RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 BPY2O14599 106 aa5.64□□□□□ -1.51
PDGFRA-209ENST00000512143 DEFB116Q30KQ4 102 aa5.64□□□□□ -1.51
PDGFRA-209ENST00000512143 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
PDGFRA-209ENST00000512143 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
PDGFRA-209ENST00000512143 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
PDGFRA-209ENST00000512143 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
PDGFRA-209ENST00000512143 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
PDGFRA-209ENST00000512143 A8MWP4 228 aa5.61□□□□□ -1.51
PDGFRA-209ENST00000512143 HERC1Q15751 4861 aa5.6□□□□□ -1.51
PDGFRA-209ENST00000512143 K7EQZ3 153 aa5.59□□□□□ -1.51
PDGFRA-209ENST00000512143 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
PDGFRA-209ENST00000512143 XP32Q5T750 250 aa5.58□□□□□ -1.52
PDGFRA-209ENST00000512143 Q8N9L7 120 aa5.58□□□□□ -1.52
PDGFRA-209ENST00000512143 IMUPQ9GZP8 106 aa5.58□□□□□ -1.52
PDGFRA-209ENST00000512143 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
PDGFRA-209ENST00000512143 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
PDGFRA-209ENST00000512143 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
PDGFRA-209ENST00000512143 NDUFB1O75438 58 aa5.55□□□□□ -1.52
PDGFRA-209ENST00000512143 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
PDGFRA-209ENST00000512143 A0A087WVE0 104 aa5.53□□□□□ -1.52
PDGFRA-209ENST00000512143 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
PDGFRA-209ENST00000512143 IGHV6-1A0A0B4J1U7 121 aa5.52□□□□□ -1.53
PDGFRA-209ENST00000512143 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
PDGFRA-209ENST00000512143 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
PDGFRA-209ENST00000512143 C8orf17Q9NRJ1 99 aa5.52□□□□□ -1.53
PDGFRA-209ENST00000512143 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
PDGFRA-209ENST00000512143 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
PDGFRA-209ENST00000512143 LINC00313P59037 77 aa5.5□□□□□ -1.53
PDGFRA-209ENST00000512143 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
PDGFRA-209ENST00000512143 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
PDGFRA-209ENST00000512143 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
PDGFRA-209ENST00000512143 hDV103S1A0JD37 113 aa5.47□□□□□ -1.53
PDGFRA-209ENST00000512143 PRR4Q16378 134 aa5.47□□□□□ -1.53
PDGFRA-209ENST00000512143 CASC2Q6XLA1 102 aa5.47□□□□□ -1.53
PDGFRA-209ENST00000512143 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
PDGFRA-209ENST00000512143 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
PDGFRA-209ENST00000512143 LPAP08519 4548 aa5.46□□□□□ -1.54
PDGFRA-209ENST00000512143 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-209ENST00000512143 MRPL34Q9BQ48 92 aaKnown RBP5.45□□□□□ -1.54
PDGFRA-209ENST00000512143 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
PDGFRA-209ENST00000512143 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
PDGFRA-209ENST00000512143 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
PDGFRA-209ENST00000512143 TPRXLQ17RH7 258 aa5.44□□□□□ -1.54
PDGFRA-209ENST00000512143 LRP2P98164 4655 aa5.44□□□□□ -1.54
PDGFRA-209ENST00000512143 SCGB1A1P11684 91 aa5.43□□□□□ -1.54
PDGFRA-209ENST00000512143 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
PDGFRA-209ENST00000512143 A8MUU9 505 aa5.41□□□□□ -1.54
PDGFRA-209ENST00000512143 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
PDGFRA-209ENST00000512143 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
PDGFRA-209ENST00000512143 ATOX1O00244 68 aa5.38□□□□□ -1.55
PDGFRA-209ENST00000512143 Q75L30 129 aa5.38□□□□□ -1.55
PDGFRA-209ENST00000512143 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
PDGFRA-209ENST00000512143 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
PDGFRA-209ENST00000512143 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
PDGFRA-209ENST00000512143 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
PDGFRA-209ENST00000512143 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
PDGFRA-209ENST00000512143 UQCRQO14949 82 aa5.34□□□□□ -1.55
PDGFRA-209ENST00000512143 NDUFS5O43920 106 aa5.34□□□□□ -1.55
PDGFRA-209ENST00000512143 Q5W150 140 aa5.34□□□□□ -1.55
PDGFRA-209ENST00000512143 SERP2Q8N6R1 65 aa5.33□□□□□ -1.56
PDGFRA-209ENST00000512143 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
PDGFRA-209ENST00000512143 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
PDGFRA-209ENST00000512143 PCP4P48539 62 aa5.31□□□□□ -1.56
PDGFRA-209ENST00000512143 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
PDGFRA-209ENST00000512143 TRAV22A0A0B4J277 110 aa5.29□□□□□ -1.56
PDGFRA-209ENST00000512143 ANAPC13Q9BS18 74 aa5.29□□□□□ -1.56
PDGFRA-209ENST00000512143 COX7CP15954 63 aa5.28□□□□□ -1.56
PDGFRA-209ENST00000512143 ATP11AUNQ6ZP68 121 aa5.27□□□□□ -1.57
PDGFRA-209ENST00000512143 H0Y9P7 68 aa5.26□□□□□ -1.57
PDGFRA-209ENST00000512143 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
PDGFRA-209ENST00000512143 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
PDGFRA-209ENST00000512143 H3BPC8 53 aa5.25□□□□□ -1.57
PDGFRA-209ENST00000512143 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
PDGFRA-209ENST00000512143 A0A0U1RQV1 116 aa5.24□□□□□ -1.57
PDGFRA-209ENST00000512143 MP68P56378 58 aa5.24□□□□□ -1.57
PDGFRA-209ENST00000512143 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-209ENST00000512143 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
PDGFRA-209ENST00000512143 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
PDGFRA-209ENST00000512143 LOC101927531A0A1B0GV80 90 aa5.22□□□□□ -1.57
PDGFRA-209ENST00000512143 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
PDGFRA-209ENST00000512143 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
PDGFRA-209ENST00000512143 KLKP1Q107X0 134 aa5.21□□□□□ -1.58
PDGFRA-209ENST00000512143 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
PDGFRA-209ENST00000512143 CYP4F30PQ9H0H9 118 aa5.21□□□□□ -1.58
PDGFRA-209ENST00000512143 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
PDGFRA-209ENST00000512143 SPINK7P58062 85 aa5.19□□□□□ -1.58
PDGFRA-209ENST00000512143 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
PDGFRA-209ENST00000512143 C7orf65Q6ZTY9 151 aa5.18□□□□□ -1.58
PDGFRA-209ENST00000512143 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
PDGFRA-209ENST00000512143 IGKV2D-30A0A075B6S6 120 aa5.17□□□□□ -1.58
PDGFRA-209ENST00000512143 CYSTM1Q9H1C7 97 aa5.17□□□□□ -1.58
PDGFRA-209ENST00000512143 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.59
PDGFRA-209ENST00000512143 MUC2Q02817 5179 aa5.14□□□□□ -1.59
PDGFRA-209ENST00000512143 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
PDGFRA-209ENST00000512143 HRES1P13985 223 aa5.13□□□□□ -1.59
PDGFRA-209ENST00000512143 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
PDGFRA-209ENST00000512143 H7BZZ5 65 aa5.12□□□□□ -1.59
PDGFRA-209ENST00000512143 NDUFC1O43677 76 aa5.12□□□□□ -1.59
PDGFRA-209ENST00000512143 MPLKIPQ8TAP9 179 aa5.12□□□□□ -1.59
PDGFRA-209ENST00000512143 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms