHGEF28-212ENST00000513042 MAP1AP78559 2803 aaPredicted RBP8.93□□□□□ -0.98
ARHGEF28-212ENST00000513042 BAHCC1Q9P281 2608 aa8.93□□□□□ -0.98
ARHGEF28-212ENST00000513042 APCP25054 2843 aa8.92□□□□□ -0.98
ARHGEF28-212ENST00000513042 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
ARHGEF28-212ENST00000513042 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
ARHGEF28-212ENST00000513042 KRTAP21-3Q3LHN1 58 aa8.91□□□□□ -0.98
ARHGEF28-212ENST00000513042 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
ARHGEF28-212ENST00000513042 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
ARHGEF28-212ENST00000513042 CFAP47Q6ZTR5 3102 aa8.84□□□□□ -0.99
ARHGEF28-212ENST00000513042 LAMA1P25391 3075 aa8.84□□□□□ -0.99
ARHGEF28-212ENST00000513042 CRYBG3Q68DQ2 2970 aa8.83□□□□□ -1
ARHGEF28-212ENST00000513042 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
ARHGEF28-212ENST00000513042 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
ARHGEF28-212ENST00000513042 UTP20O75691 2785 aaKnown RBP8.81□□□□□ -1
ARHGEF28-212ENST00000513042 ITPR1Q14643 2758 aa8.81□□□□□ -1
ARHGEF28-212ENST00000513042 HIVEP1P15822 2718 aa8.8□□□□□ -1
ARHGEF28-212ENST00000513042 REV3LO60673 3130 aa8.8□□□□□ -1
ARHGEF28-212ENST00000513042 ATMQ13315 3056 aa8.77□□□□□ -1.01
ARHGEF28-212ENST00000513042 DMXL2Q8TDJ6 3036 aa8.77□□□□□ -1.01
ARHGEF28-212ENST00000513042 ASH1LQ9NR48 2969 aaKnown RBP8.75□□□□□ -1.01
ARHGEF28-212ENST00000513042 TACC2O95359 2948 aa8.75□□□□□ -1.01
ARHGEF28-212ENST00000513042 SPTBN5Q9NRC6 3674 aaKnown RBP8.72□□□□□ -1.01
ARHGEF28-212ENST00000513042 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
ARHGEF28-212ENST00000513042 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
ARHGEF28-212ENST00000513042 COL12A1Q99715 3063 aa8.67□□□□□ -1.02
ARHGEF28-212ENST00000513042 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.02
ARHGEF28-212ENST00000513042 SPEGQ15772 3267 aa8.63□□□□□ -1.03
ARHGEF28-212ENST00000513042 NBEAQ8NFP9 2946 aa8.62□□□□□ -1.03
ARHGEF28-212ENST00000513042 USP34Q70CQ2 3546 aa8.61□□□□□ -1.03
ARHGEF28-212ENST00000513042 FRYLO94915 3013 aa8.58□□□□□ -1.04
ARHGEF28-212ENST00000513042 ZZEF1O43149 2961 aa8.58□□□□□ -1.04
ARHGEF28-212ENST00000513042 EYSQ5T1H1 3165 aa8.55□□□□□ -1.04
ARHGEF28-212ENST00000513042 CELSR2Q9HCU4 2923 aa8.44□□□□□ -1.06
ARHGEF28-212ENST00000513042 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
ARHGEF28-212ENST00000513042 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
ARHGEF28-212ENST00000513042 FLNCQ14315 2725 aa8.4□□□□□ -1.06
ARHGEF28-212ENST00000513042 TENM4Q6N022 2769 aa8.36□□□□□ -1.07
ARHGEF28-212ENST00000513042 DCHS2Q6V1P9 2916 aa8.34□□□□□ -1.07
ARHGEF28-212ENST00000513042 TNRC18O15417 2968 aaPredicted RBP8.33□□□□□ -1.08
ARHGEF28-212ENST00000513042 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
ARHGEF28-212ENST00000513042 HRNRQ86YZ3 2850 aaPredicted RBP8.3□□□□□ -1.08
ARHGEF28-212ENST00000513042 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
ARHGEF28-212ENST00000513042 MYO15AQ9UKN7 3530 aa8.27□□□□□ -1.09
ARHGEF28-212ENST00000513042 NIPBLQ6KC79 2804 aaeCLIP8.25□□□□□ -1.09
ARHGEF28-212ENST00000513042 TGP01266 2768 aa8.24□□□□□ -1.09
ARHGEF28-212ENST00000513042 ASPMQ8IZT6 3477 aa8.24□□□□□ -1.09
ARHGEF28-212ENST00000513042 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
ARHGEF28-212ENST00000513042 WDFY3Q8IZQ1 3526 aa8.2□□□□□ -1.1
ARHGEF28-212ENST00000513042 DMXL1Q9Y485 3027 aa8.19□□□□□ -1.1
ARHGEF28-212ENST00000513042 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
ARHGEF28-212ENST00000513042 CELSR1Q9NYQ6 3014 aa8.14□□□□□ -1.11
ARHGEF28-212ENST00000513042 DCHS1Q96JQ0 3298 aa8.14□□□□□ -1.11
ARHGEF28-212ENST00000513042 TENM1Q9UKZ4 2725 aa8.13□□□□□ -1.11
ARHGEF28-212ENST00000513042 FBN2P35556 2912 aa8.13□□□□□ -1.11
ARHGEF28-212ENST00000513042 LOC400499M0QZD8 3231 aa8.13□□□□□ -1.11
ARHGEF28-212ENST00000513042 NF1P21359 2839 aa8.09□□□□□ -1.11
ARHGEF28-212ENST00000513042 NBPF19A0A087WUL8 3843 aa8.05□□□□□ -1.12
ARHGEF28-212ENST00000513042 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
ARHGEF28-212ENST00000513042 ZFHX4Q86UP3 3567 aa8.01□□□□□ -1.13
ARHGEF28-212ENST00000513042 CSMD1Q96PZ7 3565 aa8.01□□□□□ -1.13
ARHGEF28-212ENST00000513042 RELNP78509 3460 aa8□□□□□ -1.13
ARHGEF28-212ENST00000513042 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
ARHGEF28-212ENST00000513042 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
ARHGEF28-212ENST00000513042 ANK3Q12955 4377 aaKnown RBP7.84□□□□□ -1.15
ARHGEF28-212ENST00000513042 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
ARHGEF28-212ENST00000513042 LAMA5O15230 3695 aa7.83□□□□□ -1.16
ARHGEF28-212ENST00000513042 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
ARHGEF28-212ENST00000513042 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
ARHGEF28-212ENST00000513042 VWFP04275 2813 aa7.73□□□□□ -1.17
ARHGEF28-212ENST00000513042 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
ARHGEF28-212ENST00000513042 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
ARHGEF28-212ENST00000513042 PKD1L1Q8TDX9 2849 aa7.72□□□□□ -1.17
ARHGEF28-212ENST00000513042 SMG1Q96Q15 3661 aaKnown RBP7.71□□□□□ -1.17
ARHGEF28-212ENST00000513042 INE1O15225 51 aa7.68□□□□□ -1.18
ARHGEF28-212ENST00000513042 PDZD2O15018 2839 aa7.65□□□□□ -1.19
ARHGEF28-212ENST00000513042 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
ARHGEF28-212ENST00000513042 HUWE1Q7Z6Z7 4374 aaKnown RBP7.57□□□□□ -1.2
ARHGEF28-212ENST00000513042 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
ARHGEF28-212ENST00000513042 SVEP1Q4LDE5 3571 aa7.55□□□□□ -1.2
ARHGEF28-212ENST00000513042 KRTAP12-3P60328 96 aa7.54□□□□□ -1.2
ARHGEF28-212ENST00000513042 DMDP11532 3685 aa7.54□□□□□ -1.2
ARHGEF28-212ENST00000513042 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
ARHGEF28-212ENST00000513042 ALMS1Q8TCU4 4167 aa7.45□□□□□ -1.22
ARHGEF28-212ENST00000513042 ZFHX3Q15911 3703 aa7.45□□□□□ -1.22
ARHGEF28-212ENST00000513042 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
ARHGEF28-212ENST00000513042 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
ARHGEF28-212ENST00000513042 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
ARHGEF28-212ENST00000513042 FBN3Q75N90 2809 aa7.38□□□□□ -1.23
ARHGEF28-212ENST00000513042 CSMD2Q7Z408 3487 aa7.37□□□□□ -1.23
ARHGEF28-212ENST00000513042 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
ARHGEF28-212ENST00000513042 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
ARHGEF28-212ENST00000513042 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
ARHGEF28-212ENST00000513042 CUBNO60494 3623 aa7.29□□□□□ -1.24
ARHGEF28-212ENST00000513042 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
ARHGEF28-212ENST00000513042 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
ARHGEF28-212ENST00000513042 VPS13CQ709C8 3753 aa7.2□□□□□ -1.26
ARHGEF28-212ENST00000513042 KRTAP8-1Q8IUC2 63 aa7.19□□□□□ -1.26
ARHGEF28-212ENST00000513042 BSNQ9UPA5 3926 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms