RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
CPNE4-210ENST00000512332 V9GYY9 64 aa5.44□□□□□ -1.54
CPNE4-210ENST00000512332 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
CPNE4-210ENST00000512332 TGP01266 2768 aa5.44□□□□□ -1.54
CPNE4-210ENST00000512332 CIRBP-AS1Q8TBR5 109 aa5.44□□□□□ -1.54
CPNE4-210ENST00000512332 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
CPNE4-210ENST00000512332 FBN3Q75N90 2809 aa5.43□□□□□ -1.54
CPNE4-210ENST00000512332 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
CPNE4-210ENST00000512332 Q6ZSA8 131 aa5.42□□□□□ -1.54
CPNE4-210ENST00000512332 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
CPNE4-210ENST00000512332 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
CPNE4-210ENST00000512332 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
CPNE4-210ENST00000512332 A0A087X002 238 aa5.41□□□□□ -1.54
CPNE4-210ENST00000512332 NDUFS5O43920 106 aa5.41□□□□□ -1.54
CPNE4-210ENST00000512332 NOTCH2NLQ7Z3S9 236 aa5.41□□□□□ -1.54
CPNE4-210ENST00000512332 C8orf87E5RJ46 101 aa5.4□□□□□ -1.55
CPNE4-210ENST00000512332 BRK1Q8WUW1 75 aa5.4□□□□□ -1.55
CPNE4-210ENST00000512332 DNAH6Q9C0G6 4158 aa5.4□□□□□ -1.55
CPNE4-210ENST00000512332 FRAS1Q86XX4 4008 aa5.39□□□□□ -1.55
CPNE4-210ENST00000512332 LOC101927531A0A1B0GV80 90 aa5.38□□□□□ -1.55
CPNE4-210ENST00000512332 LIMD2Q9BT23 127 aa5.38□□□□□ -1.55
CPNE4-210ENST00000512332 PCOTHQ58A44 107 aa5.38□□□□□ -1.55
CPNE4-210ENST00000512332 SPINK6Q6UWN8 80 aa5.38□□□□□ -1.55
CPNE4-210ENST00000512332 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
CPNE4-210ENST00000512332 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
CPNE4-210ENST00000512332 KRTAP13-3Q3SY46 172 aa5.37□□□□□ -1.55
CPNE4-210ENST00000512332 COA5Q86WW8 74 aa5.37□□□□□ -1.55
CPNE4-210ENST00000512332 DNHD1Q96M86 4753 aa5.36□□□□□ -1.55
CPNE4-210ENST00000512332 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
CPNE4-210ENST00000512332 PSPHP1O15172 72 aa5.35□□□□□ -1.55
CPNE4-210ENST00000512332 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
CPNE4-210ENST00000512332 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
CPNE4-210ENST00000512332 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
CPNE4-210ENST00000512332 Q5W150 140 aa5.34□□□□□ -1.55
CPNE4-210ENST00000512332 A8MUN3 132 aa5.33□□□□□ -1.56
CPNE4-210ENST00000512332 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
CPNE4-210ENST00000512332 DNAH11Q96DT5 4516 aa5.33□□□□□ -1.56
CPNE4-210ENST00000512332 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
CPNE4-210ENST00000512332 LINC00313P59037 77 aa5.33□□□□□ -1.56
CPNE4-210ENST00000512332 Q5VV11 94 aa5.32□□□□□ -1.56
CPNE4-210ENST00000512332 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
CPNE4-210ENST00000512332 KRTAP21-3Q3LHN1 58 aa5.31□□□□□ -1.56
CPNE4-210ENST00000512332 FAM229AH3BQW9 127 aa5.31□□□□□ -1.56
CPNE4-210ENST00000512332 HRES1P13985 223 aa5.3□□□□□ -1.56
CPNE4-210ENST00000512332 J3QL48 77 aa5.29□□□□□ -1.56
CPNE4-210ENST00000512332 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
CPNE4-210ENST00000512332 Q75L30 129 aa5.28□□□□□ -1.56
CPNE4-210ENST00000512332 PKD1P98161 4303 aa5.27□□□□□ -1.57
CPNE4-210ENST00000512332 KRTAP16-1A8MUX0 517 aa5.27□□□□□ -1.57
CPNE4-210ENST00000512332 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
CPNE4-210ENST00000512332 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
CPNE4-210ENST00000512332 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
CPNE4-210ENST00000512332 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
CPNE4-210ENST00000512332 SPINK1P00995 79 aa5.25□□□□□ -1.57
CPNE4-210ENST00000512332 PLA2G1BP04054 148 aaKnown RBP5.25□□□□□ -1.57
CPNE4-210ENST00000512332 ACYP2P14621 99 aa5.25□□□□□ -1.57
CPNE4-210ENST00000512332 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
CPNE4-210ENST00000512332 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
CPNE4-210ENST00000512332 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
CPNE4-210ENST00000512332 SPAG11AQ6PDA7 123 aa5.24□□□□□ -1.57
CPNE4-210ENST00000512332 HYDINQ4G0P3 5121 aa5.23□□□□□ -1.57
CPNE4-210ENST00000512332 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
CPNE4-210ENST00000512332 TYMSOSQ8TAI1 123 aa5.23□□□□□ -1.57
CPNE4-210ENST00000512332 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
CPNE4-210ENST00000512332 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
CPNE4-210ENST00000512332 VPS13BQ7Z7G8 4022 aa5.2□□□□□ -1.58
CPNE4-210ENST00000512332 A6NED7 52 aa5.19□□□□□ -1.58
CPNE4-210ENST00000512332 LCA10Q71F78 164 aa5.17□□□□□ -1.58
CPNE4-210ENST00000512332 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
CPNE4-210ENST00000512332 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
CPNE4-210ENST00000512332 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CPNE4-210ENST00000512332 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
CPNE4-210ENST00000512332 RETNLBQ9BQ08 111 aa5.16□□□□□ -1.58
CPNE4-210ENST00000512332 A8MU10 97 aa5.16□□□□□ -1.58
CPNE4-210ENST00000512332 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
CPNE4-210ENST00000512332 IGKV2D-30A0A075B6S6 120 aa5.12□□□□□ -1.59
CPNE4-210ENST00000512332 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
CPNE4-210ENST00000512332 SPINK7P58062 85 aa5.11□□□□□ -1.59
CPNE4-210ENST00000512332 KRTAP10-4P60372 401 aaPredicted RBP5.11□□□□□ -1.59
CPNE4-210ENST00000512332 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
CPNE4-210ENST00000512332 C7orf65Q6ZTY9 151 aa5.09□□□□□ -1.59
CPNE4-210ENST00000512332 SACSQ9NZJ4 4579 aa5.09□□□□□ -1.59
CPNE4-210ENST00000512332 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
CPNE4-210ENST00000512332 SPTSSBQ8NFR3 76 aa5.08□□□□□ -1.6
CPNE4-210ENST00000512332 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
CPNE4-210ENST00000512332 A0A1B0GU69 56 aa5.07□□□□□ -1.6
CPNE4-210ENST00000512332 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
CPNE4-210ENST00000512332 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
CPNE4-210ENST00000512332 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
CPNE4-210ENST00000512332 A8MUU9 505 aa5.07□□□□□ -1.6
CPNE4-210ENST00000512332 A6NN06 94 aa5.05□□□□□ -1.6
CPNE4-210ENST00000512332 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
CPNE4-210ENST00000512332 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
CPNE4-210ENST00000512332 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
CPNE4-210ENST00000512332 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
CPNE4-210ENST00000512332 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
CPNE4-210ENST00000512332 UQCR11O14957 56 aa4.99□□□□□ -1.61
CPNE4-210ENST00000512332 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
CPNE4-210ENST00000512332 Q8N1X5 172 aa4.99□□□□□ -1.61
CPNE4-210ENST00000512332 FAT1Q14517 4588 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms